RNA–Protein interactions for RNA: ENST00000513462.1

NIFKP2-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 2, humanhuman

BASIC

Gene NIFKP2, Length 856 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP2-201ENST00000513462 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
NIFKP2-201ENST00000513462 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
NIFKP2-201ENST00000513462 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
NIFKP2-201ENST00000513462 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
NIFKP2-201ENST00000513462 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
NIFKP2-201ENST00000513462 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
NIFKP2-201ENST00000513462 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
NIFKP2-201ENST00000513462 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
NIFKP2-201ENST00000513462 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
NIFKP2-201ENST00000513462 CLIP1P30622 1438 aa16.6■□□□□ 0.25
NIFKP2-201ENST00000513462 CTTNBP2Q8WZ74 1663 aa16.59■□□□□ 0.25
NIFKP2-201ENST00000513462 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
NIFKP2-201ENST00000513462 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
NIFKP2-201ENST00000513462 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
NIFKP2-201ENST00000513462 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
NIFKP2-201ENST00000513462 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
NIFKP2-201ENST00000513462 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
NIFKP2-201ENST00000513462 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
NIFKP2-201ENST00000513462 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
NIFKP2-201ENST00000513462 EFCAB5A4FU69 1503 aa16.45■□□□□ 0.22
NIFKP2-201ENST00000513462 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
NIFKP2-201ENST00000513462 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
NIFKP2-201ENST00000513462 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
NIFKP2-201ENST00000513462 IQGAP2Q13576 1575 aa16.41■□□□□ 0.22
NIFKP2-201ENST00000513462 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
NIFKP2-201ENST00000513462 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
NIFKP2-201ENST00000513462 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
NIFKP2-201ENST00000513462 NUP160Q12769 1436 aa16.36■□□□□ 0.21
NIFKP2-201ENST00000513462 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
NIFKP2-201ENST00000513462 UGGT2Q9NYU1 1516 aa16.35■□□□□ 0.21
NIFKP2-201ENST00000513462 FBLN2P98095 1184 aa16.35■□□□□ 0.21
NIFKP2-201ENST00000513462 CHD1O14646 1710 aa16.35■□□□□ 0.21
NIFKP2-201ENST00000513462 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
NIFKP2-201ENST00000513462 APLP2Q06481 763 aa16.29■□□□□ 0.2
NIFKP2-201ENST00000513462 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
NIFKP2-201ENST00000513462 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
NIFKP2-201ENST00000513462 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
NIFKP2-201ENST00000513462 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
NIFKP2-201ENST00000513462 KIAA0556O60303 1618 aa16.25■□□□□ 0.19
NIFKP2-201ENST00000513462 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
NIFKP2-201ENST00000513462 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
NIFKP2-201ENST00000513462 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
NIFKP2-201ENST00000513462 FYCO1Q9BQS8 1478 aa16.22■□□□□ 0.19
NIFKP2-201ENST00000513462 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
NIFKP2-201ENST00000513462 JPH4Q96JJ6 628 aa16.22■□□□□ 0.19
NIFKP2-201ENST00000513462 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
NIFKP2-201ENST00000513462 PPARGC1BQ86YN6 1023 aaKnown RBP16.2■□□□□ 0.18
NIFKP2-201ENST00000513462 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
NIFKP2-201ENST00000513462 TIAM1Q13009 1591 aa16.18■□□□□ 0.18
NIFKP2-201ENST00000513462 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
NIFKP2-201ENST00000513462 CLASP1Q7Z460 1538 aa16.16■□□□□ 0.18
NIFKP2-201ENST00000513462 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
NIFKP2-201ENST00000513462 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
NIFKP2-201ENST00000513462 HECW1Q76N89 1606 aa16.13■□□□□ 0.17
NIFKP2-201ENST00000513462 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
NIFKP2-201ENST00000513462 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
NIFKP2-201ENST00000513462 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
NIFKP2-201ENST00000513462 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
NIFKP2-201ENST00000513462 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
NIFKP2-201ENST00000513462 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
NIFKP2-201ENST00000513462 RAPGEF6Q8TEU7 1601 aa16.09■□□□□ 0.17
NIFKP2-201ENST00000513462 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
NIFKP2-201ENST00000513462 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
NIFKP2-201ENST00000513462 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
NIFKP2-201ENST00000513462 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
NIFKP2-201ENST00000513462 ABCA8O94911 1581 aa16.03■□□□□ 0.16
NIFKP2-201ENST00000513462 PTPRGP23470 1445 aa16.02■□□□□ 0.15
NIFKP2-201ENST00000513462 NUP153P49790 1475 aaKnown RBP16.01■□□□□ 0.15
NIFKP2-201ENST00000513462 PLB1Q6P1J6 1458 aa16■□□□□ 0.15
NIFKP2-201ENST00000513462 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
NIFKP2-201ENST00000513462 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
NIFKP2-201ENST00000513462 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
NIFKP2-201ENST00000513462 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
NIFKP2-201ENST00000513462 SUPT6HQ7KZ85 1726 aaKnown RBP15.97■□□□□ 0.15
NIFKP2-201ENST00000513462 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
NIFKP2-201ENST00000513462 UACAQ9BZF9 1416 aa15.94■□□□□ 0.14
NIFKP2-201ENST00000513462 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
NIFKP2-201ENST00000513462 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
NIFKP2-201ENST00000513462 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
NIFKP2-201ENST00000513462 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
NIFKP2-201ENST00000513462 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
NIFKP2-201ENST00000513462 ABCC2Q92887 1545 aa15.9■□□□□ 0.14
NIFKP2-201ENST00000513462 UHRF1BP1LA0JNW5 1464 aa15.9■□□□□ 0.14
NIFKP2-201ENST00000513462 ATP10BO94823 1461 aa15.9■□□□□ 0.14
NIFKP2-201ENST00000513462 CCNB3Q8WWL7 1395 aa15.89■□□□□ 0.13
NIFKP2-201ENST00000513462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
NIFKP2-201ENST00000513462 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
NIFKP2-201ENST00000513462 ARID3CA6NKF2 412 aa15.87■□□□□ 0.13
NIFKP2-201ENST00000513462 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
NIFKP2-201ENST00000513462 TROQ12816 1431 aaPredicted RBP15.86■□□□□ 0.13
NIFKP2-201ENST00000513462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.13
NIFKP2-201ENST00000513462 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
NIFKP2-201ENST00000513462 PLEKHD1A6NEE1 506 aa15.83■□□□□ 0.12
NIFKP2-201ENST00000513462 FGD6Q6ZV73 1430 aa15.83■□□□□ 0.12
NIFKP2-201ENST00000513462 KDM5BQ9UGL1 1544 aa15.81■□□□□ 0.12
NIFKP2-201ENST00000513462 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
NIFKP2-201ENST00000513462 MIA2Q96PC5 1412 aa15.79■□□□□ 0.12
NIFKP2-201ENST00000513462 KIF14Q15058 1648 aa15.79■□□□□ 0.12
NIFKP2-201ENST00000513462 ITSN2Q9NZM3 1697 aa15.78■□□□□ 0.12
NIFKP2-201ENST00000513462 PTPN23Q9H3S7 1636 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms