RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
PROM1-218ENST00000514967 SHROOM2Q13796 1616 aa26.57■■□□□ 1.84
PROM1-218ENST00000514967 IQGAP2Q13576 1575 aa26.54■■□□□ 1.84
PROM1-218ENST00000514967 CTTNBP2Q8WZ74 1663 aa26.54■■□□□ 1.84
PROM1-218ENST00000514967 JPH4Q96JJ6 628 aa26.53■■□□□ 1.84
PROM1-218ENST00000514967 UGGT2Q9NYU1 1516 aa26.48■■□□□ 1.83
PROM1-218ENST00000514967 TNIKQ9UKE5 1360 aa26.42■■□□□ 1.82
PROM1-218ENST00000514967 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
PROM1-218ENST00000514967 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
PROM1-218ENST00000514967 PRG4Q92954 1404 aaPredicted RBP26.39■■□□□ 1.82
PROM1-218ENST00000514967 CARMIL2Q6F5E8 1435 aa26.38■■□□□ 1.81
PROM1-218ENST00000514967 DISP1Q96F81 1524 aa26.34■■□□□ 1.81
PROM1-218ENST00000514967 RIMBP3CA6NJZ7 1639 aa26.32■■□□□ 1.8
PROM1-218ENST00000514967 RIMBP3BA6NNM3 1639 aa26.32■■□□□ 1.8
PROM1-218ENST00000514967 RIMBP3Q9UFD9 1639 aa26.32■■□□□ 1.8
PROM1-218ENST00000514967 EFCAB5A4FU69 1503 aa26.29■■□□□ 1.8
PROM1-218ENST00000514967 SAMD9Q5K651 1589 aa26.29■■□□□ 1.8
PROM1-218ENST00000514967 ERCC6L2Q5T890 1561 aa26.27■■□□□ 1.8
PROM1-218ENST00000514967 KIAA0556O60303 1618 aa26.27■■□□□ 1.8
PROM1-218ENST00000514967 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
PROM1-218ENST00000514967 ARAP1Q96P48 1450 aa26.21■■□□□ 1.79
PROM1-218ENST00000514967 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.78
PROM1-218ENST00000514967 PTPRGP23470 1445 aa26.17■■□□□ 1.78
PROM1-218ENST00000514967 ARHGAP35Q9NRY4 1499 aa26.15■■□□□ 1.78
PROM1-218ENST00000514967 CLIP1P30622 1438 aa26.13■■□□□ 1.77
PROM1-218ENST00000514967 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
PROM1-218ENST00000514967 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
PROM1-218ENST00000514967 UHRF1BP1LA0JNW5 1464 aa26.05■■□□□ 1.76
PROM1-218ENST00000514967 FHOD3Q2V2M9 1422 aa26.04■■□□□ 1.76
PROM1-218ENST00000514967 FMN1Q68DA7 1419 aa26.04■■□□□ 1.76
PROM1-218ENST00000514967 UACAQ9BZF9 1416 aa26.03■■□□□ 1.76
PROM1-218ENST00000514967 P3H3Q8IVL6 736 aa26.01■■□□□ 1.75
PROM1-218ENST00000514967 RANGAP1P46060 587 aaPredicted RBP26■■□□□ 1.75
PROM1-218ENST00000514967 ABCA8O94911 1581 aa25.99■■□□□ 1.75
PROM1-218ENST00000514967 ABCC2Q92887 1545 aa25.97■■□□□ 1.75
PROM1-218ENST00000514967 PLB1Q6P1J6 1458 aa25.93■■□□□ 1.74
PROM1-218ENST00000514967 ADCY10Q96PN6 1610 aa25.92■■□□□ 1.74
PROM1-218ENST00000514967 KDM5BQ9UGL1 1544 aa25.89■■□□□ 1.74
PROM1-218ENST00000514967 RAPGEF6Q8TEU7 1601 aa25.89■■□□□ 1.74
PROM1-218ENST00000514967 CASKIN1Q8WXD9 1431 aa25.87■■□□□ 1.73
PROM1-218ENST00000514967 TTBK1Q5TCY1 1321 aaPredicted RBP25.84■■□□□ 1.73
PROM1-218ENST00000514967 NUP153P49790 1475 aaKnown RBP25.83■■□□□ 1.73
PROM1-218ENST00000514967 NPM1P06748 294 aaKnown RBP eCLIP25.82■■□□□ 1.72
PROM1-218ENST00000514967 FYCO1Q9BQS8 1478 aa25.82■■□□□ 1.72
PROM1-218ENST00000514967 VPS8Q8N3P4 1428 aa25.81■■□□□ 1.72
PROM1-218ENST00000514967 HECW1Q76N89 1606 aa25.8■■□□□ 1.72
PROM1-218ENST00000514967 MAPKBP1O60336 1514 aa25.78■■□□□ 1.72
PROM1-218ENST00000514967 ATP10BO94823 1461 aa25.77■■□□□ 1.72
PROM1-218ENST00000514967 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
PROM1-218ENST00000514967 ZCCHC11Q5TAX3 1644 aaKnown RBP25.73■■□□□ 1.71
PROM1-218ENST00000514967 EPRSP07814 1512 aaKnown RBP25.73■■□□□ 1.71
PROM1-218ENST00000514967 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
PROM1-218ENST00000514967 ASXL2Q76L83 1435 aa25.65■■□□□ 1.7
PROM1-218ENST00000514967 MAP3K1Q13233 1512 aa25.65■■□□□ 1.7
PROM1-218ENST00000514967 CDK11AQ9UQ88 783 aaPredicted RBP25.64■■□□□ 1.7
PROM1-218ENST00000514967 WDR7Q9Y4E6 1490 aa25.62■■□□□ 1.69
PROM1-218ENST00000514967 PLEKHD1A6NEE1 506 aa25.6■■□□□ 1.69
PROM1-218ENST00000514967 LRRIQ1Q96JM4 1722 aa25.6■■□□□ 1.69
PROM1-218ENST00000514967 CDK13Q14004 1512 aaKnown RBP25.59■■□□□ 1.69
PROM1-218ENST00000514967 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
PROM1-218ENST00000514967 ABCC10Q5T3U5 1492 aa25.58■■□□□ 1.69
PROM1-218ENST00000514967 GLI2P10070 1586 aa25.54■■□□□ 1.68
PROM1-218ENST00000514967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.54■■□□□ 1.68
PROM1-218ENST00000514967 HNRNPUL2Q1KMD3 747 aaKnown RBP25.54■■□□□ 1.68
PROM1-218ENST00000514967 TROQ12816 1431 aaPredicted RBP25.53■■□□□ 1.68
PROM1-218ENST00000514967 TIAM1Q13009 1591 aa25.52■■□□□ 1.68
PROM1-218ENST00000514967 ARID3CA6NKF2 412 aa25.51■■□□□ 1.67
PROM1-218ENST00000514967 CFAP43Q8NDM7 1665 aa25.51■■□□□ 1.67
PROM1-218ENST00000514967 DIP2BQ9P265 1576 aa25.5■■□□□ 1.67
PROM1-218ENST00000514967 APLP2Q06481 763 aa25.46■■□□□ 1.67
PROM1-218ENST00000514967 MAGI3Q5TCQ9 1506 aa25.43■■□□□ 1.66
PROM1-218ENST00000514967 EHBP1L1Q8N3D4 1523 aa25.42■■□□□ 1.66
PROM1-218ENST00000514967 LRRC9Q6ZRR7 1453 aa25.42■■□□□ 1.66
PROM1-218ENST00000514967 MTUS2Q5JR59 1369 aa25.42■■□□□ 1.66
PROM1-218ENST00000514967 KIF13AQ9H1H9 1805 aa25.42■■□□□ 1.66
PROM1-218ENST00000514967 ABCA9Q8IUA7 1624 aa25.41■■□□□ 1.66
PROM1-218ENST00000514967 FAM69CQ0P6D2 419 aa25.41■■□□□ 1.66
PROM1-218ENST00000514967 KIF14Q15058 1648 aa25.38■■□□□ 1.65
PROM1-218ENST00000514967 KCNH8Q96L42 1107 aa25.38■■□□□ 1.65
PROM1-218ENST00000514967 MAP3K4Q9Y6R4 1608 aa25.37■■□□□ 1.65
PROM1-218ENST00000514967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.36■■□□□ 1.65
PROM1-218ENST00000514967 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
PROM1-218ENST00000514967 TRHP20396 242 aaPredicted RBP25.33■■□□□ 1.65
PROM1-218ENST00000514967 CD109Q6YHK3 1445 aa25.32■■□□□ 1.64
PROM1-218ENST00000514967 KANK4Q5T7N3 995 aaPredicted RBP25.31■■□□□ 1.64
PROM1-218ENST00000514967 SUPT6HQ7KZ85 1726 aaKnown RBP25.29■■□□□ 1.64
PROM1-218ENST00000514967 PLCH2O75038 1416 aa25.29■■□□□ 1.64
PROM1-218ENST00000514967 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
PROM1-218ENST00000514967 PHLDB1Q86UU1 1377 aa25.27■■□□□ 1.64
PROM1-218ENST00000514967 TEX14Q8IWB6 1497 aa25.26■■□□□ 1.63
PROM1-218ENST00000514967 NCOA2Q15596 1464 aa25.25■■□□□ 1.63
PROM1-218ENST00000514967 GPATCH8Q9UKJ3 1502 aaKnown RBP25.22■■□□□ 1.63
PROM1-218ENST00000514967 PPRC1Q5VV67 1664 aaKnown RBP25.21■■□□□ 1.63
PROM1-218ENST00000514967 NEO1Q92859 1461 aa25.21■■□□□ 1.63
PROM1-218ENST00000514967 MYO5CQ9NQX4 1742 aa25.2■■□□□ 1.63
PROM1-218ENST00000514967 CCNB3Q8WWL7 1395 aa25.2■■□□□ 1.63
PROM1-218ENST00000514967 PREX2Q70Z35 1606 aa25.18■■□□□ 1.62
PROM1-218ENST00000514967 CDC42BPAQ5VT25 1732 aa25.16■■□□□ 1.62
PROM1-218ENST00000514967 EFCAB2Q5VUJ9 269 aa25.16■■□□□ 1.62
PROM1-218ENST00000514967 CFAP74Q9C0B2 1584 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms