RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 KIF21BO75037 1637 aa19.23■□□□□ 0.67
AP001999.1-201ENST00000513405 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
AP001999.1-201ENST00000513405 FOXD1Q16676 465 aa19.19■□□□□ 0.66
AP001999.1-201ENST00000513405 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
AP001999.1-201ENST00000513405 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
AP001999.1-201ENST00000513405 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
AP001999.1-201ENST00000513405 BICRAQ9NZM4 1560 aa19.13■□□□□ 0.65
AP001999.1-201ENST00000513405 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
AP001999.1-201ENST00000513405 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
AP001999.1-201ENST00000513405 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
AP001999.1-201ENST00000513405 IGF1RP08069 1367 aa19.07■□□□□ 0.64
AP001999.1-201ENST00000513405 CLSPNQ9HAW4 1339 aa19.06■□□□□ 0.64
AP001999.1-201ENST00000513405 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
AP001999.1-201ENST00000513405 SETD5Q9C0A6 1442 aa19.05■□□□□ 0.64
AP001999.1-201ENST00000513405 PHLDB1Q86UU1 1377 aa19.03■□□□□ 0.64
AP001999.1-201ENST00000513405 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
AP001999.1-201ENST00000513405 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
AP001999.1-201ENST00000513405 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
AP001999.1-201ENST00000513405 TSHZ2Q9NRE2 1034 aa18.98■□□□□ 0.63
AP001999.1-201ENST00000513405 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
AP001999.1-201ENST00000513405 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
AP001999.1-201ENST00000513405 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
AP001999.1-201ENST00000513405 PRXQ9BXM0 1461 aa18.96■□□□□ 0.63
AP001999.1-201ENST00000513405 CUX1P39880 1505 aa18.96■□□□□ 0.63
AP001999.1-201ENST00000513405 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
AP001999.1-201ENST00000513405 SLC4A1APQ9BWU0 796 aaKnown RBP18.92■□□□□ 0.62
AP001999.1-201ENST00000513405 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
AP001999.1-201ENST00000513405 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
AP001999.1-201ENST00000513405 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
AP001999.1-201ENST00000513405 EIF4G2P78344 907 aaKnown RBP eCLIP18.88■□□□□ 0.61
AP001999.1-201ENST00000513405 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
AP001999.1-201ENST00000513405 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
AP001999.1-201ENST00000513405 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
AP001999.1-201ENST00000513405 NCAPD3P42695 1498 aa18.83■□□□□ 0.6
AP001999.1-201ENST00000513405 NESP48681 1621 aa18.82■□□□□ 0.6
AP001999.1-201ENST00000513405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
AP001999.1-201ENST00000513405 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
AP001999.1-201ENST00000513405 B4GALNT3Q6L9W6 998 aa18.8■□□□□ 0.6
AP001999.1-201ENST00000513405 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
AP001999.1-201ENST00000513405 CFTRP13569 1480 aa18.78■□□□□ 0.6
AP001999.1-201ENST00000513405 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
AP001999.1-201ENST00000513405 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
AP001999.1-201ENST00000513405 RBM19Q9Y4C8 960 aaKnown RBP18.77■□□□□ 0.59
AP001999.1-201ENST00000513405 LRRC9Q6ZRR7 1453 aa18.76■□□□□ 0.59
AP001999.1-201ENST00000513405 ZNF644Q9H582 1327 aaPredicted RBP18.75■□□□□ 0.59
AP001999.1-201ENST00000513405 BCL11AQ9H165 835 aa18.75■□□□□ 0.59
AP001999.1-201ENST00000513405 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
AP001999.1-201ENST00000513405 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
AP001999.1-201ENST00000513405 ANP32EQ9BTT0 268 aa18.74■□□□□ 0.59
AP001999.1-201ENST00000513405 NBR1Q14596 966 aa18.74■□□□□ 0.59
AP001999.1-201ENST00000513405 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
AP001999.1-201ENST00000513405 CCDC184Q52MB2 194 aa18.72■□□□□ 0.59
AP001999.1-201ENST00000513405 CFDP1Q9UEE9 299 aaPredicted RBP18.72■□□□□ 0.59
AP001999.1-201ENST00000513405 NPM2Q86SE8 214 aaKnown RBP18.71■□□□□ 0.59
AP001999.1-201ENST00000513405 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
AP001999.1-201ENST00000513405 ERICH3Q5RHP9 1530 aa18.7■□□□□ 0.58
AP001999.1-201ENST00000513405 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
AP001999.1-201ENST00000513405 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
AP001999.1-201ENST00000513405 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
AP001999.1-201ENST00000513405 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
AP001999.1-201ENST00000513405 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
AP001999.1-201ENST00000513405 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
AP001999.1-201ENST00000513405 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
AP001999.1-201ENST00000513405 PRKCSHP14314 528 aaPredicted RBP18.6■□□□□ 0.57
AP001999.1-201ENST00000513405 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
AP001999.1-201ENST00000513405 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
AP001999.1-201ENST00000513405 PKD2Q13563 968 aa18.6■□□□□ 0.57
AP001999.1-201ENST00000513405 TSPY4P0CV99 314 aa18.58■□□□□ 0.56
AP001999.1-201ENST00000513405 TSPY10P0CW01 314 aa18.58■□□□□ 0.56
AP001999.1-201ENST00000513405 CARD11Q9BXL7 1154 aa18.58■□□□□ 0.56
AP001999.1-201ENST00000513405 TIAM1Q13009 1591 aa18.57■□□□□ 0.56
AP001999.1-201ENST00000513405 C11orf95C9JLR9 678 aaPredicted RBP18.56■□□□□ 0.56
AP001999.1-201ENST00000513405 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
AP001999.1-201ENST00000513405 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.56
AP001999.1-201ENST00000513405 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
AP001999.1-201ENST00000513405 POLA1P09884 1462 aaPredicted RBP18.54■□□□□ 0.56
AP001999.1-201ENST00000513405 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
AP001999.1-201ENST00000513405 NBPF8Q3BBV2 869 aa18.53■□□□□ 0.56
AP001999.1-201ENST00000513405 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
AP001999.1-201ENST00000513405 PTPRKQ15262 1439 aa18.5■□□□□ 0.55
AP001999.1-201ENST00000513405 PRKRIP1Q9H875 184 aaPredicted RBP18.5■□□□□ 0.55
AP001999.1-201ENST00000513405 NCOA2Q15596 1464 aa18.49■□□□□ 0.55
AP001999.1-201ENST00000513405 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
AP001999.1-201ENST00000513405 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
AP001999.1-201ENST00000513405 PCF11O94913 1555 aaKnown RBP18.49■□□□□ 0.55
AP001999.1-201ENST00000513405 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
AP001999.1-201ENST00000513405 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
AP001999.1-201ENST00000513405 HNRNPMP52272 730 aaKnown RBP eCLIP18.48■□□□□ 0.55
AP001999.1-201ENST00000513405 CASKIN1Q8WXD9 1431 aa18.47■□□□□ 0.55
AP001999.1-201ENST00000513405 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
AP001999.1-201ENST00000513405 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
AP001999.1-201ENST00000513405 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
AP001999.1-201ENST00000513405 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
AP001999.1-201ENST00000513405 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
AP001999.1-201ENST00000513405 UACAQ9BZF9 1416 aa18.44■□□□□ 0.54
AP001999.1-201ENST00000513405 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
AP001999.1-201ENST00000513405 RTN4Q9NQC3 1192 aaKnown RBP18.41■□□□□ 0.54
AP001999.1-201ENST00000513405 NAIPQ13075 1403 aa18.4■□□□□ 0.54
AP001999.1-201ENST00000513405 ST20-MTHFSA0A0A6YYL1 179 aa18.4■□□□□ 0.54
AP001999.1-201ENST00000513405 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms