RNA–Protein interactions for RNA: ENST00000515425.5

SH3TC2-215, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3TC2, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-215ENST00000515425 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
SH3TC2-215ENST00000515425 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
SH3TC2-215ENST00000515425 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
SH3TC2-215ENST00000515425 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
SH3TC2-215ENST00000515425 KCNH8Q96L42 1107 aa14.24□□□□□ -0.13
SH3TC2-215ENST00000515425 RAD54L2Q9Y4B4 1467 aa14.22□□□□□ -0.13
SH3TC2-215ENST00000515425 CARMIL1Q5VZK9 1371 aa14.2□□□□□ -0.14
SH3TC2-215ENST00000515425 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
SH3TC2-215ENST00000515425 CHMP7Q8WUX9 453 aaPredicted RBP14.2□□□□□ -0.14
SH3TC2-215ENST00000515425 CFTRP13569 1480 aa14.19□□□□□ -0.14
SH3TC2-215ENST00000515425 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
SH3TC2-215ENST00000515425 SETD5Q9C0A6 1442 aa14.19□□□□□ -0.14
SH3TC2-215ENST00000515425 MTUS2Q5JR59 1369 aa14.17□□□□□ -0.14
SH3TC2-215ENST00000515425 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
SH3TC2-215ENST00000515425 ARAP1Q96P48 1450 aa14.15□□□□□ -0.14
SH3TC2-215ENST00000515425 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
SH3TC2-215ENST00000515425 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
SH3TC2-215ENST00000515425 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
SH3TC2-215ENST00000515425 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
SH3TC2-215ENST00000515425 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
SH3TC2-215ENST00000515425 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
SH3TC2-215ENST00000515425 RRP7BPQ9NSQ0 103 aa14.12□□□□□ -0.15
SH3TC2-215ENST00000515425 CUX1P39880 1505 aa14.11□□□□□ -0.15
SH3TC2-215ENST00000515425 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
SH3TC2-215ENST00000515425 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
SH3TC2-215ENST00000515425 ZNF326Q5BKZ1 582 aaKnown RBP14.1□□□□□ -0.15
SH3TC2-215ENST00000515425 IGF1RP08069 1367 aa14.09□□□□□ -0.15
SH3TC2-215ENST00000515425 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
SH3TC2-215ENST00000515425 ANP32EQ9BTT0 268 aa14.08□□□□□ -0.16
SH3TC2-215ENST00000515425 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
SH3TC2-215ENST00000515425 PPP1R15AO75807 674 aaPredicted RBP14.07□□□□□ -0.16
SH3TC2-215ENST00000515425 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
SH3TC2-215ENST00000515425 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
SH3TC2-215ENST00000515425 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
SH3TC2-215ENST00000515425 ARHGAP35Q9NRY4 1499 aa14.05□□□□□ -0.16
SH3TC2-215ENST00000515425 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.16
SH3TC2-215ENST00000515425 ZNF777Q9ULD5 760 aaPredicted RBP14.05□□□□□ -0.16
SH3TC2-215ENST00000515425 FHOD3Q2V2M9 1422 aa14.03□□□□□ -0.16
SH3TC2-215ENST00000515425 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
SH3TC2-215ENST00000515425 PHLDB1Q86UU1 1377 aa14.02□□□□□ -0.17
SH3TC2-215ENST00000515425 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
SH3TC2-215ENST00000515425 MRS2Q9HD23 443 aa14□□□□□ -0.17
SH3TC2-215ENST00000515425 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
SH3TC2-215ENST00000515425 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
SH3TC2-215ENST00000515425 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
SH3TC2-215ENST00000515425 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
SH3TC2-215ENST00000515425 LRRC9Q6ZRR7 1453 aa13.95□□□□□ -0.18
SH3TC2-215ENST00000515425 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
SH3TC2-215ENST00000515425 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
SH3TC2-215ENST00000515425 FOXD1Q16676 465 aa13.91□□□□□ -0.18
SH3TC2-215ENST00000515425 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
SH3TC2-215ENST00000515425 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
SH3TC2-215ENST00000515425 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
SH3TC2-215ENST00000515425 FMN1Q68DA7 1419 aa13.89□□□□□ -0.19
SH3TC2-215ENST00000515425 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
SH3TC2-215ENST00000515425 TIAM1Q13009 1591 aa13.86□□□□□ -0.19
SH3TC2-215ENST00000515425 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
SH3TC2-215ENST00000515425 CCDC18Q5T9S5 1454 aa13.84□□□□□ -0.19
SH3TC2-215ENST00000515425 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
SH3TC2-215ENST00000515425 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
SH3TC2-215ENST00000515425 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
SH3TC2-215ENST00000515425 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.2
SH3TC2-215ENST00000515425 RTL5Q5HYW3 569 aaPredicted RBP13.82□□□□□ -0.2
SH3TC2-215ENST00000515425 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
SH3TC2-215ENST00000515425 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
SH3TC2-215ENST00000515425 FGD6Q6ZV73 1430 aa13.82□□□□□ -0.2
SH3TC2-215ENST00000515425 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
SH3TC2-215ENST00000515425 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
SH3TC2-215ENST00000515425 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
SH3TC2-215ENST00000515425 KDM2AQ9Y2K7 1162 aa13.81□□□□□ -0.2
SH3TC2-215ENST00000515425 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
SH3TC2-215ENST00000515425 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
SH3TC2-215ENST00000515425 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
SH3TC2-215ENST00000515425 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
SH3TC2-215ENST00000515425 MRC2Q9UBG0 1479 aa13.77□□□□□ -0.2
SH3TC2-215ENST00000515425 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.2
SH3TC2-215ENST00000515425 NBR1Q14596 966 aa13.77□□□□□ -0.21
SH3TC2-215ENST00000515425 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
SH3TC2-215ENST00000515425 UACAQ9BZF9 1416 aa13.76□□□□□ -0.21
SH3TC2-215ENST00000515425 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
SH3TC2-215ENST00000515425 PLEKHD1A6NEE1 506 aa13.74□□□□□ -0.21
SH3TC2-215ENST00000515425 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
SH3TC2-215ENST00000515425 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
SH3TC2-215ENST00000515425 DAXXQ9UER7 740 aaPredicted RBP13.73□□□□□ -0.21
SH3TC2-215ENST00000515425 BCL11AQ9H165 835 aa13.72□□□□□ -0.21
SH3TC2-215ENST00000515425 PCF11O94913 1555 aaKnown RBP13.72□□□□□ -0.21
SH3TC2-215ENST00000515425 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
SH3TC2-215ENST00000515425 MAP3K1Q13233 1512 aa13.72□□□□□ -0.21
SH3TC2-215ENST00000515425 PRKRIP1Q9H875 184 aaPredicted RBP13.71□□□□□ -0.21
SH3TC2-215ENST00000515425 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.21
SH3TC2-215ENST00000515425 NCOA2Q15596 1464 aa13.7□□□□□ -0.22
SH3TC2-215ENST00000515425 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
SH3TC2-215ENST00000515425 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
SH3TC2-215ENST00000515425 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
SH3TC2-215ENST00000515425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
SH3TC2-215ENST00000515425 ERICH6BQ5W0A0 696 aa13.68□□□□□ -0.22
SH3TC2-215ENST00000515425 HFM1A2PYH4 1435 aa13.68□□□□□ -0.22
SH3TC2-215ENST00000515425 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
SH3TC2-215ENST00000515425 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
SH3TC2-215ENST00000515425 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms