RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
PRDM16-208ENST00000514189 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
PRDM16-208ENST00000514189 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
PRDM16-208ENST00000514189 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
PRDM16-208ENST00000514189 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.42
PRDM16-208ENST00000514189 TNIKQ9UKE5 1360 aa17.7■□□□□ 0.42
PRDM16-208ENST00000514189 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
PRDM16-208ENST00000514189 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
PRDM16-208ENST00000514189 RGL3Q3MIN7 710 aa17.68■□□□□ 0.42
PRDM16-208ENST00000514189 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRDM16-208ENST00000514189 GOLGA3Q08378 1498 aa17.67■□□□□ 0.42
PRDM16-208ENST00000514189 ZBTB47Q9UFB7 747 aaPredicted RBP17.65■□□□□ 0.42
PRDM16-208ENST00000514189 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
PRDM16-208ENST00000514189 KCNH8Q96L42 1107 aa17.64■□□□□ 0.42
PRDM16-208ENST00000514189 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
PRDM16-208ENST00000514189 ANP32EQ9BTT0 268 aa17.59■□□□□ 0.41
PRDM16-208ENST00000514189 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
PRDM16-208ENST00000514189 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
PRDM16-208ENST00000514189 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
PRDM16-208ENST00000514189 FOXD1Q16676 465 aa17.55■□□□□ 0.4
PRDM16-208ENST00000514189 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
PRDM16-208ENST00000514189 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
PRDM16-208ENST00000514189 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
PRDM16-208ENST00000514189 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
PRDM16-208ENST00000514189 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
PRDM16-208ENST00000514189 EEA1Q15075 1411 aa17.48■□□□□ 0.39
PRDM16-208ENST00000514189 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
PRDM16-208ENST00000514189 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
PRDM16-208ENST00000514189 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
PRDM16-208ENST00000514189 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
PRDM16-208ENST00000514189 LAS1LQ9Y4W2 734 aaKnown RBP17.45■□□□□ 0.38
PRDM16-208ENST00000514189 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
PRDM16-208ENST00000514189 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
PRDM16-208ENST00000514189 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
PRDM16-208ENST00000514189 NEFMP07197 916 aa17.43■□□□□ 0.38
PRDM16-208ENST00000514189 HSP90AA1P07900 732 aaKnown RBP17.43■□□□□ 0.38
PRDM16-208ENST00000514189 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
PRDM16-208ENST00000514189 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
PRDM16-208ENST00000514189 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
PRDM16-208ENST00000514189 ERCC6Q03468 1493 aa17.39■□□□□ 0.38
PRDM16-208ENST00000514189 KIF27Q86VH2 1401 aa17.39■□□□□ 0.37
PRDM16-208ENST00000514189 CFDP1Q9UEE9 299 aaPredicted RBP17.39■□□□□ 0.37
PRDM16-208ENST00000514189 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
PRDM16-208ENST00000514189 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
PRDM16-208ENST00000514189 RGS3P49796 1198 aa17.37■□□□□ 0.37
PRDM16-208ENST00000514189 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
PRDM16-208ENST00000514189 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
PRDM16-208ENST00000514189 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
PRDM16-208ENST00000514189 PPP4R2Q9NY27 417 aa17.34■□□□□ 0.37
PRDM16-208ENST00000514189 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
PRDM16-208ENST00000514189 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
PRDM16-208ENST00000514189 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.37
PRDM16-208ENST00000514189 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.36
PRDM16-208ENST00000514189 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
PRDM16-208ENST00000514189 RAB3GAP2Q9H2M9 1393 aa17.32■□□□□ 0.36
PRDM16-208ENST00000514189 PLEKHD1A6NEE1 506 aa17.3■□□□□ 0.36
PRDM16-208ENST00000514189 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
PRDM16-208ENST00000514189 CUX2O14529 1486 aa17.28■□□□□ 0.36
PRDM16-208ENST00000514189 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.35
PRDM16-208ENST00000514189 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
PRDM16-208ENST00000514189 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
PRDM16-208ENST00000514189 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
PRDM16-208ENST00000514189 CC2D2AQ9P2K1 1620 aa17.23■□□□□ 0.35
PRDM16-208ENST00000514189 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
PRDM16-208ENST00000514189 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
PRDM16-208ENST00000514189 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
PRDM16-208ENST00000514189 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
PRDM16-208ENST00000514189 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
PRDM16-208ENST00000514189 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
PRDM16-208ENST00000514189 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
PRDM16-208ENST00000514189 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
PRDM16-208ENST00000514189 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
PRDM16-208ENST00000514189 CCER2I3L3R5 266 aa17.17■□□□□ 0.34
PRDM16-208ENST00000514189 PKD2Q13563 968 aa17.15■□□□□ 0.34
PRDM16-208ENST00000514189 DHX57Q6P158 1386 aaKnown RBP17.15■□□□□ 0.34
PRDM16-208ENST00000514189 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRDM16-208ENST00000514189 HMGXB3Q12766 1538 aa17.14■□□□□ 0.33
PRDM16-208ENST00000514189 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
PRDM16-208ENST00000514189 SPRYD3Q8NCJ5 442 aa17.13■□□□□ 0.33
PRDM16-208ENST00000514189 MPHOSPH9Q99550 1183 aa17.13■□□□□ 0.33
PRDM16-208ENST00000514189 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
PRDM16-208ENST00000514189 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRDM16-208ENST00000514189 ANP32BQ92688 251 aaKnown RBP17.11■□□□□ 0.33
PRDM16-208ENST00000514189 CFTRP13569 1480 aa17.07■□□□□ 0.32
PRDM16-208ENST00000514189 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
PRDM16-208ENST00000514189 NESP48681 1621 aa17.06■□□□□ 0.32
PRDM16-208ENST00000514189 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
PRDM16-208ENST00000514189 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
PRDM16-208ENST00000514189 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
PRDM16-208ENST00000514189 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
PRDM16-208ENST00000514189 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
PRDM16-208ENST00000514189 FTSJ3Q8IY81 847 aaKnown RBP17.02■□□□□ 0.32
PRDM16-208ENST00000514189 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.32
PRDM16-208ENST00000514189 PEG3Q9GZU2 1588 aa17■□□□□ 0.31
PRDM16-208ENST00000514189 PLIN1O60240 522 aa17■□□□□ 0.31
PRDM16-208ENST00000514189 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
PRDM16-208ENST00000514189 BECN1Q14457 450 aa16.99■□□□□ 0.31
PRDM16-208ENST00000514189 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
PRDM16-208ENST00000514189 SOX12O15370 315 aa16.99■□□□□ 0.31
PRDM16-208ENST00000514189 ARHGAP35Q9NRY4 1499 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms