RNA–Protein interactions for RNA: ENST00000510806.1

SH3RF1-204, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 591 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-204ENST00000510806 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
SH3RF1-204ENST00000510806 GABBR2O75899 941 aa12.05□□□□□ -0.48
SH3RF1-204ENST00000510806 CUX2O14529 1486 aa12.02□□□□□ -0.49
SH3RF1-204ENST00000510806 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
SH3RF1-204ENST00000510806 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
SH3RF1-204ENST00000510806 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
SH3RF1-204ENST00000510806 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
SH3RF1-204ENST00000510806 ERCC6Q03468 1493 aa11.97□□□□□ -0.49
SH3RF1-204ENST00000510806 NESP48681 1621 aa11.97□□□□□ -0.49
SH3RF1-204ENST00000510806 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
SH3RF1-204ENST00000510806 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
SH3RF1-204ENST00000510806 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
SH3RF1-204ENST00000510806 PROM2Q8N271 834 aa11.86□□□□□ -0.51
SH3RF1-204ENST00000510806 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
SH3RF1-204ENST00000510806 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
SH3RF1-204ENST00000510806 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
SH3RF1-204ENST00000510806 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
SH3RF1-204ENST00000510806 PDS5BQ9NTI5 1447 aa11.83□□□□□ -0.52
SH3RF1-204ENST00000510806 WIZO95785 1651 aa11.81□□□□□ -0.52
SH3RF1-204ENST00000510806 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
SH3RF1-204ENST00000510806 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
SH3RF1-204ENST00000510806 RSF1Q96T23 1441 aaPredicted RBP11.77□□□□□ -0.53
SH3RF1-204ENST00000510806 CLCN6P51797 869 aa11.74□□□□□ -0.53
SH3RF1-204ENST00000510806 LHX8Q68G74 356 aa11.74□□□□□ -0.53
SH3RF1-204ENST00000510806 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
SH3RF1-204ENST00000510806 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
SH3RF1-204ENST00000510806 CFTRP13569 1480 aa11.7□□□□□ -0.54
SH3RF1-204ENST00000510806 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
SH3RF1-204ENST00000510806 WDR62O43379 1518 aa11.7□□□□□ -0.54
SH3RF1-204ENST00000510806 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
SH3RF1-204ENST00000510806 FANCD2Q9BXW9 1451 aa11.66□□□□□ -0.54
SH3RF1-204ENST00000510806 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
SH3RF1-204ENST00000510806 CEP164Q9UPV0 1460 aa11.65□□□□□ -0.54
SH3RF1-204ENST00000510806 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
SH3RF1-204ENST00000510806 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
SH3RF1-204ENST00000510806 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
SH3RF1-204ENST00000510806 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
SH3RF1-204ENST00000510806 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
SH3RF1-204ENST00000510806 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
SH3RF1-204ENST00000510806 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
SH3RF1-204ENST00000510806 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
SH3RF1-204ENST00000510806 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
SH3RF1-204ENST00000510806 POTEB2H3BUK9 544 aa11.49□□□□□ -0.57
SH3RF1-204ENST00000510806 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
SH3RF1-204ENST00000510806 MIER1Q8N108 512 aa11.47□□□□□ -0.57
SH3RF1-204ENST00000510806 FKBP8Q14318 412 aa11.46□□□□□ -0.57
SH3RF1-204ENST00000510806 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
SH3RF1-204ENST00000510806 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
SH3RF1-204ENST00000510806 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-204ENST00000510806 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
SH3RF1-204ENST00000510806 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-204ENST00000510806 KIF12Q96FN5 646 aa11.43□□□□□ -0.58
SH3RF1-204ENST00000510806 ZNF608Q9ULD9 1512 aaPredicted RBP11.42□□□□□ -0.58
SH3RF1-204ENST00000510806 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
SH3RF1-204ENST00000510806 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
SH3RF1-204ENST00000510806 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
SH3RF1-204ENST00000510806 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
SH3RF1-204ENST00000510806 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
SH3RF1-204ENST00000510806 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
SH3RF1-204ENST00000510806 MAP3K13O43283 966 aa11.36□□□□□ -0.59
SH3RF1-204ENST00000510806 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
SH3RF1-204ENST00000510806 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
SH3RF1-204ENST00000510806 NUBP1P53384 320 aa11.35□□□□□ -0.59
SH3RF1-204ENST00000510806 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-204ENST00000510806 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
SH3RF1-204ENST00000510806 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
SH3RF1-204ENST00000510806 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
SH3RF1-204ENST00000510806 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.6
SH3RF1-204ENST00000510806 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
SH3RF1-204ENST00000510806 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
SH3RF1-204ENST00000510806 C7P10643 843 aa11.3□□□□□ -0.6
SH3RF1-204ENST00000510806 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
SH3RF1-204ENST00000510806 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
SH3RF1-204ENST00000510806 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
SH3RF1-204ENST00000510806 SOGA1O94964 1423 aa11.28□□□□□ -0.6
SH3RF1-204ENST00000510806 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
SH3RF1-204ENST00000510806 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
SH3RF1-204ENST00000510806 ARHGEF11O15085 1522 aa11.27□□□□□ -0.61
SH3RF1-204ENST00000510806 TIE1P35590 1138 aa11.26□□□□□ -0.61
SH3RF1-204ENST00000510806 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-204ENST00000510806 CUX1P39880 1505 aa11.25□□□□□ -0.61
SH3RF1-204ENST00000510806 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
SH3RF1-204ENST00000510806 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
SH3RF1-204ENST00000510806 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
SH3RF1-204ENST00000510806 TTLL13PA6NNM8 815 aa11.23□□□□□ -0.61
SH3RF1-204ENST00000510806 CHD1O14646 1710 aa11.23□□□□□ -0.61
SH3RF1-204ENST00000510806 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
SH3RF1-204ENST00000510806 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
SH3RF1-204ENST00000510806 CYB5RLQ6IPT4 315 aa11.19□□□□□ -0.62
SH3RF1-204ENST00000510806 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
SH3RF1-204ENST00000510806 MAGI1Q96QZ7 1491 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-204ENST00000510806 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
SH3RF1-204ENST00000510806 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
SH3RF1-204ENST00000510806 SNAPC4Q5SXM2 1469 aa11.18□□□□□ -0.62
SH3RF1-204ENST00000510806 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
SH3RF1-204ENST00000510806 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
SH3RF1-204ENST00000510806 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
SH3RF1-204ENST00000510806 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
SH3RF1-204ENST00000510806 CLASP1Q7Z460 1538 aa11.15□□□□□ -0.62
SH3RF1-204ENST00000510806 ABCA10Q8WWZ4 1543 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms