RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 KIF21BO75037 1637 aa34.56■■■■□ 3.12
NEIL3-202ENST00000513321 EHMT2Q96KQ7 1210 aa34.55■■■■□ 3.12
NEIL3-202ENST00000513321 ARHGEF11O15085 1522 aa34.55■■■■□ 3.12
NEIL3-202ENST00000513321 SHROOM2Q13796 1616 aa34.51■■■■□ 3.11
NEIL3-202ENST00000513321 RIMBP3CA6NJZ7 1639 aa34.49■■■■□ 3.11
NEIL3-202ENST00000513321 RIMBP3BA6NNM3 1639 aa34.49■■■■□ 3.11
NEIL3-202ENST00000513321 RIMBP3Q9UFD9 1639 aa34.49■■■■□ 3.11
NEIL3-202ENST00000513321 IQGAP2Q13576 1575 aa34.48■■■■□ 3.11
NEIL3-202ENST00000513321 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
NEIL3-202ENST00000513321 GOLGA3Q08378 1498 aa34.44■■■■□ 3.1
NEIL3-202ENST00000513321 UBTFP17480 764 aaKnown RBP34.43■■■■□ 3.1
NEIL3-202ENST00000513321 CTTNBP2Q8WZ74 1663 aa34.41■■■■□ 3.1
NEIL3-202ENST00000513321 ERCC6L2Q5T890 1561 aa34.4■■■■□ 3.1
NEIL3-202ENST00000513321 CYB5RLQ6IPT4 315 aa34.33■■■■□ 3.09
NEIL3-202ENST00000513321 UGGT2Q9NYU1 1516 aa34.32■■■■□ 3.08
NEIL3-202ENST00000513321 ARAP1Q96P48 1450 aa34.31■■■■□ 3.08
NEIL3-202ENST00000513321 CARMIL2Q6F5E8 1435 aa34.29■■■■□ 3.08
NEIL3-202ENST00000513321 RANGAP1P46060 587 aaPredicted RBP34.25■■■■□ 3.07
NEIL3-202ENST00000513321 DISP1Q96F81 1524 aa34.24■■■■□ 3.07
NEIL3-202ENST00000513321 LOC105371045A0A1W2PR82 267 aa34.17■■■■□ 3.06
NEIL3-202ENST00000513321 TTBK1Q5TCY1 1321 aaPredicted RBP34.15■■■■□ 3.06
NEIL3-202ENST00000513321 TNIKQ9UKE5 1360 aa34.15■■■■□ 3.06
NEIL3-202ENST00000513321 KIAA0556O60303 1618 aa34.13■■■■□ 3.05
NEIL3-202ENST00000513321 P3H3Q8IVL6 736 aa34.13■■■■□ 3.05
NEIL3-202ENST00000513321 PTPRGP23470 1445 aa34.13■■■■□ 3.05
NEIL3-202ENST00000513321 SAMD9Q5K651 1589 aa34.03■■■■□ 3.04
NEIL3-202ENST00000513321 EFCAB5A4FU69 1503 aa33.97■■■■□ 3.03
NEIL3-202ENST00000513321 FHOD3Q2V2M9 1422 aa33.93■■■■□ 3.02
NEIL3-202ENST00000513321 ARHGAP35Q9NRY4 1499 aa33.92■■■■□ 3.02
NEIL3-202ENST00000513321 UACAQ9BZF9 1416 aa33.88■■■■□ 3.01
NEIL3-202ENST00000513321 CLIP1P30622 1438 aa33.86■■■■□ 3.01
NEIL3-202ENST00000513321 PLB1Q6P1J6 1458 aa33.83■■■■□ 3.01
NEIL3-202ENST00000513321 ADCY10Q96PN6 1610 aa33.82■■■■□ 3
NEIL3-202ENST00000513321 CEP162Q5TB80 1403 aa33.8■■■■□ 3
NEIL3-202ENST00000513321 NPM1P06748 294 aaKnown RBP eCLIP33.79■■■■□ 3
NEIL3-202ENST00000513321 UHRF1BP1LA0JNW5 1464 aa33.79■■■■□ 3
NEIL3-202ENST00000513321 ABCC2Q92887 1545 aa33.76■■■■□ 3
NEIL3-202ENST00000513321 ABCA8O94911 1581 aa33.76■■■□□ 2.99
NEIL3-202ENST00000513321 FMN1Q68DA7 1419 aa33.7■■■□□ 2.99
NEIL3-202ENST00000513321 RAPGEF6Q8TEU7 1601 aa33.64■■■□□ 2.98
NEIL3-202ENST00000513321 KDM5BQ9UGL1 1544 aa33.64■■■□□ 2.98
NEIL3-202ENST00000513321 ARID3CA6NKF2 412 aa33.63■■■□□ 2.97
NEIL3-202ENST00000513321 ATP1B4Q9UN42 357 aaPredicted RBP33.59■■■□□ 2.97
NEIL3-202ENST00000513321 NUP153P49790 1475 aaKnown RBP33.56■■■□□ 2.96
NEIL3-202ENST00000513321 ATP10BO94823 1461 aa33.55■■■□□ 2.96
NEIL3-202ENST00000513321 ZCCHC11Q5TAX3 1644 aaKnown RBP33.53■■■□□ 2.96
NEIL3-202ENST00000513321 MAPKBP1O60336 1514 aa33.52■■■□□ 2.96
NEIL3-202ENST00000513321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.5■■■□□ 2.95
NEIL3-202ENST00000513321 HNRNPUL2Q1KMD3 747 aaKnown RBP33.5■■■□□ 2.95
NEIL3-202ENST00000513321 TRHP20396 242 aaPredicted RBP33.49■■■□□ 2.95
NEIL3-202ENST00000513321 CASKIN1Q8WXD9 1431 aa33.49■■■□□ 2.95
NEIL3-202ENST00000513321 ASXL2Q76L83 1435 aa33.48■■■□□ 2.95
NEIL3-202ENST00000513321 HECW1Q76N89 1606 aa33.44■■■□□ 2.94
NEIL3-202ENST00000513321 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
NEIL3-202ENST00000513321 EPRSP07814 1512 aaKnown RBP33.4■■■□□ 2.94
NEIL3-202ENST00000513321 FYCO1Q9BQS8 1478 aa33.4■■■□□ 2.94
NEIL3-202ENST00000513321 CDK13Q14004 1512 aaKnown RBP33.37■■■□□ 2.93
NEIL3-202ENST00000513321 ABCC10Q5T3U5 1492 aa33.36■■■□□ 2.93
NEIL3-202ENST00000513321 VPS8Q8N3P4 1428 aa33.36■■■□□ 2.93
NEIL3-202ENST00000513321 WDR7Q9Y4E6 1490 aa33.35■■■□□ 2.93
NEIL3-202ENST00000513321 FAM69CQ0P6D2 419 aa33.35■■■□□ 2.93
NEIL3-202ENST00000513321 PLEKHD1A6NEE1 506 aa33.34■■■□□ 2.93
NEIL3-202ENST00000513321 KCNH8Q96L42 1107 aa33.33■■■□□ 2.93
NEIL3-202ENST00000513321 CDK11AQ9UQ88 783 aaPredicted RBP33.28■■■□□ 2.92
NEIL3-202ENST00000513321 CCDC18Q5T9S5 1454 aa33.27■■■□□ 2.92
NEIL3-202ENST00000513321 DIP2BQ9P265 1576 aa33.27■■■□□ 2.92
NEIL3-202ENST00000513321 LRRIQ1Q96JM4 1722 aa33.26■■■□□ 2.92
NEIL3-202ENST00000513321 KIF13AQ9H1H9 1805 aa33.21■■■□□ 2.91
NEIL3-202ENST00000513321 GLI2P10070 1586 aa33.18■■■□□ 2.9
NEIL3-202ENST00000513321 TROQ12816 1431 aaPredicted RBP33.12■■■□□ 2.89
NEIL3-202ENST00000513321 MAGI3Q5TCQ9 1506 aa33.08■■■□□ 2.89
NEIL3-202ENST00000513321 APLP2Q06481 763 aa33.06■■■□□ 2.88
NEIL3-202ENST00000513321 CD109Q6YHK3 1445 aa33.05■■■□□ 2.88
NEIL3-202ENST00000513321 MTUS2Q5JR59 1369 aa33.04■■■□□ 2.88
NEIL3-202ENST00000513321 MAP3K4Q9Y6R4 1608 aa33.02■■■□□ 2.88
NEIL3-202ENST00000513321 TIAM1Q13009 1591 aa33.02■■■□□ 2.88
NEIL3-202ENST00000513321 ABCA9Q8IUA7 1624 aa33.01■■■□□ 2.87
NEIL3-202ENST00000513321 MAP3K1Q13233 1512 aa32.99■■■□□ 2.87
NEIL3-202ENST00000513321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.99■■■□□ 2.87
NEIL3-202ENST00000513321 CFAP43Q8NDM7 1665 aa32.99■■■□□ 2.87
NEIL3-202ENST00000513321 TSPOAP1O95153 1857 aa32.98■■■□□ 2.87
NEIL3-202ENST00000513321 KIF14Q15058 1648 aa32.96■■■□□ 2.87
NEIL3-202ENST00000513321 KANK4Q5T7N3 995 aaPredicted RBP32.95■■■□□ 2.87
NEIL3-202ENST00000513321 TTC37Q6PGP7 1564 aa32.92■■■□□ 2.86
NEIL3-202ENST00000513321 LRRC9Q6ZRR7 1453 aa32.91■■■□□ 2.86
NEIL3-202ENST00000513321 EHBP1L1Q8N3D4 1523 aa32.91■■■□□ 2.86
NEIL3-202ENST00000513321 PPRC1Q5VV67 1664 aaKnown RBP32.9■■■□□ 2.86
NEIL3-202ENST00000513321 TEX14Q8IWB6 1497 aa32.88■■■□□ 2.85
NEIL3-202ENST00000513321 PLCH2O75038 1416 aa32.84■■■□□ 2.85
NEIL3-202ENST00000513321 CCNB3Q8WWL7 1395 aa32.78■■■□□ 2.84
NEIL3-202ENST00000513321 NCOA2Q15596 1464 aa32.77■■■□□ 2.84
NEIL3-202ENST00000513321 EFCAB2Q5VUJ9 269 aa32.77■■■□□ 2.84
NEIL3-202ENST00000513321 FANCAO15360 1455 aa32.75■■■□□ 2.83
NEIL3-202ENST00000513321 MYO5CQ9NQX4 1742 aa32.75■■■□□ 2.83
NEIL3-202ENST00000513321 SUPT6HQ7KZ85 1726 aaKnown RBP32.75■■■□□ 2.83
NEIL3-202ENST00000513321 GPATCH8Q9UKJ3 1502 aaKnown RBP32.74■■■□□ 2.83
NEIL3-202ENST00000513321 NEO1Q92859 1461 aa32.73■■■□□ 2.83
NEIL3-202ENST00000513321 PHLDB1Q86UU1 1377 aa32.72■■■□□ 2.83
NEIL3-202ENST00000513321 ARAP3Q8WWN8 1544 aa32.72■■■□□ 2.83
NEIL3-202ENST00000513321 ARHGAP5Q13017 1502 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms