RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
CSNK1A1-206ENST00000515748 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
CSNK1A1-206ENST00000515748 CUX1P39880 1505 aa16.79■□□□□ 0.28
CSNK1A1-206ENST00000515748 SOCS7O14512 581 aa16.76■□□□□ 0.27
CSNK1A1-206ENST00000515748 TSPOAP1O95153 1857 aa16.75■□□□□ 0.27
CSNK1A1-206ENST00000515748 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
CSNK1A1-206ENST00000515748 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
CSNK1A1-206ENST00000515748 ILDR2Q71H61 639 aa16.71■□□□□ 0.27
CSNK1A1-206ENST00000515748 ABCA5Q8WWZ7 1642 aa16.69■□□□□ 0.26
CSNK1A1-206ENST00000515748 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
CSNK1A1-206ENST00000515748 ADCY10Q96PN6 1610 aa16.63■□□□□ 0.25
CSNK1A1-206ENST00000515748 ADAMTS12P58397 1594 aa16.63■□□□□ 0.25
CSNK1A1-206ENST00000515748 COL17A1Q9UMD9 1497 aaPredicted RBP16.62■□□□□ 0.25
CSNK1A1-206ENST00000515748 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
CSNK1A1-206ENST00000515748 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
CSNK1A1-206ENST00000515748 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
CSNK1A1-206ENST00000515748 TOP2BQ02880 1626 aa16.49■□□□□ 0.23
CSNK1A1-206ENST00000515748 GLI2P10070 1586 aa16.48■□□□□ 0.23
CSNK1A1-206ENST00000515748 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
CSNK1A1-206ENST00000515748 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
CSNK1A1-206ENST00000515748 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
CSNK1A1-206ENST00000515748 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
CSNK1A1-206ENST00000515748 PTPRGP23470 1445 aa16.45■□□□□ 0.22
CSNK1A1-206ENST00000515748 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
CSNK1A1-206ENST00000515748 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
CSNK1A1-206ENST00000515748 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
CSNK1A1-206ENST00000515748 TEX14Q8IWB6 1497 aa16.4■□□□□ 0.22
CSNK1A1-206ENST00000515748 KIAA0586Q9BVV6 1533 aa16.36■□□□□ 0.21
CSNK1A1-206ENST00000515748 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
CSNK1A1-206ENST00000515748 PTPRMP28827 1452 aa16.32■□□□□ 0.2
CSNK1A1-206ENST00000515748 TNIKQ9UKE5 1360 aa16.32■□□□□ 0.2
CSNK1A1-206ENST00000515748 MAP3K4Q9Y6R4 1608 aa16.31■□□□□ 0.2
CSNK1A1-206ENST00000515748 UHRF1BP1LA0JNW5 1464 aa16.28■□□□□ 0.2
CSNK1A1-206ENST00000515748 HSPA2P54652 639 aa16.27■□□□□ 0.2
CSNK1A1-206ENST00000515748 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
CSNK1A1-206ENST00000515748 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
CSNK1A1-206ENST00000515748 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-206ENST00000515748 CUL7Q14999 1698 aa16.24■□□□□ 0.19
CSNK1A1-206ENST00000515748 KDM5BQ9UGL1 1544 aa16.21■□□□□ 0.19
CSNK1A1-206ENST00000515748 KIF21BO75037 1637 aa16.21■□□□□ 0.19
CSNK1A1-206ENST00000515748 CD109Q6YHK3 1445 aa16.2■□□□□ 0.18
CSNK1A1-206ENST00000515748 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
CSNK1A1-206ENST00000515748 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
CSNK1A1-206ENST00000515748 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
CSNK1A1-206ENST00000515748 IGF1RP08069 1367 aa16.18■□□□□ 0.18
CSNK1A1-206ENST00000515748 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
CSNK1A1-206ENST00000515748 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
CSNK1A1-206ENST00000515748 ARID4BQ4LE39 1312 aaPredicted RBP16.15■□□□□ 0.18
CSNK1A1-206ENST00000515748 WDR7Q9Y4E6 1490 aa16.12■□□□□ 0.17
CSNK1A1-206ENST00000515748 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
CSNK1A1-206ENST00000515748 ZCCHC11Q5TAX3 1644 aaKnown RBP16.09■□□□□ 0.17
CSNK1A1-206ENST00000515748 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
CSNK1A1-206ENST00000515748 RAPGEF3O95398 923 aa16.08■□□□□ 0.16
CSNK1A1-206ENST00000515748 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
CSNK1A1-206ENST00000515748 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
CSNK1A1-206ENST00000515748 MADDQ8WXG6 1647 aa16.04■□□□□ 0.16
CSNK1A1-206ENST00000515748 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.16
CSNK1A1-206ENST00000515748 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.15
CSNK1A1-206ENST00000515748 CARMIL1Q5VZK9 1371 aa16.01■□□□□ 0.15
CSNK1A1-206ENST00000515748 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
CSNK1A1-206ENST00000515748 KIF27Q86VH2 1401 aa15.98■□□□□ 0.15
CSNK1A1-206ENST00000515748 IQGAP2Q13576 1575 aa15.97■□□□□ 0.15
CSNK1A1-206ENST00000515748 YEATS2Q9ULM3 1422 aa15.95■□□□□ 0.14
CSNK1A1-206ENST00000515748 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
CSNK1A1-206ENST00000515748 MLECQ14165 292 aa15.88■□□□□ 0.13
CSNK1A1-206ENST00000515748 UGGT2Q9NYU1 1516 aa15.88■□□□□ 0.13
CSNK1A1-206ENST00000515748 POGZQ7Z3K3 1410 aa15.86■□□□□ 0.13
CSNK1A1-206ENST00000515748 CEBPAP49715 358 aaPredicted RBP15.84■□□□□ 0.13
CSNK1A1-206ENST00000515748 NEO1Q92859 1461 aa15.84■□□□□ 0.13
CSNK1A1-206ENST00000515748 KIAA0556O60303 1618 aa15.83■□□□□ 0.13
CSNK1A1-206ENST00000515748 ARID3CA6NKF2 412 aa15.83■□□□□ 0.12
CSNK1A1-206ENST00000515748 STRCQ7RTU9 1775 aa15.82■□□□□ 0.12
CSNK1A1-206ENST00000515748 UBAP1LF5GYI3 381 aa15.81■□□□□ 0.12
CSNK1A1-206ENST00000515748 PTPRTO14522 1441 aa15.81■□□□□ 0.12
CSNK1A1-206ENST00000515748 ABCA8O94911 1581 aa15.79■□□□□ 0.12
CSNK1A1-206ENST00000515748 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
CSNK1A1-206ENST00000515748 IQSEC2Q5JU85 1478 aa15.79■□□□□ 0.12
CSNK1A1-206ENST00000515748 LTBP4Q8N2S1 1624 aa15.79■□□□□ 0.12
CSNK1A1-206ENST00000515748 FANCAO15360 1455 aa15.78■□□□□ 0.12
CSNK1A1-206ENST00000515748 AKNAQ7Z591 1439 aa15.77■□□□□ 0.11
CSNK1A1-206ENST00000515748 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
CSNK1A1-206ENST00000515748 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
CSNK1A1-206ENST00000515748 ATP10BO94823 1461 aa15.75■□□□□ 0.11
CSNK1A1-206ENST00000515748 ABCA9Q8IUA7 1624 aa15.75■□□□□ 0.11
CSNK1A1-206ENST00000515748 ARHGEF40Q8TER5 1519 aa15.74■□□□□ 0.11
CSNK1A1-206ENST00000515748 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
CSNK1A1-206ENST00000515748 FHOD3Q2V2M9 1422 aa15.72■□□□□ 0.11
CSNK1A1-206ENST00000515748 UHRF1BP1Q6BDS2 1440 aa15.72■□□□□ 0.11
CSNK1A1-206ENST00000515748 PREX1Q8TCU6 1659 aa15.72■□□□□ 0.11
CSNK1A1-206ENST00000515748 TTC37Q6PGP7 1564 aa15.71■□□□□ 0.11
CSNK1A1-206ENST00000515748 EEA1Q15075 1411 aa15.71■□□□□ 0.11
CSNK1A1-206ENST00000515748 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.1
CSNK1A1-206ENST00000515748 HSPA1LP34931 641 aa15.7■□□□□ 0.1
CSNK1A1-206ENST00000515748 GOLGA3Q08378 1498 aa15.69■□□□□ 0.1
CSNK1A1-206ENST00000515748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.68■□□□□ 0.1
CSNK1A1-206ENST00000515748 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
CSNK1A1-206ENST00000515748 PHF23Q9BUL5 403 aaPredicted RBP15.68■□□□□ 0.1
CSNK1A1-206ENST00000515748 SIGLEC1Q9BZZ2 1709 aa15.68■□□□□ 0.1
CSNK1A1-206ENST00000515748 FER1L4A9Z1Z3 1794 aa15.67■□□□□ 0.1
CSNK1A1-206ENST00000515748 SETD1BQ9UPS6 1966 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms