RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
HTT-213ENST00000513806 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.57
HTT-213ENST00000513806 GOLGA3Q08378 1498 aa18.63■□□□□ 0.57
HTT-213ENST00000513806 KIAA0586Q9BVV6 1533 aa18.63■□□□□ 0.57
HTT-213ENST00000513806 IQGAP2Q13576 1575 aa18.63■□□□□ 0.57
HTT-213ENST00000513806 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
HTT-213ENST00000513806 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
HTT-213ENST00000513806 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
HTT-213ENST00000513806 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
HTT-213ENST00000513806 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
HTT-213ENST00000513806 RANGAP1P46060 587 aaPredicted RBP18.59■□□□□ 0.57
HTT-213ENST00000513806 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.56
HTT-213ENST00000513806 ARHGEF11O15085 1522 aa18.58■□□□□ 0.56
HTT-213ENST00000513806 JPH4Q96JJ6 628 aa18.57■□□□□ 0.56
HTT-213ENST00000513806 PRG4Q92954 1404 aaPredicted RBP18.54■□□□□ 0.56
HTT-213ENST00000513806 UGGT2Q9NYU1 1516 aa18.5■□□□□ 0.55
HTT-213ENST00000513806 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
HTT-213ENST00000513806 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
HTT-213ENST00000513806 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
HTT-213ENST00000513806 KIAA0556O60303 1618 aa18.47■□□□□ 0.55
HTT-213ENST00000513806 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
HTT-213ENST00000513806 SAMD9Q5K651 1589 aa18.42■□□□□ 0.54
HTT-213ENST00000513806 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
HTT-213ENST00000513806 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
HTT-213ENST00000513806 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
HTT-213ENST00000513806 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
HTT-213ENST00000513806 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
HTT-213ENST00000513806 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.53
HTT-213ENST00000513806 PTPRGP23470 1445 aa18.32■□□□□ 0.52
HTT-213ENST00000513806 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
HTT-213ENST00000513806 CLIP1P30622 1438 aa18.31■□□□□ 0.52
HTT-213ENST00000513806 ADCY10Q96PN6 1610 aa18.28■□□□□ 0.52
HTT-213ENST00000513806 PLB1Q6P1J6 1458 aa18.27■□□□□ 0.52
HTT-213ENST00000513806 ABCA8O94911 1581 aa18.23■□□□□ 0.51
HTT-213ENST00000513806 ARID3CA6NKF2 412 aa18.22■□□□□ 0.51
HTT-213ENST00000513806 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
HTT-213ENST00000513806 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
HTT-213ENST00000513806 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
HTT-213ENST00000513806 LRRIQ1Q96JM4 1722 aa18.18■□□□□ 0.5
HTT-213ENST00000513806 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
HTT-213ENST00000513806 ZCCHC11Q5TAX3 1644 aaKnown RBP18.16■□□□□ 0.5
HTT-213ENST00000513806 ATP1B4Q9UN42 357 aaPredicted RBP18.15■□□□□ 0.5
HTT-213ENST00000513806 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.5
HTT-213ENST00000513806 FMN1Q68DA7 1419 aa18.14■□□□□ 0.49
HTT-213ENST00000513806 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
HTT-213ENST00000513806 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
HTT-213ENST00000513806 HECW1Q76N89 1606 aa18.09■□□□□ 0.49
HTT-213ENST00000513806 KDM5BQ9UGL1 1544 aa18.08■□□□□ 0.49
HTT-213ENST00000513806 ATP10BO94823 1461 aa18.07■□□□□ 0.48
HTT-213ENST00000513806 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
HTT-213ENST00000513806 NPM1P06748 294 aaKnown RBP eCLIP18.06■□□□□ 0.48
HTT-213ENST00000513806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
HTT-213ENST00000513806 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
HTT-213ENST00000513806 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
HTT-213ENST00000513806 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
HTT-213ENST00000513806 FYCO1Q9BQS8 1478 aa18.03■□□□□ 0.48
HTT-213ENST00000513806 ASXL2Q76L83 1435 aa18.01■□□□□ 0.47
HTT-213ENST00000513806 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
HTT-213ENST00000513806 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
HTT-213ENST00000513806 MAGI3Q5TCQ9 1506 aa17.96■□□□□ 0.47
HTT-213ENST00000513806 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
HTT-213ENST00000513806 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
HTT-213ENST00000513806 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
HTT-213ENST00000513806 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
HTT-213ENST00000513806 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
HTT-213ENST00000513806 TSPOAP1O95153 1857 aa17.94■□□□□ 0.46
HTT-213ENST00000513806 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
HTT-213ENST00000513806 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
HTT-213ENST00000513806 KIF14Q15058 1648 aa17.91■□□□□ 0.46
HTT-213ENST00000513806 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
HTT-213ENST00000513806 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
HTT-213ENST00000513806 FAM69CQ0P6D2 419 aa17.88■□□□□ 0.45
HTT-213ENST00000513806 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
HTT-213ENST00000513806 TTC37Q6PGP7 1564 aa17.85■□□□□ 0.45
HTT-213ENST00000513806 TROQ12816 1431 aaPredicted RBP17.84■□□□□ 0.45
HTT-213ENST00000513806 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
HTT-213ENST00000513806 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.45
HTT-213ENST00000513806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.45
HTT-213ENST00000513806 PPRC1Q5VV67 1664 aaKnown RBP17.83■□□□□ 0.44
HTT-213ENST00000513806 GLI2P10070 1586 aa17.83■□□□□ 0.44
HTT-213ENST00000513806 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
HTT-213ENST00000513806 ABCA9Q8IUA7 1624 aa17.82■□□□□ 0.44
HTT-213ENST00000513806 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
HTT-213ENST00000513806 EHBP1L1Q8N3D4 1523 aa17.81■□□□□ 0.44
HTT-213ENST00000513806 LRRC9Q6ZRR7 1453 aa17.8■□□□□ 0.44
HTT-213ENST00000513806 APLP2Q06481 763 aa17.79■□□□□ 0.44
HTT-213ENST00000513806 MAP3K1Q13233 1512 aa17.78■□□□□ 0.44
HTT-213ENST00000513806 CDC42BPAQ5VT25 1732 aa17.77■□□□□ 0.44
HTT-213ENST00000513806 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
HTT-213ENST00000513806 MYO5CQ9NQX4 1742 aa17.77■□□□□ 0.44
HTT-213ENST00000513806 CD109Q6YHK3 1445 aa17.75■□□□□ 0.43
HTT-213ENST00000513806 CDC42BPBQ9Y5S2 1711 aa17.75■□□□□ 0.43
HTT-213ENST00000513806 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
HTT-213ENST00000513806 PREX2Q70Z35 1606 aa17.7■□□□□ 0.42
HTT-213ENST00000513806 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
HTT-213ENST00000513806 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
HTT-213ENST00000513806 ITSN2Q9NZM3 1697 aa17.66■□□□□ 0.42
HTT-213ENST00000513806 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
HTT-213ENST00000513806 PLCH2O75038 1416 aa17.65■□□□□ 0.42
HTT-213ENST00000513806 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms