RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
DHFR-206ENST00000513048 SNAPC4Q5SXM2 1469 aa15.13■□□□□ 0.01
DHFR-206ENST00000513048 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
DHFR-206ENST00000513048 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
DHFR-206ENST00000513048 CEP162Q5TB80 1403 aa15.08■□□□□ 0
DHFR-206ENST00000513048 SYNJ2O15056 1496 aa15.06■□□□□ 0
DHFR-206ENST00000513048 CTTNBP2Q8WZ74 1663 aa15.04■□□□□ -0
DHFR-206ENST00000513048 GRIN2AQ12879 1464 aa15.03■□□□□ -0
DHFR-206ENST00000513048 CLIP1P30622 1438 aa15□□□□□ -0.01
DHFR-206ENST00000513048 NUP160Q12769 1436 aa14.96□□□□□ -0.01
DHFR-206ENST00000513048 CEP170Q5SW79 1584 aa14.96□□□□□ -0.01
DHFR-206ENST00000513048 CHD1O14646 1710 aa14.95□□□□□ -0.02
DHFR-206ENST00000513048 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
DHFR-206ENST00000513048 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
DHFR-206ENST00000513048 KIAA0586Q9BVV6 1533 aa14.93□□□□□ -0.02
DHFR-206ENST00000513048 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
DHFR-206ENST00000513048 IQGAP2Q13576 1575 aa14.93□□□□□ -0.02
DHFR-206ENST00000513048 SAMD9Q5K651 1589 aa14.9□□□□□ -0.02
DHFR-206ENST00000513048 EFCAB5A4FU69 1503 aa14.9□□□□□ -0.02
DHFR-206ENST00000513048 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
DHFR-206ENST00000513048 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
DHFR-206ENST00000513048 FBLN2P98095 1184 aa14.89□□□□□ -0.03
DHFR-206ENST00000513048 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
DHFR-206ENST00000513048 DISP1Q96F81 1524 aa14.82□□□□□ -0.04
DHFR-206ENST00000513048 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
DHFR-206ENST00000513048 FHOD3Q2V2M9 1422 aa14.81□□□□□ -0.04
DHFR-206ENST00000513048 KIAA0556O60303 1618 aa14.8□□□□□ -0.04
DHFR-206ENST00000513048 SHROOM2Q13796 1616 aa14.8□□□□□ -0.04
DHFR-206ENST00000513048 P3H3Q8IVL6 736 aa14.78□□□□□ -0.04
DHFR-206ENST00000513048 JPH4Q96JJ6 628 aa14.77□□□□□ -0.05
DHFR-206ENST00000513048 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
DHFR-206ENST00000513048 PCF11O94913 1555 aaKnown RBP14.73□□□□□ -0.05
DHFR-206ENST00000513048 FMN1Q68DA7 1419 aa14.73□□□□□ -0.05
DHFR-206ENST00000513048 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
DHFR-206ENST00000513048 PRG4Q92954 1404 aaPredicted RBP14.71□□□□□ -0.05
DHFR-206ENST00000513048 CARMIL2Q6F5E8 1435 aa14.7□□□□□ -0.06
DHFR-206ENST00000513048 FYCO1Q9BQS8 1478 aa14.69□□□□□ -0.06
DHFR-206ENST00000513048 ERCC6L2Q5T890 1561 aa14.68□□□□□ -0.06
DHFR-206ENST00000513048 MAP3K1Q13233 1512 aa14.67□□□□□ -0.06
DHFR-206ENST00000513048 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
DHFR-206ENST00000513048 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
DHFR-206ENST00000513048 TIAM1Q13009 1591 aa14.64□□□□□ -0.07
DHFR-206ENST00000513048 CFAP43Q8NDM7 1665 aa14.64□□□□□ -0.07
DHFR-206ENST00000513048 ABCA8O94911 1581 aa14.62□□□□□ -0.07
DHFR-206ENST00000513048 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
DHFR-206ENST00000513048 HECW1Q76N89 1606 aa14.62□□□□□ -0.07
DHFR-206ENST00000513048 RAPGEF6Q8TEU7 1601 aa14.62□□□□□ -0.07
DHFR-206ENST00000513048 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
DHFR-206ENST00000513048 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
DHFR-206ENST00000513048 PLB1Q6P1J6 1458 aa14.6□□□□□ -0.07
DHFR-206ENST00000513048 PTPRGP23470 1445 aa14.59□□□□□ -0.07
DHFR-206ENST00000513048 NUP153P49790 1475 aaKnown RBP14.59□□□□□ -0.07
DHFR-206ENST00000513048 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
DHFR-206ENST00000513048 EPRSP07814 1512 aaKnown RBP14.57□□□□□ -0.08
DHFR-206ENST00000513048 APLP2Q06481 763 aa14.57□□□□□ -0.08
DHFR-206ENST00000513048 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
DHFR-206ENST00000513048 CCDC18Q5T9S5 1454 aa14.56□□□□□ -0.08
DHFR-206ENST00000513048 TTBK1Q5TCY1 1321 aaPredicted RBP14.55□□□□□ -0.08
DHFR-206ENST00000513048 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
DHFR-206ENST00000513048 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
DHFR-206ENST00000513048 MAGI3Q5TCQ9 1506 aa14.53□□□□□ -0.08
DHFR-206ENST00000513048 UACAQ9BZF9 1416 aa14.52□□□□□ -0.08
DHFR-206ENST00000513048 UHRF1BP1LA0JNW5 1464 aa14.5□□□□□ -0.09
DHFR-206ENST00000513048 ABCC2Q92887 1545 aa14.5□□□□□ -0.09
DHFR-206ENST00000513048 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
DHFR-206ENST00000513048 ATP10BO94823 1461 aa14.49□□□□□ -0.09
DHFR-206ENST00000513048 EHBP1L1Q8N3D4 1523 aa14.48□□□□□ -0.09
DHFR-206ENST00000513048 ARHGEF11O15085 1522 aa14.47□□□□□ -0.09
DHFR-206ENST00000513048 ARID3CA6NKF2 412 aa14.45□□□□□ -0.1
DHFR-206ENST00000513048 ADCY10Q96PN6 1610 aa14.44□□□□□ -0.1
DHFR-206ENST00000513048 MTUS2Q5JR59 1369 aa14.44□□□□□ -0.1
DHFR-206ENST00000513048 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
DHFR-206ENST00000513048 RIMBP3CA6NJZ7 1639 aa14.42□□□□□ -0.1
DHFR-206ENST00000513048 RIMBP3BA6NNM3 1639 aa14.42□□□□□ -0.1
DHFR-206ENST00000513048 RIMBP3Q9UFD9 1639 aa14.42□□□□□ -0.1
DHFR-206ENST00000513048 SUPT6HQ7KZ85 1726 aaKnown RBP14.42□□□□□ -0.1
DHFR-206ENST00000513048 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
DHFR-206ENST00000513048 TROQ12816 1431 aaPredicted RBP14.41□□□□□ -0.1
DHFR-206ENST00000513048 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
DHFR-206ENST00000513048 NCOA2Q15596 1464 aa14.41□□□□□ -0.1
DHFR-206ENST00000513048 ZCCHC11Q5TAX3 1644 aaKnown RBP14.41□□□□□ -0.1
DHFR-206ENST00000513048 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
DHFR-206ENST00000513048 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
DHFR-206ENST00000513048 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
DHFR-206ENST00000513048 KIF14Q15058 1648 aa14.37□□□□□ -0.11
DHFR-206ENST00000513048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
DHFR-206ENST00000513048 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
DHFR-206ENST00000513048 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
DHFR-206ENST00000513048 ABCC10Q5T3U5 1492 aa14.34□□□□□ -0.11
DHFR-206ENST00000513048 PLEKHD1A6NEE1 506 aa14.34□□□□□ -0.11
DHFR-206ENST00000513048 CCNB3Q8WWL7 1395 aa14.33□□□□□ -0.12
DHFR-206ENST00000513048 FGD6Q6ZV73 1430 aa14.32□□□□□ -0.12
DHFR-206ENST00000513048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.122e-9■■■■■ 39.6
DHFR-206ENST00000513048 TCOF1Q13428 1488 aaKnown RBP14.29□□□□□ -0.12
DHFR-206ENST00000513048 GPATCH8Q9UKJ3 1502 aaKnown RBP14.29□□□□□ -0.12
DHFR-206ENST00000513048 MIA2Q96PC5 1412 aa14.28□□□□□ -0.12
DHFR-206ENST00000513048 CDC42BPAQ5VT25 1732 aa14.27□□□□□ -0.12
DHFR-206ENST00000513048 PTPN23Q9H3S7 1636 aa14.27□□□□□ -0.12
DHFR-206ENST00000513048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.27□□□□□ -0.12
DHFR-206ENST00000513048 WDR7Q9Y4E6 1490 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms