RNA–Protein interactions for RNA: ENST00000516483.1

RN7SKP238-201, Transcript of RNA, 7SK small nuclear pseudogene 238, humanhuman

BASIC

Gene RN7SKP238, Length 249 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP238-201ENST00000516483 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
RN7SKP238-201ENST00000516483 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
RN7SKP238-201ENST00000516483 CUL7Q14999 1698 aa10.44□□□□□ -0.74
RN7SKP238-201ENST00000516483 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
RN7SKP238-201ENST00000516483 KIAA0586Q9BVV6 1533 aa10.39□□□□□ -0.75
RN7SKP238-201ENST00000516483 IQGAP2Q13576 1575 aa10.35□□□□□ -0.75
RN7SKP238-201ENST00000516483 ADCY10Q96PN6 1610 aa10.35□□□□□ -0.75
RN7SKP238-201ENST00000516483 RAPGEF2Q9Y4G8 1499 aa10.34□□□□□ -0.75
RN7SKP238-201ENST00000516483 NPM1P06748 294 aaKnown RBP eCLIP10.32□□□□□ -0.76
RN7SKP238-201ENST00000516483 FAM9AQ8IZU1 332 aaPredicted RBP10.32□□□□□ -0.76
RN7SKP238-201ENST00000516483 PTPRGP23470 1445 aa10.32□□□□□ -0.76
RN7SKP238-201ENST00000516483 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
RN7SKP238-201ENST00000516483 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
RN7SKP238-201ENST00000516483 CARMIL2Q6F5E8 1435 aa10.3□□□□□ -0.76
RN7SKP238-201ENST00000516483 KIF13AQ9H1H9 1805 aa10.3□□□□□ -0.76
RN7SKP238-201ENST00000516483 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
RN7SKP238-201ENST00000516483 DISP1Q96F81 1524 aa10.28□□□□□ -0.76
RN7SKP238-201ENST00000516483 TNIKQ9UKE5 1360 aa10.28□□□□□ -0.76
RN7SKP238-201ENST00000516483 TSPOAP1O95153 1857 aa10.26□□□□□ -0.77
RN7SKP238-201ENST00000516483 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
RN7SKP238-201ENST00000516483 DIP2BQ9P265 1576 aa10.26□□□□□ -0.77
RN7SKP238-201ENST00000516483 KIAA0556O60303 1618 aa10.25□□□□□ -0.77
RN7SKP238-201ENST00000516483 ABCC10Q5T3U5 1492 aa10.25□□□□□ -0.77
RN7SKP238-201ENST00000516483 MAPKBP1O60336 1514 aa10.25□□□□□ -0.77
RN7SKP238-201ENST00000516483 UGGT2Q9NYU1 1516 aa10.25□□□□□ -0.77
RN7SKP238-201ENST00000516483 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
RN7SKP238-201ENST00000516483 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
RN7SKP238-201ENST00000516483 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
RN7SKP238-201ENST00000516483 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
RN7SKP238-201ENST00000516483 ABCC2Q92887 1545 aa10.23□□□□□ -0.77
RN7SKP238-201ENST00000516483 ASXL2Q76L83 1435 aa10.22□□□□□ -0.77
RN7SKP238-201ENST00000516483 PLB1Q6P1J6 1458 aa10.22□□□□□ -0.77
RN7SKP238-201ENST00000516483 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
RN7SKP238-201ENST00000516483 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
RN7SKP238-201ENST00000516483 AEBP2Q6ZN18 517 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP238-201ENST00000516483 UHRF1BP1LA0JNW5 1464 aa10.17□□□□□ -0.78
RN7SKP238-201ENST00000516483 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
RN7SKP238-201ENST00000516483 CHIC1Q5VXU3 224 aa10.16□□□□□ -0.78
RN7SKP238-201ENST00000516483 KCNH8Q96L42 1107 aa10.16□□□□□ -0.78
RN7SKP238-201ENST00000516483 KDM6BO15054 1643 aa10.15□□□□□ -0.78
RN7SKP238-201ENST00000516483 KDM5BQ9UGL1 1544 aa10.15□□□□□ -0.78
RN7SKP238-201ENST00000516483 EPRSP07814 1512 aaKnown RBP10.13□□□□□ -0.79
RN7SKP238-201ENST00000516483 FHOD3Q2V2M9 1422 aa10.13□□□□□ -0.79
RN7SKP238-201ENST00000516483 ABCA8O94911 1581 aa10.13□□□□□ -0.79
RN7SKP238-201ENST00000516483 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
RN7SKP238-201ENST00000516483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
RN7SKP238-201ENST00000516483 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
RN7SKP238-201ENST00000516483 EEA1Q15075 1411 aa10.12□□□□□ -0.79
RN7SKP238-201ENST00000516483 PPRC1Q5VV67 1664 aaKnown RBP10.12□□□□□ -0.79
RN7SKP238-201ENST00000516483 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
RN7SKP238-201ENST00000516483 SAMD9Q5K651 1589 aa10.09□□□□□ -0.79
RN7SKP238-201ENST00000516483 GLI2P10070 1586 aa10.09□□□□□ -0.79
RN7SKP238-201ENST00000516483 KIF21BO75037 1637 aa10.08□□□□□ -0.8
RN7SKP238-201ENST00000516483 MAP3K4Q9Y6R4 1608 aa10.08□□□□□ -0.8
RN7SKP238-201ENST00000516483 RAPGEF6Q8TEU7 1601 aa10.07□□□□□ -0.8
RN7SKP238-201ENST00000516483 ATP10BO94823 1461 aa10.06□□□□□ -0.8
RN7SKP238-201ENST00000516483 COL17A1Q9UMD9 1497 aaPredicted RBP10.06□□□□□ -0.8
RN7SKP238-201ENST00000516483 ATP1B4Q9UN42 357 aaPredicted RBP10.06□□□□□ -0.8
RN7SKP238-201ENST00000516483 CD109Q6YHK3 1445 aa10.05□□□□□ -0.8
RN7SKP238-201ENST00000516483 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
RN7SKP238-201ENST00000516483 TEX14Q8IWB6 1497 aa10.04□□□□□ -0.8
RN7SKP238-201ENST00000516483 CFAP43Q8NDM7 1665 aa10.02□□□□□ -0.81
RN7SKP238-201ENST00000516483 KDM4FA0A1W2PPD8 638 aa10.01□□□□□ -0.81
RN7SKP238-201ENST00000516483 CDK13Q14004 1512 aaKnown RBP10.01□□□□□ -0.81
RN7SKP238-201ENST00000516483 EFCAB5A4FU69 1503 aa10□□□□□ -0.81
RN7SKP238-201ENST00000516483 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
RN7SKP238-201ENST00000516483 MAGI3Q5TCQ9 1506 aa9.98□□□□□ -0.81
RN7SKP238-201ENST00000516483 ADGRL1O94910 1474 aa9.98□□□□□ -0.81
RN7SKP238-201ENST00000516483 ABCA9Q8IUA7 1624 aa9.96□□□□□ -0.81
RN7SKP238-201ENST00000516483 PLEKHD1A6NEE1 506 aa9.96□□□□□ -0.82
RN7SKP238-201ENST00000516483 RAPGEF3O95398 923 aa9.96□□□□□ -0.82
RN7SKP238-201ENST00000516483 TTC37Q6PGP7 1564 aa9.95□□□□□ -0.82
RN7SKP238-201ENST00000516483 HECW1Q76N89 1606 aa9.93□□□□□ -0.82
RN7SKP238-201ENST00000516483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.92□□□□□ -0.82
RN7SKP238-201ENST00000516483 FMN1Q68DA7 1419 aa9.92□□□□□ -0.82
RN7SKP238-201ENST00000516483 PCF11O94913 1555 aaKnown RBP9.91□□□□□ -0.82
RN7SKP238-201ENST00000516483 ARAP3Q8WWN8 1544 aa9.9□□□□□ -0.82
RN7SKP238-201ENST00000516483 FANCAO15360 1455 aa9.9□□□□□ -0.83
RN7SKP238-201ENST00000516483 KIF14Q15058 1648 aa9.89□□□□□ -0.83
RN7SKP238-201ENST00000516483 FRMPD1Q5SYB0 1578 aa9.89□□□□□ -0.83
RN7SKP238-201ENST00000516483 ARID4BQ4LE39 1312 aaPredicted RBP9.89□□□□□ -0.83
RN7SKP238-201ENST00000516483 PLPPR3Q6T4P5 718 aa9.89□□□□□ -0.83
RN7SKP238-201ENST00000516483 LRRIQ1Q96JM4 1722 aa9.89□□□□□ -0.83
RN7SKP238-201ENST00000516483 CLIP1P30622 1438 aa9.89□□□□□ -0.83
RN7SKP238-201ENST00000516483 NEO1Q92859 1461 aa9.88□□□□□ -0.83
RN7SKP238-201ENST00000516483 AKNAQ7Z591 1439 aa9.88□□□□□ -0.83
RN7SKP238-201ENST00000516483 DENND4BO75064 1496 aaPredicted RBP9.85□□□□□ -0.83
RN7SKP238-201ENST00000516483 CDK11AQ9UQ88 783 aaPredicted RBP9.85□□□□□ -0.83
RN7SKP238-201ENST00000516483 CFAP74Q9C0B2 1584 aa9.84□□□□□ -0.83
RN7SKP238-201ENST00000516483 TROQ12816 1431 aaPredicted RBP9.84□□□□□ -0.83
RN7SKP238-201ENST00000516483 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.83
RN7SKP238-201ENST00000516483 MLECQ14165 292 aa9.84□□□□□ -0.83
RN7SKP238-201ENST00000516483 PHLDB1Q86UU1 1377 aa9.84□□□□□ -0.83
RN7SKP238-201ENST00000516483 RICTORQ6R327 1708 aa9.84□□□□□ -0.83
RN7SKP238-201ENST00000516483 MYO5CQ9NQX4 1742 aa9.84□□□□□ -0.83
RN7SKP238-201ENST00000516483 CASKIN1Q8WXD9 1431 aa9.83□□□□□ -0.84
RN7SKP238-201ENST00000516483 SCAPERQ9BY12 1400 aa9.83□□□□□ -0.84
RN7SKP238-201ENST00000516483 YEATS2Q9ULM3 1422 aa9.83□□□□□ -0.84
RN7SKP238-201ENST00000516483 ARHGEF40Q8TER5 1519 aa9.83□□□□□ -0.84
RN7SKP238-201ENST00000516483 MYT1LQ9UL68 1186 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms