RNA–Protein interactions for RNA: ENST00000514415.1

HOXC10-204, Transcript of homeobox C10, humanhuman

TSL 3

Gene HOXC10, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-204ENST00000514415 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
HOXC10-204ENST00000514415 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
HOXC10-204ENST00000514415 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
HOXC10-204ENST00000514415 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
HOXC10-204ENST00000514415 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.52
HOXC10-204ENST00000514415 NESP48681 1621 aa18.27■□□□□ 0.51
HOXC10-204ENST00000514415 PCF11O94913 1555 aaKnown RBP18.26■□□□□ 0.51
HOXC10-204ENST00000514415 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
HOXC10-204ENST00000514415 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
HOXC10-204ENST00000514415 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
HOXC10-204ENST00000514415 SAMD9Q5K651 1589 aa18.23■□□□□ 0.51
HOXC10-204ENST00000514415 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
HOXC10-204ENST00000514415 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
HOXC10-204ENST00000514415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.21■□□□□ 0.51
HOXC10-204ENST00000514415 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
HOXC10-204ENST00000514415 FMN1Q68DA7 1419 aa18.19■□□□□ 0.5
HOXC10-204ENST00000514415 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
HOXC10-204ENST00000514415 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
HOXC10-204ENST00000514415 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
HOXC10-204ENST00000514415 SNAPC4Q5SXM2 1469 aa18.1■□□□□ 0.49
HOXC10-204ENST00000514415 ACIN1Q9UKV3 1341 aaKnown RBP18.09■□□□□ 0.49
HOXC10-204ENST00000514415 LRRIQ1Q96JM4 1722 aa18.08■□□□□ 0.48
HOXC10-204ENST00000514415 SETD5Q9C0A6 1442 aa18.07■□□□□ 0.48
HOXC10-204ENST00000514415 FHOD3Q2V2M9 1422 aa18.06■□□□□ 0.48
HOXC10-204ENST00000514415 SUPT6HQ7KZ85 1726 aaKnown RBP18.05■□□□□ 0.48
HOXC10-204ENST00000514415 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
HOXC10-204ENST00000514415 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
HOXC10-204ENST00000514415 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
HOXC10-204ENST00000514415 ADAMTS12P58397 1594 aa18.03■□□□□ 0.48
HOXC10-204ENST00000514415 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
HOXC10-204ENST00000514415 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.47
HOXC10-204ENST00000514415 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
HOXC10-204ENST00000514415 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
HOXC10-204ENST00000514415 MAPKBP1O60336 1514 aa18■□□□□ 0.47
HOXC10-204ENST00000514415 HECW1Q76N89 1606 aa17.99■□□□□ 0.47
HOXC10-204ENST00000514415 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
HOXC10-204ENST00000514415 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
HOXC10-204ENST00000514415 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
HOXC10-204ENST00000514415 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
HOXC10-204ENST00000514415 WDR62O43379 1518 aa17.95■□□□□ 0.46
HOXC10-204ENST00000514415 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
HOXC10-204ENST00000514415 IFT140Q96RY7 1462 aa17.94■□□□□ 0.46
HOXC10-204ENST00000514415 UGGT2Q9NYU1 1516 aa17.93■□□□□ 0.46
HOXC10-204ENST00000514415 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
HOXC10-204ENST00000514415 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
HOXC10-204ENST00000514415 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
HOXC10-204ENST00000514415 MYOM3Q5VTT5 1437 aa17.89■□□□□ 0.46
HOXC10-204ENST00000514415 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
HOXC10-204ENST00000514415 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
HOXC10-204ENST00000514415 GCC2Q8IWJ2 1684 aa17.88■□□□□ 0.45
HOXC10-204ENST00000514415 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
HOXC10-204ENST00000514415 TCOF1Q13428 1488 aaKnown RBP17.87■□□□□ 0.45
HOXC10-204ENST00000514415 HFM1A2PYH4 1435 aa17.85■□□□□ 0.45
HOXC10-204ENST00000514415 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
HOXC10-204ENST00000514415 AKNAQ7Z591 1439 aa17.84■□□□□ 0.45
HOXC10-204ENST00000514415 MIER1Q8N108 512 aa17.84■□□□□ 0.45
HOXC10-204ENST00000514415 ITGAEP38570 1179 aa17.82■□□□□ 0.44
HOXC10-204ENST00000514415 MIA2Q96PC5 1412 aa17.81■□□□□ 0.44
HOXC10-204ENST00000514415 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
HOXC10-204ENST00000514415 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
HOXC10-204ENST00000514415 KIAA0586Q9BVV6 1533 aa17.8■□□□□ 0.44
HOXC10-204ENST00000514415 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
HOXC10-204ENST00000514415 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
HOXC10-204ENST00000514415 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
HOXC10-204ENST00000514415 MAGI3Q5TCQ9 1506 aa17.77■□□□□ 0.43
HOXC10-204ENST00000514415 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
HOXC10-204ENST00000514415 NAIPQ13075 1403 aa17.73■□□□□ 0.43
HOXC10-204ENST00000514415 RAPGEF6Q8TEU7 1601 aa17.73■□□□□ 0.43
HOXC10-204ENST00000514415 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
HOXC10-204ENST00000514415 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
HOXC10-204ENST00000514415 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
HOXC10-204ENST00000514415 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
HOXC10-204ENST00000514415 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
HOXC10-204ENST00000514415 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
HOXC10-204ENST00000514415 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
HOXC10-204ENST00000514415 DISP1Q96F81 1524 aa17.68■□□□□ 0.42
HOXC10-204ENST00000514415 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
HOXC10-204ENST00000514415 DNMT1P26358 1616 aaKnown RBP17.67■□□□□ 0.42
HOXC10-204ENST00000514415 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
HOXC10-204ENST00000514415 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
HOXC10-204ENST00000514415 CDK13Q14004 1512 aaKnown RBP17.63■□□□□ 0.41
HOXC10-204ENST00000514415 ADGBQ8N7X0 1667 aa17.63■□□□□ 0.41
HOXC10-204ENST00000514415 ROCK1Q13464 1354 aa17.63■□□□□ 0.41
HOXC10-204ENST00000514415 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
HOXC10-204ENST00000514415 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
HOXC10-204ENST00000514415 NUP153P49790 1475 aaKnown RBP17.59■□□□□ 0.41
HOXC10-204ENST00000514415 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
HOXC10-204ENST00000514415 SIN3AQ96ST3 1273 aa17.59■□□□□ 0.41
HOXC10-204ENST00000514415 CROCC2H7BZ55 1655 aa17.58■□□□□ 0.4
HOXC10-204ENST00000514415 NUP160Q12769 1436 aa17.57■□□□□ 0.4
HOXC10-204ENST00000514415 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
HOXC10-204ENST00000514415 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
HOXC10-204ENST00000514415 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
HOXC10-204ENST00000514415 KDM5BQ9UGL1 1544 aa17.54■□□□□ 0.4
HOXC10-204ENST00000514415 DAPK1P53355 1430 aa17.54■□□□□ 0.4
HOXC10-204ENST00000514415 TROQ12816 1431 aaPredicted RBP17.54■□□□□ 0.4
HOXC10-204ENST00000514415 POLR1AO95602 1720 aaPredicted RBP17.52■□□□□ 0.39
HOXC10-204ENST00000514415 KDM6BO15054 1643 aa17.5■□□□□ 0.39
HOXC10-204ENST00000514415 ABCA8O94911 1581 aa17.49■□□□□ 0.39
HOXC10-204ENST00000514415 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms