RNA–Protein interactions for RNA: ENST00000515795.1

FAM20C-205, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 1 (best)

Gene FAM20C, Length 2,177 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-205ENST00000515795 LRRC9Q6ZRR7 1453 aa29.67■■■□□ 2.34
FAM20C-205ENST00000515795 URB2Q14146 1524 aaKnown RBP29.67■■■□□ 2.34
FAM20C-205ENST00000515795 ITGAEP38570 1179 aa29.65■■■□□ 2.34
FAM20C-205ENST00000515795 NEUROD1Q13562 356 aa29.64■■■□□ 2.34
FAM20C-205ENST00000515795 PCF11O94913 1555 aaKnown RBP29.63■■■□□ 2.33
FAM20C-205ENST00000515795 CENPBP07199 599 aaPredicted RBP29.62■■■□□ 2.33
FAM20C-205ENST00000515795 EFCAB5A4FU69 1503 aa29.6■■■□□ 2.33
FAM20C-205ENST00000515795 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
FAM20C-205ENST00000515795 FHOD3Q2V2M9 1422 aa29.59■■■□□ 2.33
FAM20C-205ENST00000515795 CFAP43Q8NDM7 1665 aa29.59■■■□□ 2.33
FAM20C-205ENST00000515795 CTTNBP2Q8WZ74 1663 aa29.58■■■□□ 2.33
FAM20C-205ENST00000515795 ATP1B4Q9UN42 357 aaPredicted RBP29.57■■■□□ 2.32
FAM20C-205ENST00000515795 PDS5BQ9NTI5 1447 aa29.57■■■□□ 2.32
FAM20C-205ENST00000515795 PHLDB1Q86UU1 1377 aa29.54■■■□□ 2.32
FAM20C-205ENST00000515795 FYCO1Q9BQS8 1478 aa29.52■■■□□ 2.32
FAM20C-205ENST00000515795 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
FAM20C-205ENST00000515795 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
FAM20C-205ENST00000515795 ABCA5Q8WWZ7 1642 aa29.5■■■□□ 2.31
FAM20C-205ENST00000515795 CASKIN1Q8WXD9 1431 aa29.49■■■□□ 2.31
FAM20C-205ENST00000515795 MIER1Q8N108 512 aa29.49■■■□□ 2.31
FAM20C-205ENST00000515795 RAB3GAP2Q9H2M9 1393 aa29.48■■■□□ 2.31
FAM20C-205ENST00000515795 AQRO60306 1485 aaKnown RBP eCLIP29.47■■■□□ 2.312e-6■■■□□ 18.8
FAM20C-205ENST00000515795 GAPVD1Q14C86 1478 aa29.47■■■□□ 2.31
FAM20C-205ENST00000515795 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
FAM20C-205ENST00000515795 FAM50AQ14320 339 aaKnown RBP29.43■■■□□ 2.3
FAM20C-205ENST00000515795 FMN1Q68DA7 1419 aa29.41■■■□□ 2.3
FAM20C-205ENST00000515795 SETD5Q9C0A6 1442 aa29.4■■■□□ 2.3
FAM20C-205ENST00000515795 YTHDC1Q96MU7 727 aaKnown RBP29.33■■■□□ 2.29
FAM20C-205ENST00000515795 SNAPC4Q5SXM2 1469 aa29.33■■■□□ 2.29
FAM20C-205ENST00000515795 SAMD9Q5K651 1589 aa29.32■■■□□ 2.28
FAM20C-205ENST00000515795 GTF3C3Q9Y5Q9 886 aa29.32■■■□□ 2.28
FAM20C-205ENST00000515795 MAPKBP1O60336 1514 aa29.31■■■□□ 2.28
FAM20C-205ENST00000515795 TARBP1Q13395 1621 aaKnown RBP29.3■■■□□ 2.28
FAM20C-205ENST00000515795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.26■■■□□ 2.27
FAM20C-205ENST00000515795 MTUS2Q5JR59 1369 aa29.22■■■□□ 2.27
FAM20C-205ENST00000515795 FGD6Q6ZV73 1430 aa29.19■■■□□ 2.26
FAM20C-205ENST00000515795 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
FAM20C-205ENST00000515795 LRRIQ1Q96JM4 1722 aa29.17■■■□□ 2.26
FAM20C-205ENST00000515795 PBRM1Q86U86 1689 aa29.16■■■□□ 2.26
FAM20C-205ENST00000515795 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
FAM20C-205ENST00000515795 MRC2Q9UBG0 1479 aa29.12■■■□□ 2.25
FAM20C-205ENST00000515795 SIN3AQ96ST3 1273 aa29.08■■■□□ 2.25
FAM20C-205ENST00000515795 NCOA2Q15596 1464 aa29.08■■■□□ 2.25
FAM20C-205ENST00000515795 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
FAM20C-205ENST00000515795 EHBP1L1Q8N3D4 1523 aa29.04■■■□□ 2.24
FAM20C-205ENST00000515795 SUPT6HQ7KZ85 1726 aaKnown RBP29.04■■■□□ 2.24
FAM20C-205ENST00000515795 MYOM3Q5VTT5 1437 aa29.04■■■□□ 2.24
FAM20C-205ENST00000515795 IQGAP2Q13576 1575 aa29.03■■■□□ 2.24
FAM20C-205ENST00000515795 CCDC18Q5T9S5 1454 aa28.99■■■□□ 2.23
FAM20C-205ENST00000515795 TIMELESSQ9UNS1 1208 aa28.99■■■□□ 2.23
FAM20C-205ENST00000515795 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
FAM20C-205ENST00000515795 PELP1Q8IZL8 1130 aaKnown RBP28.98■■■□□ 2.23
FAM20C-205ENST00000515795 HFM1A2PYH4 1435 aa28.96■■■□□ 2.23
FAM20C-205ENST00000515795 HECW1Q76N89 1606 aa28.95■■■□□ 2.22
FAM20C-205ENST00000515795 MAGI3Q5TCQ9 1506 aa28.95■■■□□ 2.22
FAM20C-205ENST00000515795 UGGT2Q9NYU1 1516 aa28.95■■■□□ 2.22
FAM20C-205ENST00000515795 IFT140Q96RY7 1462 aa28.92■■■□□ 2.22
FAM20C-205ENST00000515795 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
FAM20C-205ENST00000515795 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
FAM20C-205ENST00000515795 ZNF608Q9ULD9 1512 aaPredicted RBP28.9■■■□□ 2.22
FAM20C-205ENST00000515795 EPRSP07814 1512 aaKnown RBP28.88■■■□□ 2.21
FAM20C-205ENST00000515795 NAIPQ13075 1403 aa28.87■■■□□ 2.21
FAM20C-205ENST00000515795 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
FAM20C-205ENST00000515795 WDR62O43379 1518 aa28.87■■■□□ 2.21
FAM20C-205ENST00000515795 PPP1R15AO75807 674 aaPredicted RBP28.84■■■□□ 2.21
FAM20C-205ENST00000515795 CDK13Q14004 1512 aaKnown RBP28.81■■■□□ 2.2
FAM20C-205ENST00000515795 TCOF1Q13428 1488 aaKnown RBP28.8■■■□□ 2.2
FAM20C-205ENST00000515795 TONSLQ96HA7 1378 aa28.77■■■□□ 2.2
FAM20C-205ENST00000515795 KIAA0586Q9BVV6 1533 aa28.76■■■□□ 2.2
FAM20C-205ENST00000515795 ARID3CA6NKF2 412 aa28.76■■■□□ 2.19
FAM20C-205ENST00000515795 RRP7BPQ9NSQ0 103 aa28.72■■■□□ 2.19
FAM20C-205ENST00000515795 CHIC2Q9UKJ5 165 aa28.72■■■□□ 2.19
FAM20C-205ENST00000515795 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
FAM20C-205ENST00000515795 MIA2Q96PC5 1412 aa28.71■■■□□ 2.19
FAM20C-205ENST00000515795 KIAA0556O60303 1618 aa28.71■■■□□ 2.19
FAM20C-205ENST00000515795 DDX10Q13206 875 aaKnown RBP28.71■■■□□ 2.19
FAM20C-205ENST00000515795 DISP1Q96F81 1524 aa28.71■■■□□ 2.19
FAM20C-205ENST00000515795 GRIN2AQ12879 1464 aa28.7■■■□□ 2.18
FAM20C-205ENST00000515795 GCC2Q8IWJ2 1684 aa28.67■■■□□ 2.18
FAM20C-205ENST00000515795 ERCC6Q03468 1493 aa28.67■■■□□ 2.18
FAM20C-205ENST00000515795 HIRIP3Q9BW71 556 aaPredicted RBP28.65■■■□□ 2.18
FAM20C-205ENST00000515795 AKNAQ7Z591 1439 aa28.64■■■□□ 2.18
FAM20C-205ENST00000515795 NUP153P49790 1475 aaKnown RBP28.6■■■□□ 2.17
FAM20C-205ENST00000515795 RAPGEF6Q8TEU7 1601 aa28.59■■■□□ 2.17
FAM20C-205ENST00000515795 KCNH8Q96L42 1107 aa28.59■■■□□ 2.17
FAM20C-205ENST00000515795 TRIM52Q96A61 297 aa28.58■■■□□ 2.17
FAM20C-205ENST00000515795 MAGI1Q96QZ7 1491 aaPredicted RBP28.57■■■□□ 2.16
FAM20C-205ENST00000515795 KDM6BO15054 1643 aa28.56■■■□□ 2.16
FAM20C-205ENST00000515795 CHMP7Q8WUX9 453 aaPredicted RBP28.55■■■□□ 2.16
FAM20C-205ENST00000515795 CDK11AQ9UQ88 783 aaPredicted RBP28.54■■■□□ 2.16
FAM20C-205ENST00000515795 DENND4BO75064 1496 aaPredicted RBP28.52■■■□□ 2.16
FAM20C-205ENST00000515795 SYNJ2O15056 1496 aa28.51■■■□□ 2.16
FAM20C-205ENST00000515795 KDM5BQ9UGL1 1544 aa28.5■■■□□ 2.15
FAM20C-205ENST00000515795 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
FAM20C-205ENST00000515795 DAPK1P53355 1430 aa28.5■■■□□ 2.15
FAM20C-205ENST00000515795 MPHOSPH9Q99550 1183 aa28.48■■■□□ 2.15
FAM20C-205ENST00000515795 FBLN2P98095 1184 aa28.47■■■□□ 2.15
FAM20C-205ENST00000515795 ROCK1Q13464 1354 aa28.46■■■□□ 2.15
FAM20C-205ENST00000515795 DNMT1P26358 1616 aaKnown RBP28.45■■■□□ 2.15
FAM20C-205ENST00000515795 ZNF644Q9H582 1327 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms