RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
SGCA-207ENST00000511303 FBLN2P98095 1184 aa18.83■□□□□ 0.6
SGCA-207ENST00000511303 NUP160Q12769 1436 aa18.81■□□□□ 0.6
SGCA-207ENST00000511303 CTTNBP2Q8WZ74 1663 aa18.77■□□□□ 0.6
SGCA-207ENST00000511303 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
SGCA-207ENST00000511303 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.59
SGCA-207ENST00000511303 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
SGCA-207ENST00000511303 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
SGCA-207ENST00000511303 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
SGCA-207ENST00000511303 UGGT2Q9NYU1 1516 aa18.72■□□□□ 0.59
SGCA-207ENST00000511303 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
SGCA-207ENST00000511303 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
SGCA-207ENST00000511303 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
SGCA-207ENST00000511303 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
SGCA-207ENST00000511303 FMN1Q68DA7 1419 aa18.65■□□□□ 0.58
SGCA-207ENST00000511303 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.57
SGCA-207ENST00000511303 APLP2Q06481 763 aa18.63■□□□□ 0.57
SGCA-207ENST00000511303 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
SGCA-207ENST00000511303 CHD1O14646 1710 aa18.6■□□□□ 0.57
SGCA-207ENST00000511303 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
SGCA-207ENST00000511303 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
SGCA-207ENST00000511303 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
SGCA-207ENST00000511303 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
SGCA-207ENST00000511303 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
SGCA-207ENST00000511303 CLASP1Q7Z460 1538 aa18.53■□□□□ 0.56
SGCA-207ENST00000511303 KIAA0556O60303 1618 aa18.52■□□□□ 0.56
SGCA-207ENST00000511303 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
SGCA-207ENST00000511303 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.55
SGCA-207ENST00000511303 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
SGCA-207ENST00000511303 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
SGCA-207ENST00000511303 PTPRGP23470 1445 aa18.44■□□□□ 0.54
SGCA-207ENST00000511303 ATP1B4Q9UN42 357 aaPredicted RBP18.43■□□□□ 0.54
SGCA-207ENST00000511303 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
SGCA-207ENST00000511303 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.54
SGCA-207ENST00000511303 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
SGCA-207ENST00000511303 TIAM1Q13009 1591 aa18.37■□□□□ 0.53
SGCA-207ENST00000511303 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
SGCA-207ENST00000511303 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
SGCA-207ENST00000511303 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
SGCA-207ENST00000511303 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
SGCA-207ENST00000511303 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.53
SGCA-207ENST00000511303 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
SGCA-207ENST00000511303 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
SGCA-207ENST00000511303 RAPGEF6Q8TEU7 1601 aa18.32■□□□□ 0.52
SGCA-207ENST00000511303 ABCA8O94911 1581 aa18.32■□□□□ 0.52
SGCA-207ENST00000511303 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
SGCA-207ENST00000511303 NUP153P49790 1475 aaKnown RBP18.31■□□□□ 0.52
SGCA-207ENST00000511303 MTUS2Q5JR59 1369 aa18.29■□□□□ 0.52
SGCA-207ENST00000511303 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
SGCA-207ENST00000511303 UHRF1BP1LA0JNW5 1464 aa18.27■□□□□ 0.52
SGCA-207ENST00000511303 ERCC6L2Q5T890 1561 aa18.27■□□□□ 0.52
SGCA-207ENST00000511303 PCGF6Q9BYE7 350 aa18.25■□□□□ 0.51
SGCA-207ENST00000511303 ATP10BO94823 1461 aa18.23■□□□□ 0.51
SGCA-207ENST00000511303 PLEKHD1A6NEE1 506 aa18.23■□□□□ 0.51
SGCA-207ENST00000511303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
SGCA-207ENST00000511303 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
SGCA-207ENST00000511303 ABCC2Q92887 1545 aa18.22■□□□□ 0.51
SGCA-207ENST00000511303 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
SGCA-207ENST00000511303 CDK13Q14004 1512 aaKnown RBP18.19■□□□□ 0.5
SGCA-207ENST00000511303 TROQ12816 1431 aaPredicted RBP18.18■□□□□ 0.5
SGCA-207ENST00000511303 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
SGCA-207ENST00000511303 RRBP1Q9P2E9 1410 aaKnown RBP18.16■□□□□ 0.5
SGCA-207ENST00000511303 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
SGCA-207ENST00000511303 ARID3CA6NKF2 412 aa18.15■□□□□ 0.5
SGCA-207ENST00000511303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
SGCA-207ENST00000511303 NCOA2Q15596 1464 aa18.14■□□□□ 0.49
SGCA-207ENST00000511303 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
SGCA-207ENST00000511303 PHLDB1Q86UU1 1377 aa18.13■□□□□ 0.49
SGCA-207ENST00000511303 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
SGCA-207ENST00000511303 MAGI3Q5TCQ9 1506 aa18.13■□□□□ 0.49
SGCA-207ENST00000511303 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
SGCA-207ENST00000511303 SUPT6HQ7KZ85 1726 aaKnown RBP18.11■□□□□ 0.49
SGCA-207ENST00000511303 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
SGCA-207ENST00000511303 MIA2Q96PC5 1412 aa18.07■□□□□ 0.48
SGCA-207ENST00000511303 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
SGCA-207ENST00000511303 ADCY10Q96PN6 1610 aa18.04■□□□□ 0.48
SGCA-207ENST00000511303 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
SGCA-207ENST00000511303 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
SGCA-207ENST00000511303 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
SGCA-207ENST00000511303 ZCCHC11Q5TAX3 1644 aaKnown RBP18■□□□□ 0.47
SGCA-207ENST00000511303 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
SGCA-207ENST00000511303 ABCC10Q5T3U5 1492 aa18■□□□□ 0.47
SGCA-207ENST00000511303 KIF14Q15058 1648 aa17.99■□□□□ 0.47
SGCA-207ENST00000511303 FAM50AQ14320 339 aaKnown RBP17.99■□□□□ 0.47
SGCA-207ENST00000511303 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
SGCA-207ENST00000511303 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
SGCA-207ENST00000511303 TCOF1Q13428 1488 aaKnown RBP17.97■□□□□ 0.47
SGCA-207ENST00000511303 WDR7Q9Y4E6 1490 aa17.96■□□□□ 0.47
SGCA-207ENST00000511303 KCNH8Q96L42 1107 aa17.94■□□□□ 0.46
SGCA-207ENST00000511303 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
SGCA-207ENST00000511303 RSPH4AQ5TD94 716 aa17.91■□□□□ 0.46
SGCA-207ENST00000511303 PTPN23Q9H3S7 1636 aa17.9■□□□□ 0.46
SGCA-207ENST00000511303 PLCH2O75038 1416 aa17.89■□□□□ 0.46
SGCA-207ENST00000511303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.89■□□□□ 0.45
SGCA-207ENST00000511303 HRCP23327 699 aa17.89■□□□□ 0.45
SGCA-207ENST00000511303 ITSN2Q9NZM3 1697 aa17.89■□□□□ 0.45
SGCA-207ENST00000511303 EFCAB2Q5VUJ9 269 aa17.88■□□□□ 0.45
SGCA-207ENST00000511303 MAPKBP1O60336 1514 aa17.87■□□□□ 0.45
SGCA-207ENST00000511303 ARAP3Q8WWN8 1544 aa17.86■□□□□ 0.45
SGCA-207ENST00000511303 ITGAEP38570 1179 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms