RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 CENPBP07199 599 aaPredicted RBP25.72■■□□□ 1.71
PRDM5-212ENST00000515109 CFAP43Q8NDM7 1665 aa25.72■■□□□ 1.71
PRDM5-212ENST00000515109 PCF11O94913 1555 aaKnown RBP25.71■■□□□ 1.71
PRDM5-212ENST00000515109 LRRC9Q6ZRR7 1453 aa25.7■■□□□ 1.71
PRDM5-212ENST00000515109 CTTNBP2Q8WZ74 1663 aa25.69■■□□□ 1.7
PRDM5-212ENST00000515109 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
PRDM5-212ENST00000515109 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
PRDM5-212ENST00000515109 EFCAB5A4FU69 1503 aa25.65■■□□□ 1.7
PRDM5-212ENST00000515109 ITGAEP38570 1179 aa25.65■■□□□ 1.7
PRDM5-212ENST00000515109 P3H3Q8IVL6 736 aa25.65■■□□□ 1.7
PRDM5-212ENST00000515109 FHOD3Q2V2M9 1422 aa25.62■■□□□ 1.69
PRDM5-212ENST00000515109 FYCO1Q9BQS8 1478 aa25.58■■□□□ 1.69
PRDM5-212ENST00000515109 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.69
PRDM5-212ENST00000515109 MIER1Q8N108 512 aa25.57■■□□□ 1.68
PRDM5-212ENST00000515109 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
PRDM5-212ENST00000515109 ATP1B4Q9UN42 357 aaPredicted RBP25.54■■□□□ 1.68
PRDM5-212ENST00000515109 RAB3GAP2Q9H2M9 1393 aa25.54■■□□□ 1.68
PRDM5-212ENST00000515109 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
PRDM5-212ENST00000515109 CASKIN1Q8WXD9 1431 aa25.53■■□□□ 1.68
PRDM5-212ENST00000515109 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
PRDM5-212ENST00000515109 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
PRDM5-212ENST00000515109 TDRD9Q8NDG6 1382 aaKnown RBP25.49■■□□□ 1.67
PRDM5-212ENST00000515109 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
PRDM5-212ENST00000515109 SETD5Q9C0A6 1442 aa25.47■■□□□ 1.67
PRDM5-212ENST00000515109 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
PRDM5-212ENST00000515109 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
PRDM5-212ENST00000515109 FMN1Q68DA7 1419 aa25.45■■□□□ 1.67
PRDM5-212ENST00000515109 YTHDC1Q96MU7 727 aaKnown RBP25.45■■□□□ 1.66
PRDM5-212ENST00000515109 MAPKBP1O60336 1514 aa25.44■■□□□ 1.66
PRDM5-212ENST00000515109 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
PRDM5-212ENST00000515109 SAMD9Q5K651 1589 aa25.42■■□□□ 1.66
PRDM5-212ENST00000515109 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
PRDM5-212ENST00000515109 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
PRDM5-212ENST00000515109 LRRIQ1Q96JM4 1722 aa25.34■■□□□ 1.65
PRDM5-212ENST00000515109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.33■■□□□ 1.65
PRDM5-212ENST00000515109 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
PRDM5-212ENST00000515109 FGD6Q6ZV73 1430 aa25.28■■□□□ 1.64
PRDM5-212ENST00000515109 MTUS2Q5JR59 1369 aa25.28■■□□□ 1.64
PRDM5-212ENST00000515109 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
PRDM5-212ENST00000515109 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
PRDM5-212ENST00000515109 PELP1Q8IZL8 1130 aaKnown RBP25.24■■□□□ 1.63
PRDM5-212ENST00000515109 SUPT6HQ7KZ85 1726 aaKnown RBP25.21■■□□□ 1.63
PRDM5-212ENST00000515109 EHBP1L1Q8N3D4 1523 aa25.19■■□□□ 1.62
PRDM5-212ENST00000515109 NCOA2Q15596 1464 aa25.18■■□□□ 1.62
PRDM5-212ENST00000515109 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
PRDM5-212ENST00000515109 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
PRDM5-212ENST00000515109 SIN3AQ96ST3 1273 aa25.17■■□□□ 1.62
PRDM5-212ENST00000515109 IQGAP2Q13576 1575 aa25.14■■□□□ 1.62
PRDM5-212ENST00000515109 MYOM3Q5VTT5 1437 aa25.14■■□□□ 1.62
PRDM5-212ENST00000515109 CCDC18Q5T9S5 1454 aa25.11■■□□□ 1.61
PRDM5-212ENST00000515109 HECW1Q76N89 1606 aa25.11■■□□□ 1.61
PRDM5-212ENST00000515109 PTPRKQ15262 1439 aa25.1■■□□□ 1.61
PRDM5-212ENST00000515109 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
PRDM5-212ENST00000515109 UGGT2Q9NYU1 1516 aa25.09■■□□□ 1.61
PRDM5-212ENST00000515109 HFM1A2PYH4 1435 aa25.09■■□□□ 1.61
PRDM5-212ENST00000515109 MAGI3Q5TCQ9 1506 aa25.08■■□□□ 1.61
PRDM5-212ENST00000515109 TIMELESSQ9UNS1 1208 aa25.07■■□□□ 1.6
PRDM5-212ENST00000515109 ARHGEF11O15085 1522 aa25.06■■□□□ 1.6
PRDM5-212ENST00000515109 UACAQ9BZF9 1416 aa25.01■■□□□ 1.59
PRDM5-212ENST00000515109 IFT140Q96RY7 1462 aa25■■□□□ 1.59
PRDM5-212ENST00000515109 NAIPQ13075 1403 aa25■■□□□ 1.59
PRDM5-212ENST00000515109 EPRSP07814 1512 aaKnown RBP25■■□□□ 1.59
PRDM5-212ENST00000515109 WDR62O43379 1518 aa24.98■■□□□ 1.59
PRDM5-212ENST00000515109 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
PRDM5-212ENST00000515109 PPP1R15AO75807 674 aaPredicted RBP24.96■■□□□ 1.59
PRDM5-212ENST00000515109 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
PRDM5-212ENST00000515109 TCOF1Q13428 1488 aaKnown RBP24.95■■□□□ 1.59
PRDM5-212ENST00000515109 GCC2Q8IWJ2 1684 aa24.92■■□□□ 1.58
PRDM5-212ENST00000515109 TONSLQ96HA7 1378 aa24.92■■□□□ 1.58
PRDM5-212ENST00000515109 KIAA0556O60303 1618 aa24.88■■□□□ 1.57
PRDM5-212ENST00000515109 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
PRDM5-212ENST00000515109 KIAA0586Q9BVV6 1533 aa24.87■■□□□ 1.57
PRDM5-212ENST00000515109 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
PRDM5-212ENST00000515109 MIA2Q96PC5 1412 aa24.85■■□□□ 1.57
PRDM5-212ENST00000515109 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
PRDM5-212ENST00000515109 RRP7BPQ9NSQ0 103 aa24.84■■□□□ 1.57
PRDM5-212ENST00000515109 DISP1Q96F81 1524 aa24.83■■□□□ 1.57
PRDM5-212ENST00000515109 CHIC2Q9UKJ5 165 aa24.83■■□□□ 1.57
PRDM5-212ENST00000515109 GRIN2AQ12879 1464 aa24.82■■□□□ 1.56
PRDM5-212ENST00000515109 AKNAQ7Z591 1439 aa24.82■■□□□ 1.56
PRDM5-212ENST00000515109 HIRIP3Q9BW71 556 aaPredicted RBP24.8■■□□□ 1.56
PRDM5-212ENST00000515109 RAPGEF6Q8TEU7 1601 aa24.78■■□□□ 1.56
PRDM5-212ENST00000515109 KDM6BO15054 1643 aa24.78■■□□□ 1.56
PRDM5-212ENST00000515109 KCNH8Q96L42 1107 aa24.78■■□□□ 1.56
PRDM5-212ENST00000515109 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
PRDM5-212ENST00000515109 NUP153P49790 1475 aaKnown RBP24.75■■□□□ 1.55
PRDM5-212ENST00000515109 KDM5BQ9UGL1 1544 aa24.74■■□□□ 1.55
PRDM5-212ENST00000515109 TRIM52Q96A61 297 aa24.72■■□□□ 1.55
PRDM5-212ENST00000515109 DENND4BO75064 1496 aaPredicted RBP24.71■■□□□ 1.55
PRDM5-212ENST00000515109 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
PRDM5-212ENST00000515109 DNMT1P26358 1616 aaKnown RBP24.69■■□□□ 1.54
PRDM5-212ENST00000515109 DAPK1P53355 1430 aa24.68■■□□□ 1.54
PRDM5-212ENST00000515109 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
PRDM5-212ENST00000515109 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
PRDM5-212ENST00000515109 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.54
PRDM5-212ENST00000515109 ROCK1Q13464 1354 aa24.63■■□□□ 1.53
PRDM5-212ENST00000515109 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
PRDM5-212ENST00000515109 MPHOSPH9Q99550 1183 aa24.63■■□□□ 1.53
PRDM5-212ENST00000515109 ABCC5O15440 1437 aa24.62■■□□□ 1.53
PRDM5-212ENST00000515109 ANP32CO43423 234 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms