RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.17
CDK18-222ENST00000515494 ARAP1Q96P48 1450 aa16.08■□□□□ 0.16
CDK18-222ENST00000515494 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
CDK18-222ENST00000515494 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
CDK18-222ENST00000515494 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CDK18-222ENST00000515494 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
CDK18-222ENST00000515494 GRIN2BQ13224 1484 aa16■□□□□ 0.15
CDK18-222ENST00000515494 CUL7Q14999 1698 aa16■□□□□ 0.15
CDK18-222ENST00000515494 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
CDK18-222ENST00000515494 CCER1Q8TC90 406 aaPredicted RBP15.99■□□□□ 0.15
CDK18-222ENST00000515494 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
CDK18-222ENST00000515494 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
CDK18-222ENST00000515494 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
CDK18-222ENST00000515494 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
CDK18-222ENST00000515494 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
CDK18-222ENST00000515494 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.14
CDK18-222ENST00000515494 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.14
CDK18-222ENST00000515494 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
CDK18-222ENST00000515494 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
CDK18-222ENST00000515494 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
CDK18-222ENST00000515494 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
CDK18-222ENST00000515494 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
CDK18-222ENST00000515494 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
CDK18-222ENST00000515494 ITGAEP38570 1179 aa15.79■□□□□ 0.12
CDK18-222ENST00000515494 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
CDK18-222ENST00000515494 PCF11O94913 1555 aaKnown RBP15.77■□□□□ 0.12
CDK18-222ENST00000515494 EFCAB5A4FU69 1503 aa15.75■□□□□ 0.11
CDK18-222ENST00000515494 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
CDK18-222ENST00000515494 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
CDK18-222ENST00000515494 CEP170Q5SW79 1584 aa15.74■□□□□ 0.11
CDK18-222ENST00000515494 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
CDK18-222ENST00000515494 FMN1Q68DA7 1419 aa15.72■□□□□ 0.11
CDK18-222ENST00000515494 SAMD9Q5K651 1589 aa15.71■□□□□ 0.1
CDK18-222ENST00000515494 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
CDK18-222ENST00000515494 CCNB3Q8WWL7 1395 aa15.69■□□□□ 0.1
CDK18-222ENST00000515494 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
CDK18-222ENST00000515494 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
CDK18-222ENST00000515494 PHLDB1Q86UU1 1377 aa15.68■□□□□ 0.1
CDK18-222ENST00000515494 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
CDK18-222ENST00000515494 DISP1Q96F81 1524 aa15.66■□□□□ 0.1
CDK18-222ENST00000515494 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 NUP160Q12769 1436 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 MTUS2Q5JR59 1369 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 MAP3K1Q13233 1512 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
CDK18-222ENST00000515494 CHD1O14646 1710 aa15.63■□□□□ 0.09
CDK18-222ENST00000515494 CFAP43Q8NDM7 1665 aa15.61■□□□□ 0.09
CDK18-222ENST00000515494 KIAA0556O60303 1618 aa15.61■□□□□ 0.09
CDK18-222ENST00000515494 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
CDK18-222ENST00000515494 PRG4Q92954 1404 aaPredicted RBP15.59■□□□□ 0.09
CDK18-222ENST00000515494 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.09
CDK18-222ENST00000515494 CARMIL2Q6F5E8 1435 aa15.58■□□□□ 0.08
CDK18-222ENST00000515494 LRRIQ1Q96JM4 1722 aa15.58■□□□□ 0.08
CDK18-222ENST00000515494 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
CDK18-222ENST00000515494 DHX57Q6P158 1386 aaKnown RBP15.54■□□□□ 0.08
CDK18-222ENST00000515494 MAGI3Q5TCQ9 1506 aa15.52■□□□□ 0.08
CDK18-222ENST00000515494 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
CDK18-222ENST00000515494 PTPRGP23470 1445 aa15.5■□□□□ 0.07
CDK18-222ENST00000515494 NUP153P49790 1475 aaKnown RBP15.5■□□□□ 0.07
CDK18-222ENST00000515494 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
CDK18-222ENST00000515494 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
CDK18-222ENST00000515494 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
CDK18-222ENST00000515494 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
CDK18-222ENST00000515494 RAPGEF6Q8TEU7 1601 aa15.47■□□□□ 0.07
CDK18-222ENST00000515494 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
CDK18-222ENST00000515494 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
CDK18-222ENST00000515494 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.07
CDK18-222ENST00000515494 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
CDK18-222ENST00000515494 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
CDK18-222ENST00000515494 ZNF777Q9ULD5 760 aaPredicted RBP15.44■□□□□ 0.06
CDK18-222ENST00000515494 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
CDK18-222ENST00000515494 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
CDK18-222ENST00000515494 EHBP1L1Q8N3D4 1523 aa15.42■□□□□ 0.06
CDK18-222ENST00000515494 ZNF644Q9H582 1327 aaPredicted RBP15.41■□□□□ 0.06
CDK18-222ENST00000515494 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
CDK18-222ENST00000515494 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
CDK18-222ENST00000515494 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
CDK18-222ENST00000515494 KCNH8Q96L42 1107 aa15.4■□□□□ 0.06
CDK18-222ENST00000515494 PTPRKQ15262 1439 aa15.4■□□□□ 0.06
CDK18-222ENST00000515494 SUPT6HQ7KZ85 1726 aaKnown RBP15.4■□□□□ 0.06
CDK18-222ENST00000515494 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
CDK18-222ENST00000515494 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
CDK18-222ENST00000515494 ATP10BO94823 1461 aa15.38■□□□□ 0.05
CDK18-222ENST00000515494 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
CDK18-222ENST00000515494 RRP7BPQ9NSQ0 103 aa15.37■□□□□ 0.05
CDK18-222ENST00000515494 BCL11AQ9H165 835 aa15.36■□□□□ 0.05
CDK18-222ENST00000515494 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
CDK18-222ENST00000515494 ABCA8O94911 1581 aa15.35■□□□□ 0.05
CDK18-222ENST00000515494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDK18-222ENST00000515494 UACAQ9BZF9 1416 aa15.35■□□□□ 0.05
CDK18-222ENST00000515494 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
CDK18-222ENST00000515494 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
CDK18-222ENST00000515494 SHROOM2Q13796 1616 aa15.34■□□□□ 0.05
CDK18-222ENST00000515494 TROQ12816 1431 aaPredicted RBP15.33■□□□□ 0.05
CDK18-222ENST00000515494 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
CDK18-222ENST00000515494 MAPKBP1O60336 1514 aa15.32■□□□□ 0.04
CDK18-222ENST00000515494 PTPN23Q9H3S7 1636 aa15.31■□□□□ 0.04
CDK18-222ENST00000515494 KIF14Q15058 1648 aa15.31■□□□□ 0.04
CDK18-222ENST00000515494 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
CDK18-222ENST00000515494 NAIPQ13075 1403 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms