RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 ARHGEF11O15085 1522 aa29■■■□□ 2.23
DDR1-270ENST00000513043 PRXQ9BXM0 1461 aa28.95■■■□□ 2.22
DDR1-270ENST00000513043 KIAA0586Q9BVV6 1533 aa28.87■■■□□ 2.21
DDR1-270ENST00000513043 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
DDR1-270ENST00000513043 SHROOM2Q13796 1616 aa28.83■■■□□ 2.21
DDR1-270ENST00000513043 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
DDR1-270ENST00000513043 EHMT2Q96KQ7 1210 aa28.78■■■□□ 2.2
DDR1-270ENST00000513043 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
DDR1-270ENST00000513043 CYB5RLQ6IPT4 315 aa28.77■■■□□ 2.2
DDR1-270ENST00000513043 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
DDR1-270ENST00000513043 IQGAP2Q13576 1575 aa28.76■■■□□ 2.19
DDR1-270ENST00000513043 KIF21BO75037 1637 aa28.72■■■□□ 2.19
DDR1-270ENST00000513043 CTTNBP2Q8WZ74 1663 aa28.7■■■□□ 2.19
DDR1-270ENST00000513043 GOLGA3Q08378 1498 aa28.59■■■□□ 2.17
DDR1-270ENST00000513043 UGGT2Q9NYU1 1516 aa28.59■■■□□ 2.17
DDR1-270ENST00000513043 UBTFP17480 764 aaKnown RBP28.58■■■□□ 2.17
DDR1-270ENST00000513043 CARMIL2Q6F5E8 1435 aa28.57■■■□□ 2.16
DDR1-270ENST00000513043 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
DDR1-270ENST00000513043 DISP1Q96F81 1524 aa28.54■■■□□ 2.16
DDR1-270ENST00000513043 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
DDR1-270ENST00000513043 KIAA0556O60303 1618 aa28.48■■■□□ 2.15
DDR1-270ENST00000513043 TNIKQ9UKE5 1360 aa28.47■■■□□ 2.15
DDR1-270ENST00000513043 PTPRGP23470 1445 aa28.45■■■□□ 2.15
DDR1-270ENST00000513043 P3H3Q8IVL6 736 aa28.43■■■□□ 2.14
DDR1-270ENST00000513043 SAMD9Q5K651 1589 aa28.34■■■□□ 2.13
DDR1-270ENST00000513043 TRHP20396 242 aaPredicted RBP28.34■■■□□ 2.13
DDR1-270ENST00000513043 ADCY10Q96PN6 1610 aa28.29■■■□□ 2.12
DDR1-270ENST00000513043 FHOD3Q2V2M9 1422 aa28.27■■■□□ 2.12
DDR1-270ENST00000513043 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
DDR1-270ENST00000513043 UACAQ9BZF9 1416 aa28.26■■■□□ 2.11
DDR1-270ENST00000513043 EFCAB5A4FU69 1503 aa28.25■■■□□ 2.11
DDR1-270ENST00000513043 PLB1Q6P1J6 1458 aa28.22■■■□□ 2.11
DDR1-270ENST00000513043 NPM1P06748 294 aaKnown RBP eCLIP28.2■■■□□ 2.1
DDR1-270ENST00000513043 ARHGAP35Q9NRY4 1499 aa28.2■■■□□ 2.1
DDR1-270ENST00000513043 ABCC2Q92887 1545 aa28.18■■■□□ 2.1
DDR1-270ENST00000513043 UHRF1BP1LA0JNW5 1464 aa28.17■■■□□ 2.1
DDR1-270ENST00000513043 ABCA8O94911 1581 aa28.15■■■□□ 2.1
DDR1-270ENST00000513043 CLIP1P30622 1438 aa28.11■■■□□ 2.09
DDR1-270ENST00000513043 ARID3CA6NKF2 412 aa28.09■■■□□ 2.09
DDR1-270ENST00000513043 RAPGEF6Q8TEU7 1601 aa28.05■■■□□ 2.08
DDR1-270ENST00000513043 KDM5BQ9UGL1 1544 aa28.05■■■□□ 2.08
DDR1-270ENST00000513043 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
DDR1-270ENST00000513043 ZCCHC11Q5TAX3 1644 aaKnown RBP28.03■■■□□ 2.08
DDR1-270ENST00000513043 MAPKBP1O60336 1514 aa28.02■■■□□ 2.08
DDR1-270ENST00000513043 FMN1Q68DA7 1419 aa28.01■■■□□ 2.07
DDR1-270ENST00000513043 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
DDR1-270ENST00000513043 ASXL2Q76L83 1435 aa27.98■■■□□ 2.07
DDR1-270ENST00000513043 NUP153P49790 1475 aaKnown RBP27.97■■■□□ 2.07
DDR1-270ENST00000513043 ATP10BO94823 1461 aa27.95■■■□□ 2.06
DDR1-270ENST00000513043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.93■■■□□ 2.06
DDR1-270ENST00000513043 HNRNPUL2Q1KMD3 747 aaKnown RBP27.93■■■□□ 2.06
DDR1-270ENST00000513043 ABCC10Q5T3U5 1492 aa27.89■■■□□ 2.06
DDR1-270ENST00000513043 FAM69CQ0P6D2 419 aa27.89■■■□□ 2.06
DDR1-270ENST00000513043 DIP2BQ9P265 1576 aa27.86■■■□□ 2.05
DDR1-270ENST00000513043 HECW1Q76N89 1606 aa27.86■■■□□ 2.05
DDR1-270ENST00000513043 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
DDR1-270ENST00000513043 WDR7Q9Y4E6 1490 aa27.85■■■□□ 2.05
DDR1-270ENST00000513043 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
DDR1-270ENST00000513043 CDK13Q14004 1512 aaKnown RBP27.84■■■□□ 2.05
DDR1-270ENST00000513043 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
DDR1-270ENST00000513043 CASKIN1Q8WXD9 1431 aa27.82■■■□□ 2.04
DDR1-270ENST00000513043 EPRSP07814 1512 aaKnown RBP27.8■■■□□ 2.04
DDR1-270ENST00000513043 FYCO1Q9BQS8 1478 aa27.76■■■□□ 2.03
DDR1-270ENST00000513043 LRRIQ1Q96JM4 1722 aa27.73■■■□□ 2.03
DDR1-270ENST00000513043 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
DDR1-270ENST00000513043 GLI2P10070 1586 aa27.71■■■□□ 2.03
DDR1-270ENST00000513043 CCDC18Q5T9S5 1454 aa27.67■■■□□ 2.02
DDR1-270ENST00000513043 TSPOAP1O95153 1857 aa27.67■■■□□ 2.02
DDR1-270ENST00000513043 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
DDR1-270ENST00000513043 CDK11AQ9UQ88 783 aaPredicted RBP27.65■■■□□ 2.02
DDR1-270ENST00000513043 MAP3K4Q9Y6R4 1608 aa27.62■■■□□ 2.01
DDR1-270ENST00000513043 CD109Q6YHK3 1445 aa27.58■■■□□ 2.01
DDR1-270ENST00000513043 TROQ12816 1431 aaPredicted RBP27.57■■■□□ 2
DDR1-270ENST00000513043 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
DDR1-270ENST00000513043 ABCA9Q8IUA7 1624 aa27.56■■■□□ 2
DDR1-270ENST00000513043 MAGI3Q5TCQ9 1506 aa27.55■■■□□ 2
DDR1-270ENST00000513043 PPRC1Q5VV67 1664 aaKnown RBP27.55■■■□□ 2
DDR1-270ENST00000513043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.52■■■□□ 26e-7■■■■□ 21.9
DDR1-270ENST00000513043 KIF14Q15058 1648 aa27.51■■□□□ 1.99
DDR1-270ENST00000513043 TTC37Q6PGP7 1564 aa27.5■■□□□ 1.99
DDR1-270ENST00000513043 TEX14Q8IWB6 1497 aa27.47■■□□□ 1.99
DDR1-270ENST00000513043 MTUS2Q5JR59 1369 aa27.47■■□□□ 1.99
DDR1-270ENST00000513043 TIAM1Q13009 1591 aa27.43■■□□□ 1.98
DDR1-270ENST00000513043 EHBP1L1Q8N3D4 1523 aa27.38■■□□□ 1.97
DDR1-270ENST00000513043 APLP2Q06481 763 aa27.38■■□□□ 1.97
DDR1-270ENST00000513043 KDM6BO15054 1643 aa27.38■■□□□ 1.97
DDR1-270ENST00000513043 PLCH2O75038 1416 aa27.34■■□□□ 1.97
DDR1-270ENST00000513043 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
DDR1-270ENST00000513043 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.97
DDR1-270ENST00000513043 COL17A1Q9UMD9 1497 aaPredicted RBP27.33■■□□□ 1.97
DDR1-270ENST00000513043 FANCAO15360 1455 aa27.32■■□□□ 1.96
DDR1-270ENST00000513043 LRRC9Q6ZRR7 1453 aa27.32■■□□□ 1.96
DDR1-270ENST00000513043 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
DDR1-270ENST00000513043 NEO1Q92859 1461 aa27.3■■□□□ 1.96
DDR1-270ENST00000513043 ARHGAP5Q13017 1502 aa27.28■■□□□ 1.96
DDR1-270ENST00000513043 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
DDR1-270ENST00000513043 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
DDR1-270ENST00000513043 CCNB3Q8WWL7 1395 aa27.26■■□□□ 1.95
DDR1-270ENST00000513043 EFCAB2Q5VUJ9 269 aa27.26■■□□□ 1.95
DDR1-270ENST00000513043 PREX2Q70Z35 1606 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms