RNA–Protein interactions for RNA: ENST00000513291.1

ATR-206, Transcript of ATR serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATR, Length 5,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-206ENST00000513291 VPS8Q8N3P4 1428 aa8.56□□□□□ -1.04
ATR-206ENST00000513291 MRC2Q9UBG0 1479 aa8.55□□□□□ -1.04
ATR-206ENST00000513291 NESP48681 1621 aa8.55□□□□□ -1.04
ATR-206ENST00000513291 LAMC3Q9Y6N6 1575 aa8.54□□□□□ -1.04
ATR-206ENST00000513291 GAPVD1Q14C86 1478 aa8.54□□□□□ -1.04
ATR-206ENST00000513291 TSPY4P0CV99 314 aa8.54□□□□□ -1.04
ATR-206ENST00000513291 TSPY10P0CW01 314 aa8.54□□□□□ -1.04
ATR-206ENST00000513291 FMN1Q68DA7 1419 aa8.54□□□□□ -1.04
ATR-206ENST00000513291 RAD54L2Q9Y4B4 1467 aa8.52□□□□□ -1.05
ATR-206ENST00000513291 SYNJ1O43426 1573 aa8.52□□□□□ -1.05
ATR-206ENST00000513291 RUSC2Q8N2Y8 1516 aa8.52□□□□□ -1.05
ATR-206ENST00000513291 TOP2BQ02880 1626 aa8.52□□□□□ -1.05
ATR-206ENST00000513291 ACIN1Q9UKV3 1341 aaKnown RBP8.51□□□□□ -1.05
ATR-206ENST00000513291 DNMBPQ6XZF7 1577 aa8.5□□□□□ -1.05
ATR-206ENST00000513291 KCNH8Q96L42 1107 aa8.5□□□□□ -1.05
ATR-206ENST00000513291 TOPBP1Q92547 1522 aa8.5□□□□□ -1.05
ATR-206ENST00000513291 CHIC2Q9UKJ5 165 aa8.5□□□□□ -1.05
ATR-206ENST00000513291 CFDP1Q9UEE9 299 aaPredicted RBP8.49□□□□□ -1.05
ATR-206ENST00000513291 ESF1Q9H501 851 aaKnown RBP8.49□□□□□ -1.05
ATR-206ENST00000513291 CUX1P39880 1505 aa8.49□□□□□ -1.05
ATR-206ENST00000513291 IGF1RP08069 1367 aa8.48□□□□□ -1.05
ATR-206ENST00000513291 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
ATR-206ENST00000513291 ZNF326Q5BKZ1 582 aaKnown RBP8.48□□□□□ -1.05
ATR-206ENST00000513291 CCNB3Q8WWL7 1395 aa8.47□□□□□ -1.05
ATR-206ENST00000513291 GRIN2BQ13224 1484 aa8.47□□□□□ -1.05
ATR-206ENST00000513291 TONSLQ96HA7 1378 aa8.46□□□□□ -1.05
ATR-206ENST00000513291 POLA1P09884 1462 aaPredicted RBP8.46□□□□□ -1.06
ATR-206ENST00000513291 FHOD3Q2V2M9 1422 aa8.46□□□□□ -1.06
ATR-206ENST00000513291 KIF21BO75037 1637 aa8.45□□□□□ -1.06
ATR-206ENST00000513291 ARHGAP35Q9NRY4 1499 aa8.45□□□□□ -1.06
ATR-206ENST00000513291 ERICH3Q5RHP9 1530 aa8.45□□□□□ -1.06
ATR-206ENST00000513291 AQRO60306 1485 aaKnown RBP eCLIP8.44□□□□□ -1.063e-6■■■■■ 27.8
ATR-206ENST00000513291 JPH4Q96JJ6 628 aa8.44□□□□□ -1.06
ATR-206ENST00000513291 DNAJC5BQ9UF47 199 aa8.43□□□□□ -1.06
ATR-206ENST00000513291 DIEXFQ68CQ4 756 aaKnown RBP8.42□□□□□ -1.06
ATR-206ENST00000513291 RRP7BPQ9NSQ0 103 aa8.42□□□□□ -1.06
ATR-206ENST00000513291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATR-206ENST00000513291 SLC4A1APQ9BWU0 796 aaKnown RBP8.42□□□□□ -1.06
ATR-206ENST00000513291 ANP32EQ9BTT0 268 aa8.41□□□□□ -1.06
ATR-206ENST00000513291 HAP1P54257 671 aaPredicted RBP8.4□□□□□ -1.06
ATR-206ENST00000513291 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
ATR-206ENST00000513291 ABCA10Q8WWZ4 1543 aa8.4□□□□□ -1.07
ATR-206ENST00000513291 CCDC18Q5T9S5 1454 aa8.4□□□□□ -1.07
ATR-206ENST00000513291 SCAF1Q9H7N4 1312 aaKnown RBP8.4□□□□□ -1.07
ATR-206ENST00000513291 STAG3Q9UJ98 1225 aa8.39□□□□□ -1.07
ATR-206ENST00000513291 BCANQ96GW7 911 aa8.38□□□□□ -1.07
ATR-206ENST00000513291 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
ATR-206ENST00000513291 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
ATR-206ENST00000513291 PTPRGP23470 1445 aa8.37□□□□□ -1.07
ATR-206ENST00000513291 CHGAP10645 457 aaKnown RBP8.37□□□□□ -1.07
ATR-206ENST00000513291 KANK4Q5T7N3 995 aaPredicted RBP8.37□□□□□ -1.07
ATR-206ENST00000513291 BIVM-ERCC5R4GMW8 1640 aa8.37□□□□□ -1.07
ATR-206ENST00000513291 CNGB1Q14028 1251 aaPredicted RBP8.37□□□□□ -1.07
ATR-206ENST00000513291 AMER1Q5JTC6 1135 aaPredicted RBP8.37□□□□□ -1.07
ATR-206ENST00000513291 OSCARQ8IYS5 282 aa8.37□□□□□ -1.07
ATR-206ENST00000513291 SNAPC4Q5SXM2 1469 aa8.36□□□□□ -1.07
ATR-206ENST00000513291 URB2Q14146 1524 aaKnown RBP8.35□□□□□ -1.07
ATR-206ENST00000513291 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
ATR-206ENST00000513291 EFCAB5A4FU69 1503 aa8.35□□□□□ -1.07
ATR-206ENST00000513291 ANP32CO43423 234 aa8.35□□□□□ -1.07
ATR-206ENST00000513291 CUL7Q14999 1698 aa8.35□□□□□ -1.07
ATR-206ENST00000513291 CLSPNQ9HAW4 1339 aa8.35□□□□□ -1.07
ATR-206ENST00000513291 TULP1O00294 542 aaPredicted RBP8.33□□□□□ -1.08
ATR-206ENST00000513291 EFCAB2Q5VUJ9 269 aa8.33□□□□□ -1.08
ATR-206ENST00000513291 PRKCSHP14314 528 aaPredicted RBP8.32□□□□□ -1.08
ATR-206ENST00000513291 HOMEZQ8IX15 550 aa8.32□□□□□ -1.08
ATR-206ENST00000513291 SETD5Q9C0A6 1442 aa8.31□□□□□ -1.08
ATR-206ENST00000513291 C14orf37Q86TY3 774 aa8.31□□□□□ -1.08
ATR-206ENST00000513291 KANK1Q14678 1352 aa8.3□□□□□ -1.08
ATR-206ENST00000513291 CASKIN1Q8WXD9 1431 aa8.3□□□□□ -1.08
ATR-206ENST00000513291 MAGI1Q96QZ7 1491 aaPredicted RBP8.3□□□□□ -1.08
ATR-206ENST00000513291 FYCO1Q9BQS8 1478 aa8.3□□□□□ -1.08
ATR-206ENST00000513291 ANKRD30AQ9BXX3 1397 aa8.29□□□□□ -1.08
ATR-206ENST00000513291 PRDM2Q13029 1718 aa8.29□□□□□ -1.08
ATR-206ENST00000513291 RSPH4AQ5TD94 716 aa8.29□□□□□ -1.08
ATR-206ENST00000513291 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
ATR-206ENST00000513291 PLPPR3Q6T4P5 718 aa8.29□□□□□ -1.08
ATR-206ENST00000513291 SYNJ2O15056 1496 aa8.29□□□□□ -1.08
ATR-206ENST00000513291 PRG4Q92954 1404 aaPredicted RBP8.28□□□□□ -1.08
ATR-206ENST00000513291 KIAA0586Q9BVV6 1533 aa8.28□□□□□ -1.08
ATR-206ENST00000513291 TRHP20396 242 aaPredicted RBP8.27□□□□□ -1.09
ATR-206ENST00000513291 KDM2AQ9Y2K7 1162 aa8.27□□□□□ -1.09
ATR-206ENST00000513291 ARAP1Q96P48 1450 aa8.27□□□□□ -1.09
ATR-206ENST00000513291 IQGAP2Q13576 1575 aa8.27□□□□□ -1.09
ATR-206ENST00000513291 GRIN2AQ12879 1464 aa8.25□□□□□ -1.09
ATR-206ENST00000513291 LRRC9Q6ZRR7 1453 aa8.25□□□□□ -1.09
ATR-206ENST00000513291 HECW1Q76N89 1606 aa8.24□□□□□ -1.09
ATR-206ENST00000513291 EIF4G2P78344 907 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATR-206ENST00000513291 RAB3GAP2Q9H2M9 1393 aa8.24□□□□□ -1.09
ATR-206ENST00000513291 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
ATR-206ENST00000513291 CDK11BP21127 795 aaKnown RBP8.23□□□□□ -1.09
ATR-206ENST00000513291 KIF21AQ7Z4S6 1674 aa8.23□□□□□ -1.09
ATR-206ENST00000513291 ZNF608Q9ULD9 1512 aaPredicted RBP8.23□□□□□ -1.09
ATR-206ENST00000513291 MYOM3Q5VTT5 1437 aa8.23□□□□□ -1.09
ATR-206ENST00000513291 SPAG9O60271 1321 aaKnown RBP8.23□□□□□ -1.09
ATR-206ENST00000513291 TPRNQ4KMQ1 711 aa8.23□□□□□ -1.09
ATR-206ENST00000513291 CYB5RLQ6IPT4 315 aa8.23□□□□□ -1.09
ATR-206ENST00000513291 TIMELESSQ9UNS1 1208 aa8.23□□□□□ -1.09
ATR-206ENST00000513291 HNRNPMP52272 730 aaKnown RBP eCLIP8.22□□□□□ -1.09
ATR-206ENST00000513291 RGL3Q3MIN7 710 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms