RNA–Protein interactions for RNA: ENST00000517124.1

RNU6-1223P-201, Transcript of RNA, U6 small nuclear 1223, pseudogene, humanhuman

BASIC

Gene RNU6-1223P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1223P-201ENST00000517124 PCF11O94913 1555 aaKnown RBP2.57□□□□□ -2
RNU6-1223P-201ENST00000517124 CAPN15O75808 1086 aa2.57□□□□□ -2
RNU6-1223P-201ENST00000517124 DCAF8L2P0C7V8 631 aa2.57□□□□□ -2
RNU6-1223P-201ENST00000517124 SRCAPQ6ZRS2 3230 aa2.57□□□□□ -2
RNU6-1223P-201ENST00000517124 NCAPD3P42695 1498 aa2.57□□□□□ -2
RNU6-1223P-201ENST00000517124 SCRIBQ14160 1630 aa2.55□□□□□ -2
RNU6-1223P-201ENST00000517124 IQSEC2Q5JU85 1478 aa2.55□□□□□ -2
RNU6-1223P-201ENST00000517124 SNAPC4Q5SXM2 1469 aa2.54□□□□□ -2
RNU6-1223P-201ENST00000517124 CEP164Q9UPV0 1460 aa2.54□□□□□ -2
RNU6-1223P-201ENST00000517124 C19orf67A6NJJ6 358 aa2.54□□□□□ -2
RNU6-1223P-201ENST00000517124 CLASP1Q7Z460 1538 aa2.53□□□□□ -2
RNU6-1223P-201ENST00000517124 GAPVD1Q14C86 1478 aa2.53□□□□□ -2
RNU6-1223P-201ENST00000517124 ABCC10Q5T3U5 1492 aa2.53□□□□□ -2
RNU6-1223P-201ENST00000517124 SETD1AO15047 1707 aaKnown RBP2.53□□□□□ -2
RNU6-1223P-201ENST00000517124 DIP2BQ9P265 1576 aa2.53□□□□□ -2.01
RNU6-1223P-201ENST00000517124 HMGXB3Q12766 1538 aa2.52□□□□□ -2.01
RNU6-1223P-201ENST00000517124 FAM69CQ0P6D2 419 aa2.52□□□□□ -2.01
RNU6-1223P-201ENST00000517124 SPINK5Q9NQ38 1064 aaPredicted RBP2.51□□□□□ -2.01
RNU6-1223P-201ENST00000517124 SYNJ1O43426 1573 aa2.5□□□□□ -2.01
RNU6-1223P-201ENST00000517124 EIF4G3O43432 1585 aaKnown RBP2.5□□□□□ -2.01
RNU6-1223P-201ENST00000517124 SENP3-EIF4A1A0A087X0R7 540 aa2.5□□□□□ -2.01
RNU6-1223P-201ENST00000517124 PTPRMP28827 1452 aa2.5□□□□□ -2.01
RNU6-1223P-201ENST00000517124 PTPRTO14522 1441 aa2.5□□□□□ -2.01
RNU6-1223P-201ENST00000517124 POTEB2H3BUK9 544 aa2.49□□□□□ -2.01
RNU6-1223P-201ENST00000517124 RBM33Q96EV2 1170 aaKnown RBP2.49□□□□□ -2.01
RNU6-1223P-201ENST00000517124 SMARCA4P51532 1647 aa2.49□□□□□ -2.01
RNU6-1223P-201ENST00000517124 MAPKBP1O60336 1514 aa2.48□□□□□ -2.01
RNU6-1223P-201ENST00000517124 ZNF608Q9ULD9 1512 aaPredicted RBP2.48□□□□□ -2.01
RNU6-1223P-201ENST00000517124 ADAMTSL3P82987 1691 aa2.48□□□□□ -2.01
RNU6-1223P-201ENST00000517124 CLCN6P51797 869 aa2.48□□□□□ -2.01
RNU6-1223P-201ENST00000517124 STRCQ7RTU9 1775 aa2.48□□□□□ -2.01
RNU6-1223P-201ENST00000517124 CFAP43Q8NDM7 1665 aa2.47□□□□□ -2.01
RNU6-1223P-201ENST00000517124 FBLN2P98095 1184 aa2.47□□□□□ -2.01
RNU6-1223P-201ENST00000517124 PLPPR3Q6T4P5 718 aa2.47□□□□□ -2.01
RNU6-1223P-201ENST00000517124 UPF1Q92900 1129 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNU6-1223P-201ENST00000517124 AKT1S1Q96B36 256 aa2.47□□□□□ -2.01
RNU6-1223P-201ENST00000517124 PPRC1Q5VV67 1664 aaKnown RBP2.47□□□□□ -2.01
RNU6-1223P-201ENST00000517124 KIF21BO75037 1637 aa2.46□□□□□ -2.02
RNU6-1223P-201ENST00000517124 IFT140Q96RY7 1462 aa2.46□□□□□ -2.02
RNU6-1223P-201ENST00000517124 ATAD2BQ9ULI0 1458 aa2.46□□□□□ -2.02
RNU6-1223P-201ENST00000517124 YY1P25490 414 aa2.46□□□□□ -2.02
RNU6-1223P-201ENST00000517124 HSPA2P54652 639 aa2.46□□□□□ -2.02
RNU6-1223P-201ENST00000517124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.46□□□□□ -2.02
RNU6-1223P-201ENST00000517124 LRP5O75197 1615 aa2.46□□□□□ -2.02
RNU6-1223P-201ENST00000517124 UBAP1LF5GYI3 381 aa2.45□□□□□ -2.02
RNU6-1223P-201ENST00000517124 HSPA1LP34931 641 aa2.45□□□□□ -2.02
RNU6-1223P-201ENST00000517124 DCBLD2Q96PD2 775 aa2.45□□□□□ -2.02
RNU6-1223P-201ENST00000517124 RGS17Q9UGC6 210 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1223P-201ENST00000517124 CADPSQ9ULU8 1353 aa2.44□□□□□ -2.02
RNU6-1223P-201ENST00000517124 YEATS2Q9ULM3 1422 aa2.43□□□□□ -2.02
RNU6-1223P-201ENST00000517124 URB2Q14146 1524 aaKnown RBP2.43□□□□□ -2.02
RNU6-1223P-201ENST00000517124 ZRANB1Q9UGI0 708 aa2.43□□□□□ -2.02
RNU6-1223P-201ENST00000517124 FANCD2Q9BXW9 1451 aa2.43□□□□□ -2.02
RNU6-1223P-201ENST00000517124 BAZ1BQ9UIG0 1483 aaKnown RBP2.43□□□□□ -2.02
RNU6-1223P-201ENST00000517124 SETBP1Q9Y6X0 1596 aa2.43□□□□□ -2.02
RNU6-1223P-201ENST00000517124 PREX1Q8TCU6 1659 aa2.43□□□□□ -2.02
RNU6-1223P-201ENST00000517124 RAPGEF6Q8TEU7 1601 aa2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 MADDQ8WXG6 1647 aa2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 BCORL1Q5H9F3 1711 aa2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 RIMS1Q86UR5 1692 aaKnown RBP2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 COL17A1Q9UMD9 1497 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 NPM1P06748 294 aaKnown RBP eCLIP2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 MAMSTRQ6ZN01 415 aa2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 REM2Q8IYK8 340 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1223P-201ENST00000517124 CEP350Q5VT06 3117 aa2.41□□□□□ -2.02
RNU6-1223P-201ENST00000517124 PRELPP51888 382 aa2.41□□□□□ -2.02
RNU6-1223P-201ENST00000517124 C1QTNF8P60827 252 aa2.41□□□□□ -2.02
RNU6-1223P-201ENST00000517124 POTEAQ6S8J7 498 aa2.41□□□□□ -2.02
RNU6-1223P-201ENST00000517124 CHMP7Q8WUX9 453 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1223P-201ENST00000517124 GLI2P10070 1586 aa2.4□□□□□ -2.03
RNU6-1223P-201ENST00000517124 TEX14Q8IWB6 1497 aa2.39□□□□□ -2.03
RNU6-1223P-201ENST00000517124 PITPNM1O00562 1244 aa2.39□□□□□ -2.03
RNU6-1223P-201ENST00000517124 ABCB7O75027 752 aa2.39□□□□□ -2.03
RNU6-1223P-201ENST00000517124 AQRO60306 1485 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU6-1223P-201ENST00000517124 MAP3K4Q9Y6R4 1608 aa2.39□□□□□ -2.03
RNU6-1223P-201ENST00000517124 KIAA0586Q9BVV6 1533 aa2.38□□□□□ -2.03
RNU6-1223P-201ENST00000517124 PRDM2Q13029 1718 aa2.38□□□□□ -2.03
RNU6-1223P-201ENST00000517124 CEP170Q5SW79 1584 aa2.38□□□□□ -2.03
RNU6-1223P-201ENST00000517124 RNF216Q9NWF9 866 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1223P-201ENST00000517124 TARBP1Q13395 1621 aaKnown RBP2.38□□□□□ -2.03
RNU6-1223P-201ENST00000517124 SETD1BQ9UPS6 1966 aaKnown RBP2.38□□□□□ -2.03
RNU6-1223P-201ENST00000517124 CHD4Q14839 1912 aa2.37□□□□□ -2.03
RNU6-1223P-201ENST00000517124 TOM1O60784 492 aa2.37□□□□□ -2.03
RNU6-1223P-201ENST00000517124 PIP4K2BP78356 416 aa2.37□□□□□ -2.03
RNU6-1223P-201ENST00000517124 SHROOM2Q13796 1616 aa2.37□□□□□ -2.03
RNU6-1223P-201ENST00000517124 ADCY10Q96PN6 1610 aa2.37□□□□□ -2.03
RNU6-1223P-201ENST00000517124 MAGI1Q96QZ7 1491 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1223P-201ENST00000517124 KIAA0556O60303 1618 aa2.36□□□□□ -2.03
RNU6-1223P-201ENST00000517124 NHSL1Q5SYE7 1610 aa2.36□□□□□ -2.03
RNU6-1223P-201ENST00000517124 PEG3Q9GZU2 1588 aa2.36□□□□□ -2.03
RNU6-1223P-201ENST00000517124 WDR97A6NE52 1622 aa2.35□□□□□ -2.03
RNU6-1223P-201ENST00000517124 ZNF784Q8NCA9 323 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1223P-201ENST00000517124 FER1L4A9Z1Z3 1794 aa2.35□□□□□ -2.03
RNU6-1223P-201ENST00000517124 CDK12Q9NYV4 1490 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1223P-201ENST00000517124 DCAF1Q9Y4B6 1507 aa2.34□□□□□ -2.03
RNU6-1223P-201ENST00000517124 XP32Q5T750 250 aa2.34□□□□□ -2.03
RNU6-1223P-201ENST00000517124 ZNF219Q9P2Y4 722 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1223P-201ENST00000517124 PLB1Q6P1J6 1458 aa2.33□□□□□ -2.04
RNU6-1223P-201ENST00000517124 TTC37Q6PGP7 1564 aa2.33□□□□□ -2.04
RNU6-1223P-201ENST00000517124 TNS4Q8IZW8 715 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms