RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CHD1O14646 1710 aa17.62■□□□□ 0.41
PFDN1-204ENST00000512707 SYNJ2O15056 1496 aa17.61■□□□□ 0.41
PFDN1-204ENST00000512707 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
PFDN1-204ENST00000512707 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
PFDN1-204ENST00000512707 UBTFP17480 764 aaKnown RBP17.57■□□□□ 0.4
PFDN1-204ENST00000512707 FBLN2P98095 1184 aa17.55■□□□□ 0.4
PFDN1-204ENST00000512707 GRIN2AQ12879 1464 aa17.53■□□□□ 0.4
PFDN1-204ENST00000512707 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
PFDN1-204ENST00000512707 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
PFDN1-204ENST00000512707 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
PFDN1-204ENST00000512707 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
PFDN1-204ENST00000512707 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
PFDN1-204ENST00000512707 NUP160Q12769 1436 aa17.41■□□□□ 0.38
PFDN1-204ENST00000512707 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
PFDN1-204ENST00000512707 KIAA0586Q9BVV6 1533 aa17.4■□□□□ 0.38
PFDN1-204ENST00000512707 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
PFDN1-204ENST00000512707 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
PFDN1-204ENST00000512707 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
PFDN1-204ENST00000512707 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
PFDN1-204ENST00000512707 CLIP1P30622 1438 aa17.33■□□□□ 0.36
PFDN1-204ENST00000512707 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
PFDN1-204ENST00000512707 EFCAB5A4FU69 1503 aa17.3■□□□□ 0.36
PFDN1-204ENST00000512707 UGGT2Q9NYU1 1516 aa17.28■□□□□ 0.36
PFDN1-204ENST00000512707 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
PFDN1-204ENST00000512707 CARMIL2Q6F5E8 1435 aa17.26■□□□□ 0.35
PFDN1-204ENST00000512707 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
PFDN1-204ENST00000512707 ARHGAP35Q9NRY4 1499 aa17.22■□□□□ 0.35
PFDN1-204ENST00000512707 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
PFDN1-204ENST00000512707 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
PFDN1-204ENST00000512707 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
PFDN1-204ENST00000512707 DISP1Q96F81 1524 aa17.17■□□□□ 0.34
PFDN1-204ENST00000512707 P3H3Q8IVL6 736 aa17.17■□□□□ 0.34
PFDN1-204ENST00000512707 FHOD3Q2V2M9 1422 aa17.15■□□□□ 0.34
PFDN1-204ENST00000512707 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
PFDN1-204ENST00000512707 FOXD1Q16676 465 aa17.15■□□□□ 0.34
PFDN1-204ENST00000512707 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
PFDN1-204ENST00000512707 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
PFDN1-204ENST00000512707 PTPRGP23470 1445 aa17.07■□□□□ 0.32
PFDN1-204ENST00000512707 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
PFDN1-204ENST00000512707 APLP2Q06481 763 aa17.04■□□□□ 0.32
PFDN1-204ENST00000512707 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
PFDN1-204ENST00000512707 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
PFDN1-204ENST00000512707 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
PFDN1-204ENST00000512707 PCF11O94913 1555 aaKnown RBP17.01■□□□□ 0.31
PFDN1-204ENST00000512707 HECW1Q76N89 1606 aa17■□□□□ 0.31
PFDN1-204ENST00000512707 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
PFDN1-204ENST00000512707 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
PFDN1-204ENST00000512707 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
PFDN1-204ENST00000512707 KIF13AQ9H1H9 1805 aa16.96■□□□□ 0.3
PFDN1-204ENST00000512707 ABCA8O94911 1581 aa16.95■□□□□ 0.3
PFDN1-204ENST00000512707 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
PFDN1-204ENST00000512707 ADRA2BP18089 450 aa16.93■□□□□ 0.3
PFDN1-204ENST00000512707 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
PFDN1-204ENST00000512707 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
PFDN1-204ENST00000512707 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
PFDN1-204ENST00000512707 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
PFDN1-204ENST00000512707 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
PFDN1-204ENST00000512707 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
PFDN1-204ENST00000512707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
PFDN1-204ENST00000512707 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
PFDN1-204ENST00000512707 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
PFDN1-204ENST00000512707 TIAM1Q13009 1591 aa16.88■□□□□ 0.29
PFDN1-204ENST00000512707 CFAP43Q8NDM7 1665 aa16.87■□□□□ 0.29
PFDN1-204ENST00000512707 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
PFDN1-204ENST00000512707 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
PFDN1-204ENST00000512707 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
PFDN1-204ENST00000512707 ADCY10Q96PN6 1610 aa16.83■□□□□ 0.28
PFDN1-204ENST00000512707 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
PFDN1-204ENST00000512707 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
PFDN1-204ENST00000512707 ATP10BO94823 1461 aa16.81■□□□□ 0.28
PFDN1-204ENST00000512707 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
PFDN1-204ENST00000512707 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
PFDN1-204ENST00000512707 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
PFDN1-204ENST00000512707 PLEKHD1A6NEE1 506 aa16.79■□□□□ 0.28
PFDN1-204ENST00000512707 EHBP1L1Q8N3D4 1523 aa16.79■□□□□ 0.28
PFDN1-204ENST00000512707 ABCC10Q5T3U5 1492 aa16.79■□□□□ 0.28
PFDN1-204ENST00000512707 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
PFDN1-204ENST00000512707 DIP2BQ9P265 1576 aa16.77■□□□□ 0.28
PFDN1-204ENST00000512707 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
PFDN1-204ENST00000512707 TROQ12816 1431 aaPredicted RBP16.74■□□□□ 0.27
PFDN1-204ENST00000512707 PPARGC1BQ86YN6 1023 aaKnown RBP16.74■□□□□ 0.27
PFDN1-204ENST00000512707 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
PFDN1-204ENST00000512707 FAM69CQ0P6D2 419 aa16.71■□□□□ 0.27
PFDN1-204ENST00000512707 KIF14Q15058 1648 aa16.7■□□□□ 0.26
PFDN1-204ENST00000512707 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
PFDN1-204ENST00000512707 WDR7Q9Y4E6 1490 aa16.69■□□□□ 0.26
PFDN1-204ENST00000512707 ASXL2Q76L83 1435 aa16.69■□□□□ 0.26
PFDN1-204ENST00000512707 KDM6BO15054 1643 aa16.67■□□□□ 0.26
PFDN1-204ENST00000512707 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
PFDN1-204ENST00000512707 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
PFDN1-204ENST00000512707 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
PFDN1-204ENST00000512707 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
PFDN1-204ENST00000512707 MYOM3Q5VTT5 1437 aa16.6■□□□□ 0.25
PFDN1-204ENST00000512707 ITSN2Q9NZM3 1697 aa16.59■□□□□ 0.25
PFDN1-204ENST00000512707 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
PFDN1-204ENST00000512707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.24
PFDN1-204ENST00000512707 TRIM26Q12899 539 aaPredicted RBP16.56■□□□□ 0.24
PFDN1-204ENST00000512707 MIA2Q96PC5 1412 aa16.55■□□□□ 0.24
PFDN1-204ENST00000512707 PPRC1Q5VV67 1664 aaKnown RBP16.55■□□□□ 0.24
PFDN1-204ENST00000512707 TTC37Q6PGP7 1564 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms