RNA–Protein interactions for RNA: ENST00000515070.1

ABCC3-215, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-215ENST00000515070 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.08
ABCC3-215ENST00000515070 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.08
ABCC3-215ENST00000515070 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.08
ABCC3-215ENST00000515070 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
ABCC3-215ENST00000515070 SHROOM2Q13796 1616 aa14.53□□□□□ -0.08
ABCC3-215ENST00000515070 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.08
ABCC3-215ENST00000515070 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
ABCC3-215ENST00000515070 CARMIL2Q6F5E8 1435 aa14.49□□□□□ -0.09
ABCC3-215ENST00000515070 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
ABCC3-215ENST00000515070 IQGAP2Q13576 1575 aa14.47□□□□□ -0.09
ABCC3-215ENST00000515070 UGGT2Q9NYU1 1516 aa14.43□□□□□ -0.1
ABCC3-215ENST00000515070 KIF21BO75037 1637 aa14.41□□□□□ -0.1
ABCC3-215ENST00000515070 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
ABCC3-215ENST00000515070 GOLGA3Q08378 1498 aa14.41□□□□□ -0.1
ABCC3-215ENST00000515070 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
ABCC3-215ENST00000515070 PTPRGP23470 1445 aa14.4□□□□□ -0.1
ABCC3-215ENST00000515070 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
ABCC3-215ENST00000515070 DISP1Q96F81 1524 aa14.36□□□□□ -0.11
ABCC3-215ENST00000515070 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
ABCC3-215ENST00000515070 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
ABCC3-215ENST00000515070 KIAA0556O60303 1618 aa14.31□□□□□ -0.12
ABCC3-215ENST00000515070 UACAQ9BZF9 1416 aa14.29□□□□□ -0.12
ABCC3-215ENST00000515070 UHRF1BP1LA0JNW5 1464 aa14.29□□□□□ -0.12
ABCC3-215ENST00000515070 TTBK1Q5TCY1 1321 aaPredicted RBP14.26□□□□□ -0.13
ABCC3-215ENST00000515070 EFCAB5A4FU69 1503 aa14.25□□□□□ -0.13
ABCC3-215ENST00000515070 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
ABCC3-215ENST00000515070 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
ABCC3-215ENST00000515070 ABCC2Q92887 1545 aa14.24□□□□□ -0.13
ABCC3-215ENST00000515070 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
ABCC3-215ENST00000515070 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
ABCC3-215ENST00000515070 RANGAP1P46060 587 aaPredicted RBP14.21□□□□□ -0.13
ABCC3-215ENST00000515070 ADCY10Q96PN6 1610 aa14.21□□□□□ -0.13
ABCC3-215ENST00000515070 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
ABCC3-215ENST00000515070 KDM5BQ9UGL1 1544 aa14.19□□□□□ -0.14
ABCC3-215ENST00000515070 PLB1Q6P1J6 1458 aa14.18□□□□□ -0.14
ABCC3-215ENST00000515070 FMN1Q68DA7 1419 aa14.17□□□□□ -0.14
ABCC3-215ENST00000515070 ABCA8O94911 1581 aa14.17□□□□□ -0.14
ABCC3-215ENST00000515070 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
ABCC3-215ENST00000515070 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
ABCC3-215ENST00000515070 ABCC10Q5T3U5 1492 aa14.13□□□□□ -0.15
ABCC3-215ENST00000515070 ASXL2Q76L83 1435 aa14.13□□□□□ -0.15
ABCC3-215ENST00000515070 FAM69CQ0P6D2 419 aa14.12□□□□□ -0.15
ABCC3-215ENST00000515070 CLIP1P30622 1438 aa14.11□□□□□ -0.15
ABCC3-215ENST00000515070 RAPGEF6Q8TEU7 1601 aa14.08□□□□□ -0.15
ABCC3-215ENST00000515070 ATP10BO94823 1461 aa14.08□□□□□ -0.16
ABCC3-215ENST00000515070 WDR7Q9Y4E6 1490 aa14.07□□□□□ -0.16
ABCC3-215ENST00000515070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
ABCC3-215ENST00000515070 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
ABCC3-215ENST00000515070 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
ABCC3-215ENST00000515070 NUP153P49790 1475 aaKnown RBP14.06□□□□□ -0.16
ABCC3-215ENST00000515070 ZCCHC11Q5TAX3 1644 aaKnown RBP14.06□□□□□ -0.16
ABCC3-215ENST00000515070 LOC105371045A0A1W2PR82 267 aa14.06□□□□□ -0.16
ABCC3-215ENST00000515070 PLEKHD1A6NEE1 506 aa14.06□□□□□ -0.16
ABCC3-215ENST00000515070 GLI2P10070 1586 aa14.05□□□□□ -0.16
ABCC3-215ENST00000515070 CEP162Q5TB80 1403 aa14.04□□□□□ -0.16
ABCC3-215ENST00000515070 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
ABCC3-215ENST00000515070 EPRSP07814 1512 aaKnown RBP14.03□□□□□ -0.16
ABCC3-215ENST00000515070 CASKIN1Q8WXD9 1431 aa14.02□□□□□ -0.16
ABCC3-215ENST00000515070 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
ABCC3-215ENST00000515070 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
ABCC3-215ENST00000515070 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
ABCC3-215ENST00000515070 ARID3CA6NKF2 412 aa14□□□□□ -0.17
ABCC3-215ENST00000515070 KIF13AQ9H1H9 1805 aa13.98□□□□□ -0.17
ABCC3-215ENST00000515070 CCDC18Q5T9S5 1454 aa13.98□□□□□ -0.17
ABCC3-215ENST00000515070 FYCO1Q9BQS8 1478 aa13.98□□□□□ -0.17
ABCC3-215ENST00000515070 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.17
ABCC3-215ENST00000515070 CD109Q6YHK3 1445 aa13.96□□□□□ -0.18
ABCC3-215ENST00000515070 PHLDB1Q86UU1 1377 aa13.94□□□□□ -0.18
ABCC3-215ENST00000515070 MAGI3Q5TCQ9 1506 aa13.93□□□□□ -0.18
ABCC3-215ENST00000515070 CDK13Q14004 1512 aaKnown RBP13.91□□□□□ -0.18
ABCC3-215ENST00000515070 MAP3K4Q9Y6R4 1608 aa13.91□□□□□ -0.18
ABCC3-215ENST00000515070 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
ABCC3-215ENST00000515070 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
ABCC3-215ENST00000515070 CFAP43Q8NDM7 1665 aa13.9□□□□□ -0.18
ABCC3-215ENST00000515070 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.19
ABCC3-215ENST00000515070 ABCA9Q8IUA7 1624 aa13.89□□□□□ -0.19
ABCC3-215ENST00000515070 NEO1Q92859 1461 aa13.85□□□□□ -0.19
ABCC3-215ENST00000515070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.84□□□□□ -0.19
ABCC3-215ENST00000515070 MTUS2Q5JR59 1369 aa13.83□□□□□ -0.19
ABCC3-215ENST00000515070 PLCH2O75038 1416 aa13.83□□□□□ -0.2
ABCC3-215ENST00000515070 APLP2Q06481 763 aa13.83□□□□□ -0.2
ABCC3-215ENST00000515070 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
ABCC3-215ENST00000515070 KIF14Q15058 1648 aa13.82□□□□□ -0.2
ABCC3-215ENST00000515070 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
ABCC3-215ENST00000515070 MAP3K1Q13233 1512 aa13.82□□□□□ -0.2
ABCC3-215ENST00000515070 ARAP3Q8WWN8 1544 aa13.82□□□□□ -0.2
ABCC3-215ENST00000515070 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
ABCC3-215ENST00000515070 KDM6BO15054 1643 aa13.81□□□□□ -0.2
ABCC3-215ENST00000515070 FANCAO15360 1455 aa13.8□□□□□ -0.2
ABCC3-215ENST00000515070 AKNAQ7Z591 1439 aa13.78□□□□□ -0.2
ABCC3-215ENST00000515070 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
ABCC3-215ENST00000515070 CFAP74Q9C0B2 1584 aa13.77□□□□□ -0.21
ABCC3-215ENST00000515070 TTC37Q6PGP7 1564 aa13.76□□□□□ -0.21
ABCC3-215ENST00000515070 EHBP1L1Q8N3D4 1523 aa13.76□□□□□ -0.21
ABCC3-215ENST00000515070 COL17A1Q9UMD9 1497 aaPredicted RBP13.76□□□□□ -0.21
ABCC3-215ENST00000515070 CCNB3Q8WWL7 1395 aa13.75□□□□□ -0.21
ABCC3-215ENST00000515070 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
ABCC3-215ENST00000515070 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
ABCC3-215ENST00000515070 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
ABCC3-215ENST00000515070 LRRC9Q6ZRR7 1453 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms