RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
SDHAP3-202ENST00000515467 EEA1Q15075 1411 aa26.56■■□□□ 1.84
SDHAP3-202ENST00000515467 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
SDHAP3-202ENST00000515467 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
SDHAP3-202ENST00000515467 PRXQ9BXM0 1461 aa26.48■■□□□ 1.83
SDHAP3-202ENST00000515467 PRG4Q92954 1404 aaPredicted RBP26.46■■□□□ 1.83
SDHAP3-202ENST00000515467 SHROOM2Q13796 1616 aa26.46■■□□□ 1.83
SDHAP3-202ENST00000515467 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
SDHAP3-202ENST00000515467 TRHP20396 242 aaPredicted RBP26.37■■□□□ 1.81
SDHAP3-202ENST00000515467 ERCC6L2Q5T890 1561 aa26.36■■□□□ 1.81
SDHAP3-202ENST00000515467 IQGAP2Q13576 1575 aa26.33■■□□□ 1.8
SDHAP3-202ENST00000515467 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
SDHAP3-202ENST00000515467 UGGT2Q9NYU1 1516 aa26.22■■□□□ 1.79
SDHAP3-202ENST00000515467 TNIKQ9UKE5 1360 aa26.2■■□□□ 1.79
SDHAP3-202ENST00000515467 PTPRGP23470 1445 aa26.2■■□□□ 1.78
SDHAP3-202ENST00000515467 DISP1Q96F81 1524 aa26.15■■□□□ 1.78
SDHAP3-202ENST00000515467 KIF21BO75037 1637 aa26.15■■□□□ 1.78
SDHAP3-202ENST00000515467 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
SDHAP3-202ENST00000515467 GOLGA3Q08378 1498 aa26.14■■□□□ 1.78
SDHAP3-202ENST00000515467 TTBK1Q5TCY1 1321 aaPredicted RBP26.11■■□□□ 1.77
SDHAP3-202ENST00000515467 NPM1P06748 294 aaKnown RBP eCLIP26.1■■□□□ 1.77
SDHAP3-202ENST00000515467 UBTFP17480 764 aaKnown RBP26.1■■□□□ 1.77
SDHAP3-202ENST00000515467 KIAA0556O60303 1618 aa26.04■■□□□ 1.76
SDHAP3-202ENST00000515467 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
SDHAP3-202ENST00000515467 UACAQ9BZF9 1416 aa25.99■■□□□ 1.75
SDHAP3-202ENST00000515467 P3H3Q8IVL6 736 aa25.98■■□□□ 1.75
SDHAP3-202ENST00000515467 RANGAP1P46060 587 aaPredicted RBP25.97■■□□□ 1.75
SDHAP3-202ENST00000515467 UHRF1BP1LA0JNW5 1464 aa25.95■■□□□ 1.74
SDHAP3-202ENST00000515467 ADCY10Q96PN6 1610 aa25.94■■□□□ 1.74
SDHAP3-202ENST00000515467 ABCC2Q92887 1545 aa25.89■■□□□ 1.74
SDHAP3-202ENST00000515467 SAMD9Q5K651 1589 aa25.88■■□□□ 1.73
SDHAP3-202ENST00000515467 EFCAB5A4FU69 1503 aa25.84■■□□□ 1.73
SDHAP3-202ENST00000515467 PLB1Q6P1J6 1458 aa25.84■■□□□ 1.73
SDHAP3-202ENST00000515467 MAPKBP1O60336 1514 aa25.83■■□□□ 1.72
SDHAP3-202ENST00000515467 KDM5BQ9UGL1 1544 aa25.8■■□□□ 1.72
SDHAP3-202ENST00000515467 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
SDHAP3-202ENST00000515467 ABCA8O94911 1581 aa25.79■■□□□ 1.72
SDHAP3-202ENST00000515467 AEBP2Q6ZN18 517 aaPredicted RBP25.77■■□□□ 1.72
SDHAP3-202ENST00000515467 FAM69CQ0P6D2 419 aa25.75■■□□□ 1.71
SDHAP3-202ENST00000515467 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
SDHAP3-202ENST00000515467 ASXL2Q76L83 1435 aa25.73■■□□□ 1.71
SDHAP3-202ENST00000515467 ARHGAP35Q9NRY4 1499 aa25.71■■□□□ 1.71
SDHAP3-202ENST00000515467 FMN1Q68DA7 1419 aa25.68■■□□□ 1.7
SDHAP3-202ENST00000515467 ZCCHC11Q5TAX3 1644 aaKnown RBP25.65■■□□□ 1.7
SDHAP3-202ENST00000515467 RAPGEF6Q8TEU7 1601 aa25.64■■□□□ 1.7
SDHAP3-202ENST00000515467 ATP10BO94823 1461 aa25.64■■□□□ 1.69
SDHAP3-202ENST00000515467 ARID3CA6NKF2 412 aa25.63■■□□□ 1.69
SDHAP3-202ENST00000515467 CLIP1P30622 1438 aa25.63■■□□□ 1.69
SDHAP3-202ENST00000515467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.62■■□□□ 1.69
SDHAP3-202ENST00000515467 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
SDHAP3-202ENST00000515467 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
SDHAP3-202ENST00000515467 DIP2BQ9P265 1576 aa25.61■■□□□ 1.69
SDHAP3-202ENST00000515467 WDR7Q9Y4E6 1490 aa25.6■■□□□ 1.69
SDHAP3-202ENST00000515467 NUP153P49790 1475 aaKnown RBP25.59■■□□□ 1.69
SDHAP3-202ENST00000515467 KCNH8Q96L42 1107 aa25.56■■□□□ 1.68
SDHAP3-202ENST00000515467 ATP1B4Q9UN42 357 aaPredicted RBP25.56■■□□□ 1.68
SDHAP3-202ENST00000515467 EPRSP07814 1512 aaKnown RBP25.56■■□□□ 1.68
SDHAP3-202ENST00000515467 KIF13AQ9H1H9 1805 aa25.56■■□□□ 1.68
SDHAP3-202ENST00000515467 GLI2P10070 1586 aa25.54■■□□□ 1.68
SDHAP3-202ENST00000515467 PLEKHD1A6NEE1 506 aa25.54■■□□□ 1.68
SDHAP3-202ENST00000515467 CEP162Q5TB80 1403 aa25.5■■□□□ 1.67
SDHAP3-202ENST00000515467 CDK11AQ9UQ88 783 aaPredicted RBP25.47■■□□□ 1.67
SDHAP3-202ENST00000515467 CASKIN1Q8WXD9 1431 aa25.46■■□□□ 1.67
SDHAP3-202ENST00000515467 HECW1Q76N89 1606 aa25.44■■□□□ 1.66
SDHAP3-202ENST00000515467 CD109Q6YHK3 1445 aa25.41■■□□□ 1.66
SDHAP3-202ENST00000515467 CDK13Q14004 1512 aaKnown RBP25.37■■□□□ 1.65
SDHAP3-202ENST00000515467 TEX14Q8IWB6 1497 aa25.36■■□□□ 1.65
SDHAP3-202ENST00000515467 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
SDHAP3-202ENST00000515467 MAP3K4Q9Y6R4 1608 aa25.35■■□□□ 1.65
SDHAP3-202ENST00000515467 CCDC18Q5T9S5 1454 aa25.34■■□□□ 1.65
SDHAP3-202ENST00000515467 MAGI3Q5TCQ9 1506 aa25.32■■□□□ 1.64
SDHAP3-202ENST00000515467 TSPOAP1O95153 1857 aa25.32■■□□□ 1.64
SDHAP3-202ENST00000515467 PCF11O94913 1555 aaKnown RBP25.31■■□□□ 1.64
SDHAP3-202ENST00000515467 CFAP43Q8NDM7 1665 aa25.3■■□□□ 1.64
SDHAP3-202ENST00000515467 ABCA9Q8IUA7 1624 aa25.27■■□□□ 1.64
SDHAP3-202ENST00000515467 TROQ12816 1431 aaPredicted RBP25.27■■□□□ 1.64
SDHAP3-202ENST00000515467 PPRC1Q5VV67 1664 aaKnown RBP25.25■■□□□ 1.63
SDHAP3-202ENST00000515467 PHLDB1Q86UU1 1377 aa25.24■■□□□ 1.63
SDHAP3-202ENST00000515467 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
SDHAP3-202ENST00000515467 KDM6BO15054 1643 aa25.2■■□□□ 1.62
SDHAP3-202ENST00000515467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.19■■□□□ 1.62
SDHAP3-202ENST00000515467 LRRIQ1Q96JM4 1722 aa25.16■■□□□ 1.62
SDHAP3-202ENST00000515467 NEO1Q92859 1461 aa25.15■■□□□ 1.62
SDHAP3-202ENST00000515467 PLCH2O75038 1416 aa25.13■■□□□ 1.61
SDHAP3-202ENST00000515467 MTUS2Q5JR59 1369 aa25.13■■□□□ 1.61
SDHAP3-202ENST00000515467 COL17A1Q9UMD9 1497 aaPredicted RBP25.13■■□□□ 1.61
SDHAP3-202ENST00000515467 KIF14Q15058 1648 aa25.12■■□□□ 1.61
SDHAP3-202ENST00000515467 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
SDHAP3-202ENST00000515467 ARAP3Q8WWN8 1544 aa25.11■■□□□ 1.61
SDHAP3-202ENST00000515467 TTC37Q6PGP7 1564 aa25.1■■□□□ 1.61
SDHAP3-202ENST00000515467 FANCAO15360 1455 aa25.09■■□□□ 1.61
SDHAP3-202ENST00000515467 AKNAQ7Z591 1439 aa25.07■■□□□ 1.6
SDHAP3-202ENST00000515467 APLP2Q06481 763 aa25.05■■□□□ 1.6
SDHAP3-202ENST00000515467 CFAP74Q9C0B2 1584 aa25.02■■□□□ 1.6
SDHAP3-202ENST00000515467 RAPGEF3O95398 923 aa25.01■■□□□ 1.59
SDHAP3-202ENST00000515467 MAP3K1Q13233 1512 aa25■■□□□ 1.59
SDHAP3-202ENST00000515467 DENND4BO75064 1496 aaPredicted RBP24.99■■□□□ 1.59
SDHAP3-202ENST00000515467 EHBP1L1Q8N3D4 1523 aa24.98■■□□□ 1.59
SDHAP3-202ENST00000515467 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
SDHAP3-202ENST00000515467 MYO5CQ9NQX4 1742 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms