RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
LMNA-224ENST00000515711 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
LMNA-224ENST00000515711 CTTNBP2Q8WZ74 1663 aa18.91■□□□□ 0.62
LMNA-224ENST00000515711 CLIP1P30622 1438 aa18.91■□□□□ 0.62
LMNA-224ENST00000515711 CLASP1Q7Z460 1538 aa18.87■□□□□ 0.61
LMNA-224ENST00000515711 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
LMNA-224ENST00000515711 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.61
LMNA-224ENST00000515711 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
LMNA-224ENST00000515711 VPS8Q8N3P4 1428 aa18.79■□□□□ 0.6
LMNA-224ENST00000515711 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
LMNA-224ENST00000515711 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
LMNA-224ENST00000515711 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
LMNA-224ENST00000515711 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
LMNA-224ENST00000515711 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
LMNA-224ENST00000515711 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
LMNA-224ENST00000515711 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
LMNA-224ENST00000515711 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
LMNA-224ENST00000515711 SAMD9Q5K651 1589 aa18.63■□□□□ 0.57
LMNA-224ENST00000515711 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
LMNA-224ENST00000515711 SYNJ2O15056 1496 aa18.59■□□□□ 0.57
LMNA-224ENST00000515711 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
LMNA-224ENST00000515711 GRIN2AQ12879 1464 aa18.58■□□□□ 0.57
LMNA-224ENST00000515711 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
LMNA-224ENST00000515711 PCGF6Q9BYE7 350 aa18.56■□□□□ 0.56
LMNA-224ENST00000515711 APLP2Q06481 763 aa18.54■□□□□ 0.56
LMNA-224ENST00000515711 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
LMNA-224ENST00000515711 KIF13AQ9H1H9 1805 aa18.53■□□□□ 0.56
LMNA-224ENST00000515711 CFAP43Q8NDM7 1665 aa18.53■□□□□ 0.56
LMNA-224ENST00000515711 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
LMNA-224ENST00000515711 UGGT2Q9NYU1 1516 aa18.51■□□□□ 0.55
LMNA-224ENST00000515711 PCF11O94913 1555 aaKnown RBP18.51■□□□□ 0.55
LMNA-224ENST00000515711 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
LMNA-224ENST00000515711 FYCO1Q9BQS8 1478 aa18.5■□□□□ 0.55
LMNA-224ENST00000515711 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
LMNA-224ENST00000515711 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
LMNA-224ENST00000515711 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
LMNA-224ENST00000515711 NUP160Q12769 1436 aa18.45■□□□□ 0.54
LMNA-224ENST00000515711 CASKIN1Q8WXD9 1431 aa18.44■□□□□ 0.54
LMNA-224ENST00000515711 KIAA0556O60303 1618 aa18.43■□□□□ 0.54
LMNA-224ENST00000515711 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
LMNA-224ENST00000515711 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
LMNA-224ENST00000515711 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
LMNA-224ENST00000515711 KDM6BO15054 1643 aa18.35■□□□□ 0.53
LMNA-224ENST00000515711 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
LMNA-224ENST00000515711 LRRIQ1Q96JM4 1722 aa18.34■□□□□ 0.53
LMNA-224ENST00000515711 DISP1Q96F81 1524 aa18.33■□□□□ 0.53
LMNA-224ENST00000515711 CCDC18Q5T9S5 1454 aa18.33■□□□□ 0.53
LMNA-224ENST00000515711 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
LMNA-224ENST00000515711 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
LMNA-224ENST00000515711 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
LMNA-224ENST00000515711 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
LMNA-224ENST00000515711 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
LMNA-224ENST00000515711 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
LMNA-224ENST00000515711 DIP2BQ9P265 1576 aa18.27■□□□□ 0.52
LMNA-224ENST00000515711 RAPGEF6Q8TEU7 1601 aa18.27■□□□□ 0.51
LMNA-224ENST00000515711 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
LMNA-224ENST00000515711 ADGRL1O94910 1474 aa18.25■□□□□ 0.51
LMNA-224ENST00000515711 RRBP1Q9P2E9 1410 aaKnown RBP18.23■□□□□ 0.51
LMNA-224ENST00000515711 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
LMNA-224ENST00000515711 SUPT6HQ7KZ85 1726 aaKnown RBP18.22■□□□□ 0.51
LMNA-224ENST00000515711 MAPKBP1O60336 1514 aa18.2■□□□□ 0.5
LMNA-224ENST00000515711 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
LMNA-224ENST00000515711 EPRSP07814 1512 aaKnown RBP18.18■□□□□ 0.5
LMNA-224ENST00000515711 NPM1P06748 294 aaKnown RBP eCLIP18.18■□□□□ 0.5
LMNA-224ENST00000515711 FBXO41Q8TF61 875 aa18.18■□□□□ 0.5
LMNA-224ENST00000515711 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
LMNA-224ENST00000515711 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
LMNA-224ENST00000515711 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
LMNA-224ENST00000515711 HRCP23327 699 aa18.16■□□□□ 0.5
LMNA-224ENST00000515711 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
LMNA-224ENST00000515711 ABCA8O94911 1581 aa18.13■□□□□ 0.49
LMNA-224ENST00000515711 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
LMNA-224ENST00000515711 NUP153P49790 1475 aaKnown RBP18.12■□□□□ 0.49
LMNA-224ENST00000515711 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
LMNA-224ENST00000515711 ADCY10Q96PN6 1610 aa18.11■□□□□ 0.49
LMNA-224ENST00000515711 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.49
LMNA-224ENST00000515711 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
LMNA-224ENST00000515711 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
LMNA-224ENST00000515711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.07■□□□□ 0.48
LMNA-224ENST00000515711 PLB1Q6P1J6 1458 aa18.06■□□□□ 0.48
LMNA-224ENST00000515711 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
LMNA-224ENST00000515711 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
LMNA-224ENST00000515711 LMTK3Q96Q04 1460 aa18.02■□□□□ 0.48
LMNA-224ENST00000515711 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.48
LMNA-224ENST00000515711 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.47
LMNA-224ENST00000515711 PTPRGP23470 1445 aa18.01■□□□□ 0.47
LMNA-224ENST00000515711 CDK11AQ9UQ88 783 aaPredicted RBP18.01■□□□□ 0.47
LMNA-224ENST00000515711 PTPN23Q9H3S7 1636 aa17.99■□□□□ 0.47
LMNA-224ENST00000515711 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
LMNA-224ENST00000515711 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
LMNA-224ENST00000515711 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
LMNA-224ENST00000515711 KIF14Q15058 1648 aa17.96■□□□□ 0.47
LMNA-224ENST00000515711 ABCC2Q92887 1545 aa17.96■□□□□ 0.47
LMNA-224ENST00000515711 MIA2Q96PC5 1412 aa17.96■□□□□ 0.47
LMNA-224ENST00000515711 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
LMNA-224ENST00000515711 PPRC1Q5VV67 1664 aaKnown RBP17.96■□□□□ 0.47
LMNA-224ENST00000515711 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
LMNA-224ENST00000515711 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
LMNA-224ENST00000515711 ATP10BO94823 1461 aa17.92■□□□□ 0.46
LMNA-224ENST00000515711 CCER1Q8TC90 406 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms