RNA–Protein interactions for RNA: ENST00000514435.1

LRBA-212, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 2

Gene LRBA, Length 2,140 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-212ENST00000514435 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
LRBA-212ENST00000514435 EEA1Q15075 1411 aa24.11■■□□□ 1.45
LRBA-212ENST00000514435 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
LRBA-212ENST00000514435 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
LRBA-212ENST00000514435 KIAA0586Q9BVV6 1533 aa24.04■■□□□ 1.44
LRBA-212ENST00000514435 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
LRBA-212ENST00000514435 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
LRBA-212ENST00000514435 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.43
LRBA-212ENST00000514435 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
LRBA-212ENST00000514435 KIF21BO75037 1637 aa23.93■■□□□ 1.42
LRBA-212ENST00000514435 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
LRBA-212ENST00000514435 CTTNBP2Q8WZ74 1663 aa23.92■■□□□ 1.42
LRBA-212ENST00000514435 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
LRBA-212ENST00000514435 UGGT2Q9NYU1 1516 aa23.82■■□□□ 1.4
LRBA-212ENST00000514435 DISP1Q96F81 1524 aa23.81■■□□□ 1.4
LRBA-212ENST00000514435 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
LRBA-212ENST00000514435 KIAA0556O60303 1618 aa23.74■■□□□ 1.39
LRBA-212ENST00000514435 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
LRBA-212ENST00000514435 UBTFP17480 764 aaKnown RBP23.72■■□□□ 1.39
LRBA-212ENST00000514435 TTBK1Q5TCY1 1321 aaPredicted RBP23.71■■□□□ 1.39
LRBA-212ENST00000514435 RANGAP1P46060 587 aaPredicted RBP23.71■■□□□ 1.39
LRBA-212ENST00000514435 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
LRBA-212ENST00000514435 PTPRGP23470 1445 aa23.66■■□□□ 1.38
LRBA-212ENST00000514435 P3H3Q8IVL6 736 aa23.65■■□□□ 1.38
LRBA-212ENST00000514435 SAMD9Q5K651 1589 aa23.64■■□□□ 1.38
LRBA-212ENST00000514435 ADCY10Q96PN6 1610 aa23.6■■□□□ 1.37
LRBA-212ENST00000514435 LOC105371045A0A1W2PR82 267 aa23.56■■□□□ 1.36
LRBA-212ENST00000514435 FHOD3Q2V2M9 1422 aa23.55■■□□□ 1.36
LRBA-212ENST00000514435 PLB1Q6P1J6 1458 aa23.53■■□□□ 1.36
LRBA-212ENST00000514435 EFCAB5A4FU69 1503 aa23.51■■□□□ 1.35
LRBA-212ENST00000514435 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
LRBA-212ENST00000514435 UACAQ9BZF9 1416 aa23.51■■□□□ 1.35
LRBA-212ENST00000514435 ABCC2Q92887 1545 aa23.48■■□□□ 1.35
LRBA-212ENST00000514435 ABCA8O94911 1581 aa23.47■■□□□ 1.35
LRBA-212ENST00000514435 UHRF1BP1LA0JNW5 1464 aa23.46■■□□□ 1.35
LRBA-212ENST00000514435 CLIP1P30622 1438 aa23.39■■□□□ 1.33
LRBA-212ENST00000514435 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
LRBA-212ENST00000514435 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
LRBA-212ENST00000514435 ARID3CA6NKF2 412 aa23.36■■□□□ 1.33
LRBA-212ENST00000514435 ZCCHC11Q5TAX3 1644 aaKnown RBP23.36■■□□□ 1.33
LRBA-212ENST00000514435 NPM1P06748 294 aaKnown RBP eCLIP23.36■■□□□ 1.33
LRBA-212ENST00000514435 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
LRBA-212ENST00000514435 MAPKBP1O60336 1514 aa23.35■■□□□ 1.33
LRBA-212ENST00000514435 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
LRBA-212ENST00000514435 NUP153P49790 1475 aaKnown RBP23.32■■□□□ 1.32
LRBA-212ENST00000514435 ASXL2Q76L83 1435 aa23.29■■□□□ 1.32
LRBA-212ENST00000514435 ATP10BO94823 1461 aa23.29■■□□□ 1.32
LRBA-212ENST00000514435 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
LRBA-212ENST00000514435 KIF13AQ9H1H9 1805 aa23.25■■□□□ 1.31
LRBA-212ENST00000514435 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
LRBA-212ENST00000514435 ABCC10Q5T3U5 1492 aa23.23■■□□□ 1.31
LRBA-212ENST00000514435 PCF11O94913 1555 aaKnown RBP23.23■■□□□ 1.31
LRBA-212ENST00000514435 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
LRBA-212ENST00000514435 LRRIQ1Q96JM4 1722 aa23.19■■□□□ 1.3
LRBA-212ENST00000514435 ATP1B4Q9UN42 357 aaPredicted RBP23.19■■□□□ 1.3
LRBA-212ENST00000514435 HECW1Q76N89 1606 aa23.18■■□□□ 1.3
LRBA-212ENST00000514435 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
LRBA-212ENST00000514435 FAM69CQ0P6D2 419 aa23.18■■□□□ 1.3
LRBA-212ENST00000514435 CASKIN1Q8WXD9 1431 aa23.16■■□□□ 1.3
LRBA-212ENST00000514435 EPRSP07814 1512 aaKnown RBP23.16■■□□□ 1.3
LRBA-212ENST00000514435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
LRBA-212ENST00000514435 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
LRBA-212ENST00000514435 KCNH8Q96L42 1107 aa23.11■■□□□ 1.29
LRBA-212ENST00000514435 FYCO1Q9BQS8 1478 aa23.11■■□□□ 1.29
LRBA-212ENST00000514435 GLI2P10070 1586 aa23.08■■□□□ 1.29
LRBA-212ENST00000514435 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
LRBA-212ENST00000514435 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
LRBA-212ENST00000514435 MAP3K4Q9Y6R4 1608 aa23.03■■□□□ 1.28
LRBA-212ENST00000514435 PPRC1Q5VV67 1664 aaKnown RBP23.02■■□□□ 1.28
LRBA-212ENST00000514435 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
LRBA-212ENST00000514435 MAGI3Q5TCQ9 1506 aa23.02■■□□□ 1.27
LRBA-212ENST00000514435 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
LRBA-212ENST00000514435 ABCA9Q8IUA7 1624 aa22.96■■□□□ 1.27
LRBA-212ENST00000514435 KIF14Q15058 1648 aa22.95■■□□□ 1.26
LRBA-212ENST00000514435 CFAP43Q8NDM7 1665 aa22.95■■□□□ 1.26
LRBA-212ENST00000514435 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.94■■□□□ 1.268e-8■■■□□ 14.8
LRBA-212ENST00000514435 TROQ12816 1431 aaPredicted RBP22.94■■□□□ 1.26
LRBA-212ENST00000514435 CD109Q6YHK3 1445 aa22.94■■□□□ 1.26
LRBA-212ENST00000514435 TTC37Q6PGP7 1564 aa22.94■■□□□ 1.26
LRBA-212ENST00000514435 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
LRBA-212ENST00000514435 TIAM1Q13009 1591 aa22.86■■□□□ 1.25
LRBA-212ENST00000514435 TEX14Q8IWB6 1497 aa22.82■■□□□ 1.24
LRBA-212ENST00000514435 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
LRBA-212ENST00000514435 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
LRBA-212ENST00000514435 KANK4Q5T7N3 995 aaPredicted RBP22.79■■□□□ 1.24
LRBA-212ENST00000514435 EHBP1L1Q8N3D4 1523 aa22.78■■□□□ 1.24
LRBA-212ENST00000514435 KDM6BO15054 1643 aa22.78■■□□□ 1.24
LRBA-212ENST00000514435 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
LRBA-212ENST00000514435 PLCH2O75038 1416 aa22.76■■□□□ 1.23
LRBA-212ENST00000514435 MAP3K1Q13233 1512 aa22.76■■□□□ 1.23
LRBA-212ENST00000514435 LRRC9Q6ZRR7 1453 aa22.76■■□□□ 1.23
LRBA-212ENST00000514435 FANCAO15360 1455 aa22.74■■□□□ 1.23
LRBA-212ENST00000514435 CDC42BPAQ5VT25 1732 aa22.73■■□□□ 1.23
LRBA-212ENST00000514435 CDC42BPBQ9Y5S2 1711 aa22.72■■□□□ 1.23
LRBA-212ENST00000514435 NEO1Q92859 1461 aa22.71■■□□□ 1.23
LRBA-212ENST00000514435 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
LRBA-212ENST00000514435 GPATCH8Q9UKJ3 1502 aaKnown RBP22.69■■□□□ 1.22
LRBA-212ENST00000514435 ARHGAP5Q13017 1502 aa22.69■■□□□ 1.22
LRBA-212ENST00000514435 NCOA2Q15596 1464 aa22.69■■□□□ 1.22
LRBA-212ENST00000514435 ARAP3Q8WWN8 1544 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms