RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ABCC10Q5T3U5 1492 aa6.28□□□□□ -1.4
CHD1-211ENST00000514344 NPM1P06748 294 aaKnown RBP eCLIP6.26□□□□□ -1.41
CHD1-211ENST00000514344 DIP2BQ9P265 1576 aa6.26□□□□□ -1.41
CHD1-211ENST00000514344 PBRM1Q86U86 1689 aa6.25□□□□□ -1.41
CHD1-211ENST00000514344 ILDR2Q71H61 639 aa6.25□□□□□ -1.41
CHD1-211ENST00000514344 WDR97A6NE52 1622 aa6.24□□□□□ -1.41
CHD1-211ENST00000514344 SOCS7O14512 581 aa6.24□□□□□ -1.41
CHD1-211ENST00000514344 GRIN2AQ12879 1464 aa6.23□□□□□ -1.41
CHD1-211ENST00000514344 PRG4Q92954 1404 aaPredicted RBP6.22□□□□□ -1.41
CHD1-211ENST00000514344 PPP6R1Q9UPN7 881 aa6.22□□□□□ -1.41
CHD1-211ENST00000514344 DISP3Q9P2K9 1392 aa6.22□□□□□ -1.41
CHD1-211ENST00000514344 MAPKBP1O60336 1514 aa6.21□□□□□ -1.42
CHD1-211ENST00000514344 CUX1P39880 1505 aa6.21□□□□□ -1.42
CHD1-211ENST00000514344 SHROOM2Q13796 1616 aa6.2□□□□□ -1.42
CHD1-211ENST00000514344 NUP160Q12769 1436 aa6.2□□□□□ -1.42
CHD1-211ENST00000514344 JPH4Q96JJ6 628 aa6.19□□□□□ -1.42
CHD1-211ENST00000514344 TTBK1Q5TCY1 1321 aaPredicted RBP6.19□□□□□ -1.42
CHD1-211ENST00000514344 ADCY10Q96PN6 1610 aa6.18□□□□□ -1.42
CHD1-211ENST00000514344 ABCA5Q8WWZ7 1642 aa6.18□□□□□ -1.42
CHD1-211ENST00000514344 ADRA2BP18089 450 aa6.18□□□□□ -1.42
CHD1-211ENST00000514344 COL17A1Q9UMD9 1497 aaPredicted RBP6.16□□□□□ -1.42
CHD1-211ENST00000514344 ADAMTS12P58397 1594 aa6.16□□□□□ -1.42
CHD1-211ENST00000514344 ABCA10Q8WWZ4 1543 aa6.15□□□□□ -1.43
CHD1-211ENST00000514344 POTEHQ6S545 545 aa6.14□□□□□ -1.43
CHD1-211ENST00000514344 FHAD1B1AJZ9 1412 aa6.13□□□□□ -1.43
CHD1-211ENST00000514344 PPRC1Q5VV67 1664 aaKnown RBP6.13□□□□□ -1.43
CHD1-211ENST00000514344 TOP2BQ02880 1626 aa6.11□□□□□ -1.43
CHD1-211ENST00000514344 ASXL2Q76L83 1435 aa6.1□□□□□ -1.43
CHD1-211ENST00000514344 RUSC2Q8N2Y8 1516 aa6.09□□□□□ -1.43
CHD1-211ENST00000514344 CERKQ8TCT0 537 aa6.09□□□□□ -1.44
CHD1-211ENST00000514344 HSPA2P54652 639 aa6.08□□□□□ -1.44
CHD1-211ENST00000514344 WRNQ14191 1432 aaPredicted RBP eCLIP6.08□□□□□ -1.44
CHD1-211ENST00000514344 SPATA31D1Q6ZQQ2 1576 aa6.07□□□□□ -1.44
CHD1-211ENST00000514344 KIF21BO75037 1637 aa6.07□□□□□ -1.44
CHD1-211ENST00000514344 PLPPR3Q6T4P5 718 aa6.07□□□□□ -1.44
CHD1-211ENST00000514344 PTPRGP23470 1445 aa6.07□□□□□ -1.44
CHD1-211ENST00000514344 PLB1Q6P1J6 1458 aa6.06□□□□□ -1.44
CHD1-211ENST00000514344 ABCC2Q92887 1545 aa6.06□□□□□ -1.44
CHD1-211ENST00000514344 GLI2P10070 1586 aa6.06□□□□□ -1.44
CHD1-211ENST00000514344 PTPRMP28827 1452 aa6.06□□□□□ -1.44
CHD1-211ENST00000514344 TEX14Q8IWB6 1497 aa6.06□□□□□ -1.44
CHD1-211ENST00000514344 ERICH3Q5RHP9 1530 aa6.06□□□□□ -1.44
CHD1-211ENST00000514344 CUL7Q14999 1698 aa6.06□□□□□ -1.44
CHD1-211ENST00000514344 PCF11O94913 1555 aaKnown RBP6.05□□□□□ -1.44
CHD1-211ENST00000514344 MAP3K4Q9Y6R4 1608 aa6.05□□□□□ -1.44
CHD1-211ENST00000514344 EPRSP07814 1512 aaKnown RBP6.04□□□□□ -1.44
CHD1-211ENST00000514344 DMRT2Q9Y5R5 561 aa6.02□□□□□ -1.45
CHD1-211ENST00000514344 ARID4BQ4LE39 1312 aaPredicted RBP6.02□□□□□ -1.45
CHD1-211ENST00000514344 KIAA0586Q9BVV6 1533 aa6.01□□□□□ -1.45
CHD1-211ENST00000514344 KCNH8Q96L42 1107 aa6.01□□□□□ -1.45
CHD1-211ENST00000514344 TNIKQ9UKE5 1360 aa6□□□□□ -1.45
CHD1-211ENST00000514344 SRCAPQ6ZRS2 3230 aa6□□□□□ -1.45
CHD1-211ENST00000514344 ADAMTSL3P82987 1691 aa5.99□□□□□ -1.45
CHD1-211ENST00000514344 MADDQ8WXG6 1647 aa5.99□□□□□ -1.45
CHD1-211ENST00000514344 CD109Q6YHK3 1445 aa5.99□□□□□ -1.45
CHD1-211ENST00000514344 UACAQ9BZF9 1416 aa5.99□□□□□ -1.45
CHD1-211ENST00000514344 CARMIL2Q6F5E8 1435 aa5.99□□□□□ -1.45
CHD1-211ENST00000514344 ZCCHC11Q5TAX3 1644 aaKnown RBP5.98□□□□□ -1.45
CHD1-211ENST00000514344 RAPGEF3O95398 923 aa5.97□□□□□ -1.45
CHD1-211ENST00000514344 KDM5BQ9UGL1 1544 aa5.97□□□□□ -1.45
CHD1-211ENST00000514344 BIVM-ERCC5R4GMW8 1640 aa5.97□□□□□ -1.45
CHD1-211ENST00000514344 WDR7Q9Y4E6 1490 aa5.97□□□□□ -1.45
CHD1-211ENST00000514344 UHRF1BP1LA0JNW5 1464 aa5.96□□□□□ -1.45
CHD1-211ENST00000514344 RIMS1Q86UR5 1692 aaKnown RBP5.96□□□□□ -1.46
CHD1-211ENST00000514344 RNF39Q9H2S5 420 aa5.95□□□□□ -1.46
CHD1-211ENST00000514344 BCORL1Q5H9F3 1711 aa5.95□□□□□ -1.46
CHD1-211ENST00000514344 MAGI3Q5TCQ9 1506 aa5.95□□□□□ -1.46
CHD1-211ENST00000514344 CFAP43Q8NDM7 1665 aa5.93□□□□□ -1.46
CHD1-211ENST00000514344 ARID3CA6NKF2 412 aa5.93□□□□□ -1.46
CHD1-211ENST00000514344 MLECQ14165 292 aa5.93□□□□□ -1.46
CHD1-211ENST00000514344 IGF1RP08069 1367 aa5.93□□□□□ -1.46
CHD1-211ENST00000514344 DISP1Q96F81 1524 aa5.92□□□□□ -1.46
CHD1-211ENST00000514344 IQGAP2Q13576 1575 aa5.92□□□□□ -1.46
CHD1-211ENST00000514344 ARAP3Q8WWN8 1544 aa5.92□□□□□ -1.46
CHD1-211ENST00000514344 YEATS2Q9ULM3 1422 aa5.9□□□□□ -1.47
CHD1-211ENST00000514344 CEBPAP49715 358 aaPredicted RBP5.89□□□□□ -1.47
CHD1-211ENST00000514344 STRCQ7RTU9 1775 aa5.89□□□□□ -1.47
CHD1-211ENST00000514344 CARMIL1Q5VZK9 1371 aa5.89□□□□□ -1.47
CHD1-211ENST00000514344 UBAP1LF5GYI3 381 aa5.88□□□□□ -1.47
CHD1-211ENST00000514344 SCAF1Q9H7N4 1312 aaKnown RBP5.88□□□□□ -1.47
CHD1-211ENST00000514344 C1QBPQ07021 282 aaKnown RBP5.88□□□□□ -1.47
CHD1-211ENST00000514344 KIF27Q86VH2 1401 aa5.87□□□□□ -1.47
CHD1-211ENST00000514344 FRMPD1Q5SYB0 1578 aa5.87□□□□□ -1.47
CHD1-211ENST00000514344 KIAA0556O60303 1618 aa5.86□□□□□ -1.47
CHD1-211ENST00000514344 SUPT5HO00267 1087 aaKnown RBP5.86□□□□□ -1.47
CHD1-211ENST00000514344 MED1Q15648 1581 aaPredicted RBP5.86□□□□□ -1.47
CHD1-211ENST00000514344 PREX1Q8TCU6 1659 aa5.86□□□□□ -1.47
CHD1-211ENST00000514344 POGZQ7Z3K3 1410 aa5.86□□□□□ -1.47
CHD1-211ENST00000514344 FER1L4A9Z1Z3 1794 aa5.86□□□□□ -1.47
CHD1-211ENST00000514344 MAPK8IP2Q13387 824 aaPredicted RBP5.85□□□□□ -1.47
CHD1-211ENST00000514344 SIGLEC1Q9BZZ2 1709 aa5.85□□□□□ -1.47
CHD1-211ENST00000514344 ARHGEF40Q8TER5 1519 aa5.85□□□□□ -1.47
CHD1-211ENST00000514344 LTBP4Q8N2S1 1624 aa5.85□□□□□ -1.47
CHD1-211ENST00000514344 FANCAO15360 1455 aa5.85□□□□□ -1.47
CHD1-211ENST00000514344 PIP4K2BP78356 416 aa5.84□□□□□ -1.47
CHD1-211ENST00000514344 PHLDB1Q86UU1 1377 aa5.84□□□□□ -1.47
CHD1-211ENST00000514344 HSPA1LP34931 641 aa5.84□□□□□ -1.48
CHD1-211ENST00000514344 UGGT2Q9NYU1 1516 aa5.84□□□□□ -1.48
CHD1-211ENST00000514344 UHRF1BP1Q6BDS2 1440 aa5.84□□□□□ -1.48
CHD1-211ENST00000514344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms