RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 FAM9BQ8IZU0 186 aa18.78■□□□□ 0.6
SH3TC1-225ENST00000515682 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
SH3TC1-225ENST00000515682 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
SH3TC1-225ENST00000515682 CUX2O14529 1486 aa18.72■□□□□ 0.59
SH3TC1-225ENST00000515682 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
SH3TC1-225ENST00000515682 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
SH3TC1-225ENST00000515682 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
SH3TC1-225ENST00000515682 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
SH3TC1-225ENST00000515682 ANP32AP39687 249 aaKnown RBP18.66■□□□□ 0.58
SH3TC1-225ENST00000515682 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
SH3TC1-225ENST00000515682 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
SH3TC1-225ENST00000515682 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
SH3TC1-225ENST00000515682 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
SH3TC1-225ENST00000515682 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
SH3TC1-225ENST00000515682 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
SH3TC1-225ENST00000515682 NCAPD3P42695 1498 aa18.62■□□□□ 0.57
SH3TC1-225ENST00000515682 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
SH3TC1-225ENST00000515682 B4GALNT3Q6L9W6 998 aa18.61■□□□□ 0.57
SH3TC1-225ENST00000515682 DAXXQ9UER7 740 aaPredicted RBP18.61■□□□□ 0.57
SH3TC1-225ENST00000515682 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
SH3TC1-225ENST00000515682 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
SH3TC1-225ENST00000515682 NPM1P06748 294 aaKnown RBP eCLIP18.56■□□□□ 0.56
SH3TC1-225ENST00000515682 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
SH3TC1-225ENST00000515682 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
SH3TC1-225ENST00000515682 DEKP35659 375 aaKnown RBP18.54■□□□□ 0.56
SH3TC1-225ENST00000515682 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
SH3TC1-225ENST00000515682 PPP4R2Q9NY27 417 aa18.52■□□□□ 0.55
SH3TC1-225ENST00000515682 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
SH3TC1-225ENST00000515682 FANCD2Q9BXW9 1451 aa18.5■□□□□ 0.55
SH3TC1-225ENST00000515682 SETD5Q9C0A6 1442 aa18.5■□□□□ 0.55
SH3TC1-225ENST00000515682 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
SH3TC1-225ENST00000515682 PPP1R15AO75807 674 aaPredicted RBP18.46■□□□□ 0.54
SH3TC1-225ENST00000515682 EIF4G2P78344 907 aaKnown RBP eCLIP18.45■□□□□ 0.54
SH3TC1-225ENST00000515682 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
SH3TC1-225ENST00000515682 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
SH3TC1-225ENST00000515682 RTN4Q9NQC3 1192 aaKnown RBP18.44■□□□□ 0.54
SH3TC1-225ENST00000515682 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
SH3TC1-225ENST00000515682 KIF21BO75037 1637 aa18.42■□□□□ 0.54
SH3TC1-225ENST00000515682 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
SH3TC1-225ENST00000515682 TSPY4P0CV99 314 aa18.37■□□□□ 0.53
SH3TC1-225ENST00000515682 TSPY10P0CW01 314 aa18.37■□□□□ 0.53
SH3TC1-225ENST00000515682 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
SH3TC1-225ENST00000515682 CC2D2AQ9P2K1 1620 aa18.35■□□□□ 0.53
SH3TC1-225ENST00000515682 MSH5O43196 834 aa18.35■□□□□ 0.53
SH3TC1-225ENST00000515682 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
SH3TC1-225ENST00000515682 HSPA5P11021 654 aaKnown RBP18.33■□□□□ 0.53
SH3TC1-225ENST00000515682 TMC1Q8TDI8 760 aa18.32■□□□□ 0.52
SH3TC1-225ENST00000515682 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
SH3TC1-225ENST00000515682 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
SH3TC1-225ENST00000515682 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
SH3TC1-225ENST00000515682 CFTRP13569 1480 aa18.29■□□□□ 0.52
SH3TC1-225ENST00000515682 NESP48681 1621 aa18.29■□□□□ 0.52
SH3TC1-225ENST00000515682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
SH3TC1-225ENST00000515682 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
SH3TC1-225ENST00000515682 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
SH3TC1-225ENST00000515682 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
SH3TC1-225ENST00000515682 SYNJ1O43426 1573 aa18.27■□□□□ 0.51
SH3TC1-225ENST00000515682 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
SH3TC1-225ENST00000515682 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
SH3TC1-225ENST00000515682 ARAP1Q96P48 1450 aa18.24■□□□□ 0.51
SH3TC1-225ENST00000515682 IGF1RP08069 1367 aa18.24■□□□□ 0.51
SH3TC1-225ENST00000515682 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
SH3TC1-225ENST00000515682 FOXD1Q16676 465 aa18.23■□□□□ 0.51
SH3TC1-225ENST00000515682 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-225ENST00000515682 NEFMP07197 916 aa18.22■□□□□ 0.51
SH3TC1-225ENST00000515682 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
SH3TC1-225ENST00000515682 WDR97A6NE52 1622 aa18.19■□□□□ 0.5
SH3TC1-225ENST00000515682 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
SH3TC1-225ENST00000515682 PHLDB1Q86UU1 1377 aa18.16■□□□□ 0.5
SH3TC1-225ENST00000515682 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
SH3TC1-225ENST00000515682 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
SH3TC1-225ENST00000515682 CHGAP10645 457 aaKnown RBP18.15■□□□□ 0.5
SH3TC1-225ENST00000515682 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.49
SH3TC1-225ENST00000515682 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
SH3TC1-225ENST00000515682 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
SH3TC1-225ENST00000515682 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
SH3TC1-225ENST00000515682 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.12■□□□□ 0.49
SH3TC1-225ENST00000515682 IPO9Q96P70 1041 aaKnown RBP18.12■□□□□ 0.49
SH3TC1-225ENST00000515682 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
SH3TC1-225ENST00000515682 FMN1Q68DA7 1419 aa18.11■□□□□ 0.49
SH3TC1-225ENST00000515682 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.499e-7■■■■■ 31
SH3TC1-225ENST00000515682 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
SH3TC1-225ENST00000515682 PRKRIP1Q9H875 184 aaPredicted RBP18.09■□□□□ 0.49
SH3TC1-225ENST00000515682 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
SH3TC1-225ENST00000515682 ARXQ96QS3 562 aa18.08■□□□□ 0.48
SH3TC1-225ENST00000515682 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
SH3TC1-225ENST00000515682 WASHC2AQ641Q2 1341 aa18.05■□□□□ 0.48
SH3TC1-225ENST00000515682 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
SH3TC1-225ENST00000515682 CUX1P39880 1505 aa18.03■□□□□ 0.48
SH3TC1-225ENST00000515682 NUDCQ9Y266 331 aa18.03■□□□□ 0.48
SH3TC1-225ENST00000515682 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.48
SH3TC1-225ENST00000515682 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
SH3TC1-225ENST00000515682 PRXQ9BXM0 1461 aa18.02■□□□□ 0.47
SH3TC1-225ENST00000515682 PPM1GO15355 546 aaPredicted RBP18.02■□□□□ 0.47
SH3TC1-225ENST00000515682 MPHOSPH9Q99550 1183 aa18.01■□□□□ 0.47
SH3TC1-225ENST00000515682 ANO8Q9HCE9 1232 aaPredicted RBP18.01■□□□□ 0.47
SH3TC1-225ENST00000515682 TOPBP1Q92547 1522 aa18■□□□□ 0.47
SH3TC1-225ENST00000515682 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
SH3TC1-225ENST00000515682 LRRC9Q6ZRR7 1453 aa17.99■□□□□ 0.47
SH3TC1-225ENST00000515682 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms