RNA–Protein interactions for RNA: ENST00000515091.1

SPOCK1-210, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-210ENST00000515091 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
SPOCK1-210ENST00000515091 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
SPOCK1-210ENST00000515091 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
SPOCK1-210ENST00000515091 UBTFP17480 764 aaKnown RBP21.35■■□□□ 1.01
SPOCK1-210ENST00000515091 IQGAP2Q13576 1575 aa21.33■■□□□ 1.01
SPOCK1-210ENST00000515091 SHROOM2Q13796 1616 aa21.29■■□□□ 1
SPOCK1-210ENST00000515091 TNIKQ9UKE5 1360 aa21.29■■□□□ 1
SPOCK1-210ENST00000515091 JPH4Q96JJ6 628 aa21.29■■□□□ 1
SPOCK1-210ENST00000515091 UGGT2Q9NYU1 1516 aa21.25■□□□□ 0.99
SPOCK1-210ENST00000515091 PRG4Q92954 1404 aaPredicted RBP21.21■□□□□ 0.99
SPOCK1-210ENST00000515091 DISP1Q96F81 1524 aa21.18■□□□□ 0.98
SPOCK1-210ENST00000515091 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
SPOCK1-210ENST00000515091 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
SPOCK1-210ENST00000515091 SAMD9Q5K651 1589 aa21.14■□□□□ 0.98
SPOCK1-210ENST00000515091 ARHGEF11O15085 1522 aa21.14■□□□□ 0.98
SPOCK1-210ENST00000515091 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
SPOCK1-210ENST00000515091 KIAA0556O60303 1618 aa21.13■□□□□ 0.97
SPOCK1-210ENST00000515091 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
SPOCK1-210ENST00000515091 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
SPOCK1-210ENST00000515091 ARHGAP35Q9NRY4 1499 aa21.1■□□□□ 0.97
SPOCK1-210ENST00000515091 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
SPOCK1-210ENST00000515091 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
SPOCK1-210ENST00000515091 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
SPOCK1-210ENST00000515091 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
SPOCK1-210ENST00000515091 CLIP1P30622 1438 aa21.09■□□□□ 0.97
SPOCK1-210ENST00000515091 P3H3Q8IVL6 736 aa21.06■□□□□ 0.96
SPOCK1-210ENST00000515091 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
SPOCK1-210ENST00000515091 ARAP1Q96P48 1450 aa21.02■□□□□ 0.96
SPOCK1-210ENST00000515091 PTPRGP23470 1445 aa21■□□□□ 0.95
SPOCK1-210ENST00000515091 TTBK1Q5TCY1 1321 aaPredicted RBP20.93■□□□□ 0.94
SPOCK1-210ENST00000515091 CYB5RLQ6IPT4 315 aa20.91■□□□□ 0.94
SPOCK1-210ENST00000515091 FMN1Q68DA7 1419 aa20.9■□□□□ 0.94
SPOCK1-210ENST00000515091 ABCA8O94911 1581 aa20.89■□□□□ 0.93
SPOCK1-210ENST00000515091 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
SPOCK1-210ENST00000515091 UACAQ9BZF9 1416 aa20.87■□□□□ 0.93
SPOCK1-210ENST00000515091 UHRF1BP1LA0JNW5 1464 aa20.85■□□□□ 0.93
SPOCK1-210ENST00000515091 RAPGEF6Q8TEU7 1601 aa20.84■□□□□ 0.93
SPOCK1-210ENST00000515091 ABCC2Q92887 1545 aa20.83■□□□□ 0.93
SPOCK1-210ENST00000515091 ADCY10Q96PN6 1610 aa20.83■□□□□ 0.93
SPOCK1-210ENST00000515091 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
SPOCK1-210ENST00000515091 CASKIN1Q8WXD9 1431 aa20.8■□□□□ 0.92
SPOCK1-210ENST00000515091 PCF11O94913 1555 aaKnown RBP20.8■□□□□ 0.92
SPOCK1-210ENST00000515091 NUP153P49790 1475 aaKnown RBP20.78■□□□□ 0.92
SPOCK1-210ENST00000515091 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
SPOCK1-210ENST00000515091 HECW1Q76N89 1606 aa20.75■□□□□ 0.91
SPOCK1-210ENST00000515091 KDM5BQ9UGL1 1544 aa20.75■□□□□ 0.91
SPOCK1-210ENST00000515091 ATP10BO94823 1461 aa20.73■□□□□ 0.91
SPOCK1-210ENST00000515091 LRRIQ1Q96JM4 1722 aa20.71■□□□□ 0.91
SPOCK1-210ENST00000515091 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
SPOCK1-210ENST00000515091 EPRSP07814 1512 aaKnown RBP20.7■□□□□ 0.9
SPOCK1-210ENST00000515091 ZCCHC11Q5TAX3 1644 aaKnown RBP20.69■□□□□ 0.9
SPOCK1-210ENST00000515091 ARID3CA6NKF2 412 aa20.68■□□□□ 0.9
SPOCK1-210ENST00000515091 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
SPOCK1-210ENST00000515091 NPM1P06748 294 aaKnown RBP eCLIP20.67■□□□□ 0.9
SPOCK1-210ENST00000515091 CCDC18Q5T9S5 1454 aa20.65■□□□□ 0.9
SPOCK1-210ENST00000515091 MAPKBP1O60336 1514 aa20.61■□□□□ 0.89
SPOCK1-210ENST00000515091 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
SPOCK1-210ENST00000515091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
SPOCK1-210ENST00000515091 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
SPOCK1-210ENST00000515091 ASXL2Q76L83 1435 aa20.59■□□□□ 0.89
SPOCK1-210ENST00000515091 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
SPOCK1-210ENST00000515091 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.89
SPOCK1-210ENST00000515091 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
SPOCK1-210ENST00000515091 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
SPOCK1-210ENST00000515091 CDK11AQ9UQ88 783 aaPredicted RBP20.55■□□□□ 0.88
SPOCK1-210ENST00000515091 WDR7Q9Y4E6 1490 aa20.55■□□□□ 0.88
SPOCK1-210ENST00000515091 APLP2Q06481 763 aa20.52■□□□□ 0.88
SPOCK1-210ENST00000515091 TROQ12816 1431 aaPredicted RBP20.52■□□□□ 0.87
SPOCK1-210ENST00000515091 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
SPOCK1-210ENST00000515091 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
SPOCK1-210ENST00000515091 MTUS2Q5JR59 1369 aa20.47■□□□□ 0.87
SPOCK1-210ENST00000515091 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
SPOCK1-210ENST00000515091 ABCC10Q5T3U5 1492 aa20.46■□□□□ 0.87
SPOCK1-210ENST00000515091 KCNH8Q96L42 1107 aa20.46■□□□□ 0.87
SPOCK1-210ENST00000515091 DIP2BQ9P265 1576 aa20.44■□□□□ 0.86
SPOCK1-210ENST00000515091 KIF14Q15058 1648 aa20.43■□□□□ 0.86
SPOCK1-210ENST00000515091 GLI2P10070 1586 aa20.42■□□□□ 0.86
SPOCK1-210ENST00000515091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.4■□□□□ 0.86
SPOCK1-210ENST00000515091 KIF13AQ9H1H9 1805 aa20.39■□□□□ 0.86
SPOCK1-210ENST00000515091 FAM69CQ0P6D2 419 aa20.39■□□□□ 0.85
SPOCK1-210ENST00000515091 ABCA9Q8IUA7 1624 aa20.38■□□□□ 0.85
SPOCK1-210ENST00000515091 SUPT6HQ7KZ85 1726 aaKnown RBP20.37■□□□□ 0.85
SPOCK1-210ENST00000515091 TTC37Q6PGP7 1564 aa20.37■□□□□ 0.85
SPOCK1-210ENST00000515091 NCOA2Q15596 1464 aa20.36■□□□□ 0.85
SPOCK1-210ENST00000515091 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
SPOCK1-210ENST00000515091 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
SPOCK1-210ENST00000515091 CD109Q6YHK3 1445 aa20.31■□□□□ 0.84
SPOCK1-210ENST00000515091 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
SPOCK1-210ENST00000515091 GPATCH8Q9UKJ3 1502 aaKnown RBP20.3■□□□□ 0.84
SPOCK1-210ENST00000515091 PLCH2O75038 1416 aa20.28■□□□□ 0.84
SPOCK1-210ENST00000515091 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
SPOCK1-210ENST00000515091 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
SPOCK1-210ENST00000515091 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
SPOCK1-210ENST00000515091 MYO5CQ9NQX4 1742 aa20.27■□□□□ 0.83
SPOCK1-210ENST00000515091 PREX2Q70Z35 1606 aa20.26■□□□□ 0.83
SPOCK1-210ENST00000515091 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
SPOCK1-210ENST00000515091 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
SPOCK1-210ENST00000515091 CDC42BPBQ9Y5S2 1711 aa20.25■□□□□ 0.83
SPOCK1-210ENST00000515091 MYOM3Q5VTT5 1437 aa20.24■□□□□ 0.83
SPOCK1-210ENST00000515091 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms