RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 VPS8Q8N3P4 1428 aa12.01□□□□□ -0.49
SCARNA20.1-201ENST00000516009 GRIN2AQ12879 1464 aa12.01□□□□□ -0.49
SCARNA20.1-201ENST00000516009 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
SCARNA20.1-201ENST00000516009 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
SCARNA20.1-201ENST00000516009 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
SCARNA20.1-201ENST00000516009 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
SCARNA20.1-201ENST00000516009 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
SCARNA20.1-201ENST00000516009 CHD1O14646 1710 aa11.94□□□□□ -0.5
SCARNA20.1-201ENST00000516009 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
SCARNA20.1-201ENST00000516009 KIAA0586Q9BVV6 1533 aa11.93□□□□□ -0.5
SCARNA20.1-201ENST00000516009 FBLN2P98095 1184 aa11.93□□□□□ -0.5
SCARNA20.1-201ENST00000516009 NUP160Q12769 1436 aa11.91□□□□□ -0.5
SCARNA20.1-201ENST00000516009 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
SCARNA20.1-201ENST00000516009 UGGT2Q9NYU1 1516 aa11.91□□□□□ -0.5
SCARNA20.1-201ENST00000516009 APLP2Q06481 763 aa11.9□□□□□ -0.5
SCARNA20.1-201ENST00000516009 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
SCARNA20.1-201ENST00000516009 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
SCARNA20.1-201ENST00000516009 PPARGC1BQ86YN6 1023 aaKnown RBP11.88□□□□□ -0.51
SCARNA20.1-201ENST00000516009 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
SCARNA20.1-201ENST00000516009 PCF11O94913 1555 aaKnown RBP11.87□□□□□ -0.51
SCARNA20.1-201ENST00000516009 KIAA0556O60303 1618 aa11.86□□□□□ -0.51
SCARNA20.1-201ENST00000516009 FYCO1Q9BQS8 1478 aa11.85□□□□□ -0.51
SCARNA20.1-201ENST00000516009 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
SCARNA20.1-201ENST00000516009 CASKIN1Q8WXD9 1431 aa11.84□□□□□ -0.51
SCARNA20.1-201ENST00000516009 DISP1Q96F81 1524 aa11.83□□□□□ -0.52
SCARNA20.1-201ENST00000516009 CFAP43Q8NDM7 1665 aa11.83□□□□□ -0.52
SCARNA20.1-201ENST00000516009 MAP3K1Q13233 1512 aa11.82□□□□□ -0.52
SCARNA20.1-201ENST00000516009 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
SCARNA20.1-201ENST00000516009 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
SCARNA20.1-201ENST00000516009 CARMIL2Q6F5E8 1435 aa11.8□□□□□ -0.52
SCARNA20.1-201ENST00000516009 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
SCARNA20.1-201ENST00000516009 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
SCARNA20.1-201ENST00000516009 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
SCARNA20.1-201ENST00000516009 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
SCARNA20.1-201ENST00000516009 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
SCARNA20.1-201ENST00000516009 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
SCARNA20.1-201ENST00000516009 KANK4Q5T7N3 995 aaPredicted RBP11.75□□□□□ -0.53
SCARNA20.1-201ENST00000516009 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
SCARNA20.1-201ENST00000516009 PRG4Q92954 1404 aaPredicted RBP11.74□□□□□ -0.53
SCARNA20.1-201ENST00000516009 CCDC18Q5T9S5 1454 aa11.74□□□□□ -0.53
SCARNA20.1-201ENST00000516009 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
SCARNA20.1-201ENST00000516009 EPRSP07814 1512 aaKnown RBP11.7□□□□□ -0.54
SCARNA20.1-201ENST00000516009 ABCA8O94911 1581 aa11.68□□□□□ -0.54
SCARNA20.1-201ENST00000516009 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
SCARNA20.1-201ENST00000516009 NUP153P49790 1475 aaKnown RBP11.68□□□□□ -0.54
SCARNA20.1-201ENST00000516009 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
SCARNA20.1-201ENST00000516009 CDK13Q14004 1512 aaKnown RBP11.67□□□□□ -0.54
SCARNA20.1-201ENST00000516009 PLB1Q6P1J6 1458 aa11.67□□□□□ -0.54
SCARNA20.1-201ENST00000516009 PTPRGP23470 1445 aa11.67□□□□□ -0.54
SCARNA20.1-201ENST00000516009 ERCC6L2Q5T890 1561 aa11.67□□□□□ -0.54
SCARNA20.1-201ENST00000516009 SUPT6HQ7KZ85 1726 aaKnown RBP11.66□□□□□ -0.54
SCARNA20.1-201ENST00000516009 RRBP1Q9P2E9 1410 aaKnown RBP11.64□□□□□ -0.55
SCARNA20.1-201ENST00000516009 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
SCARNA20.1-201ENST00000516009 MAGI3Q5TCQ9 1506 aa11.64□□□□□ -0.55
SCARNA20.1-201ENST00000516009 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
SCARNA20.1-201ENST00000516009 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
SCARNA20.1-201ENST00000516009 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
SCARNA20.1-201ENST00000516009 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
SCARNA20.1-201ENST00000516009 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
SCARNA20.1-201ENST00000516009 CCNB3Q8WWL7 1395 aa11.6□□□□□ -0.55
SCARNA20.1-201ENST00000516009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
SCARNA20.1-201ENST00000516009 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
SCARNA20.1-201ENST00000516009 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
SCARNA20.1-201ENST00000516009 ABCC2Q92887 1545 aa11.59□□□□□ -0.55
SCARNA20.1-201ENST00000516009 ATP10BO94823 1461 aa11.57□□□□□ -0.56
SCARNA20.1-201ENST00000516009 ADCY10Q96PN6 1610 aa11.57□□□□□ -0.56
SCARNA20.1-201ENST00000516009 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
SCARNA20.1-201ENST00000516009 MYOM3Q5VTT5 1437 aa11.56□□□□□ -0.56
SCARNA20.1-201ENST00000516009 UHRF1BP1LA0JNW5 1464 aa11.56□□□□□ -0.56
SCARNA20.1-201ENST00000516009 FGD6Q6ZV73 1430 aa11.55□□□□□ -0.56
SCARNA20.1-201ENST00000516009 KIF14Q15058 1648 aa11.53□□□□□ -0.56
SCARNA20.1-201ENST00000516009 ITSN2Q9NZM3 1697 aa11.53□□□□□ -0.56
SCARNA20.1-201ENST00000516009 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
SCARNA20.1-201ENST00000516009 FAM50AQ14320 339 aaKnown RBP11.53□□□□□ -0.56
SCARNA20.1-201ENST00000516009 ZCCHC11Q5TAX3 1644 aaKnown RBP11.53□□□□□ -0.56
SCARNA20.1-201ENST00000516009 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
SCARNA20.1-201ENST00000516009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCARNA20.1-201ENST00000516009 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
SCARNA20.1-201ENST00000516009 MIA2Q96PC5 1412 aa11.5□□□□□ -0.57
SCARNA20.1-201ENST00000516009 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
SCARNA20.1-201ENST00000516009 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
SCARNA20.1-201ENST00000516009 ITGAEP38570 1179 aa11.48□□□□□ -0.57
SCARNA20.1-201ENST00000516009 HRCP23327 699 aa11.47□□□□□ -0.57
SCARNA20.1-201ENST00000516009 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.57
SCARNA20.1-201ENST00000516009 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
SCARNA20.1-201ENST00000516009 MYO5CQ9NQX4 1742 aa11.43□□□□□ -0.58
SCARNA20.1-201ENST00000516009 RIMBP3CA6NJZ7 1639 aa11.43□□□□□ -0.58
SCARNA20.1-201ENST00000516009 RIMBP3BA6NNM3 1639 aa11.43□□□□□ -0.58
SCARNA20.1-201ENST00000516009 PREX2Q70Z35 1606 aa11.43□□□□□ -0.58
SCARNA20.1-201ENST00000516009 RIMBP3Q9UFD9 1639 aa11.43□□□□□ -0.58
SCARNA20.1-201ENST00000516009 CCER1Q8TC90 406 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20.1-201ENST00000516009 TTC37Q6PGP7 1564 aa11.42□□□□□ -0.58
SCARNA20.1-201ENST00000516009 CFDP1Q9UEE9 299 aaPredicted RBP11.42□□□□□ -0.58
SCARNA20.1-201ENST00000516009 CDC42BPBQ9Y5S2 1711 aa11.42□□□□□ -0.58
SCARNA20.1-201ENST00000516009 DNMT1P26358 1616 aaKnown RBP11.42□□□□□ -0.58
SCARNA20.1-201ENST00000516009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.41□□□□□ -0.58
SCARNA20.1-201ENST00000516009 CAMSAP2Q08AD1 1489 aa11.41□□□□□ -0.58
SCARNA20.1-201ENST00000516009 WDR7Q9Y4E6 1490 aa11.4□□□□□ -0.58
SCARNA20.1-201ENST00000516009 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
SCARNA20.1-201ENST00000516009 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms