RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.88□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 DNMBPQ6XZF7 1577 aa4.87□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 HNRNPUL2Q1KMD3 747 aaKnown RBP4.87□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 ARHGAP35Q9NRY4 1499 aa4.87□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 TTBK1Q5TCY1 1321 aaPredicted RBP4.86□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 CADPSQ9ULU8 1353 aa4.85□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 FMN1Q68DA7 1419 aa4.85□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 LRRC9Q6ZRR7 1453 aa4.85□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 WDR97A6NE52 1622 aa4.84□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 PCF11O94913 1555 aaKnown RBP4.84□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 LAMC3Q9Y6N6 1575 aa4.84□□□□□ -1.63
RNU4ATAC3P-201ENST00000516699 SUPT6HQ7KZ85 1726 aaKnown RBP4.83□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 ABCA10Q8WWZ4 1543 aa4.83□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 FGD5Q6ZNL6 1462 aa4.83□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 SETD5Q9C0A6 1442 aa4.83□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 CARMIL1Q5VZK9 1371 aa4.83□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 CCDC18Q5T9S5 1454 aa4.82□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 CASKIN1Q8WXD9 1431 aa4.82□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 EHBP1L1Q8N3D4 1523 aa4.82□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 GCC2Q8IWJ2 1684 aa4.81□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 MIER1Q8N108 512 aa4.81□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 SAMD9Q5K651 1589 aa4.81□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 MAPKBP1O60336 1514 aa4.81□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 FANCD2Q9BXW9 1451 aa4.81□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 IGF1RP08069 1367 aa4.8□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 RAB3GAP2Q9H2M9 1393 aa4.8□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 HECW1Q76N89 1606 aa4.8□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 YTHDC1Q96MU7 727 aaKnown RBP4.8□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 AKNAQ7Z591 1439 aa4.8□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 ABCA5Q8WWZ7 1642 aa4.79□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 TOPBP1Q92547 1522 aa4.78□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 POLR1AO95602 1720 aaPredicted RBP4.78□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 NEFLP07196 543 aa4.78□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 HFM1A2PYH4 1435 aa4.78□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 UACAQ9BZF9 1416 aa4.78□□□□□ -1.64
RNU4ATAC3P-201ENST00000516699 POLA1P09884 1462 aaPredicted RBP4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 PTPN23Q9H3S7 1636 aa4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 CCER2I3L3R5 266 aa4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 KANK4Q5T7N3 995 aaPredicted RBP4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 FGD6Q6ZV73 1430 aa4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 MTUS2Q5JR59 1369 aa4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 TONSLQ96HA7 1378 aa4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 PBRM1Q86U86 1689 aa4.77□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 SNAPC4Q5SXM2 1469 aa4.76□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 RANGAP1P46060 587 aaPredicted RBP4.76□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 MYOM3Q5VTT5 1437 aa4.76□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 PHLDB1Q86UU1 1377 aa4.76□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 PDS5BQ9NTI5 1447 aa4.75□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 ANP32CO43423 234 aa4.75□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 ITSN2Q9NZM3 1697 aa4.75□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 MIA2Q96PC5 1412 aa4.74□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 UGGT2Q9NYU1 1516 aa4.74□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 SUPT16HQ9Y5B9 1047 aaKnown RBP4.74□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 GRIN2BQ13224 1484 aa4.74□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 TCOF1Q13428 1488 aaKnown RBP4.74□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 GAPVD1Q14C86 1478 aa4.74□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 IQGAP2Q13576 1575 aa4.74□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 FHOD3Q2V2M9 1422 aa4.73□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 ARHGEF11O15085 1522 aa4.73□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 NESP48681 1621 aa4.73□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 FAM50AQ14320 339 aaKnown RBP4.73□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 ERICH6BQ5W0A0 696 aa4.73□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 NCOA2Q15596 1464 aa4.73□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 ADGBQ8N7X0 1667 aa4.73□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 LRRIQ1Q96JM4 1722 aa4.72□□□□□ -1.65
RNU4ATAC3P-201ENST00000516699 ADAMTS12P58397 1594 aa4.71□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 ROCK1Q13464 1354 aa4.7□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 ITGAEP38570 1179 aa4.7□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 MYT1LQ9UL68 1186 aa4.7□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 DNMT1P26358 1616 aaKnown RBP4.7□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 TARBP1Q13395 1621 aaKnown RBP4.7□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 NAIPQ13075 1403 aa4.7□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 ADCY10Q96PN6 1610 aa4.69□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 WDR62O43379 1518 aa4.69□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 URB2Q14146 1524 aaKnown RBP4.69□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 MSH5O43196 834 aa4.69□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 PPP1R15AO75807 674 aaPredicted RBP4.69□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 CROCC2H7BZ55 1655 aa4.69□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 RAD54L2Q9Y4B4 1467 aa4.69□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 EPRSP07814 1512 aaKnown RBP4.68□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 CDK11AQ9UQ88 783 aaPredicted RBP4.68□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 KIAA0556O60303 1618 aa4.68□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 KIF14Q15058 1648 aa4.68□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 CNTLNQ9NXG0 1405 aa4.67□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 ATP1B4Q9UN42 357 aaPredicted RBP4.67□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 RAPGEF6Q8TEU7 1601 aa4.67□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 MRC2Q9UBG0 1479 aa4.67□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 EIF4G2P78344 907 aaKnown RBP eCLIP4.66□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 DDX10Q13206 875 aaKnown RBP4.66□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 ANP32EQ9BTT0 268 aa4.66□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 IFT140Q96RY7 1462 aa4.66□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 ARID4BQ4LE39 1312 aaPredicted RBP4.66□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 ROCK2O75116 1388 aaKnown RBP4.65□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 KTN1Q86UP2 1357 aaKnown RBP4.65□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 RPRD2Q5VT52 1461 aaKnown RBP4.65□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 SHANK2Q9UPX8 1470 aa4.65□□□□□ -1.66
RNU4ATAC3P-201ENST00000516699 KIAA0586Q9BVV6 1533 aa4.65□□□□□ -1.67
RNU4ATAC3P-201ENST00000516699 ARHGEF12Q9NZN5 1544 aa4.65□□□□□ -1.67
RNU4ATAC3P-201ENST00000516699 ADGRL2O95490 1459 aa4.64□□□□□ -1.67
RNU4ATAC3P-201ENST00000516699 MAGI1Q96QZ7 1491 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms