RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	UBTF	P17480	764 aa	Known RBP	19.45	■□□□□ 0.7
RACK1-223	ENST00000510199	TNIK	Q9UKE5	1360 aa		19.41	■□□□□ 0.7
RACK1-223	ENST00000510199	KIAA0586	Q9BVV6	1533 aa		19.41	■□□□□ 0.7
RACK1-223	ENST00000510199	IQGAP2	Q13576	1575 aa		19.4	■□□□□ 0.7
RACK1-223	ENST00000510199	CLASP1	Q7Z460	1538 aa		19.38	■□□□□ 0.69
RACK1-223	ENST00000510199	OSCAR	Q8IYS5	282 aa		19.36	■□□□□ 0.69
RACK1-223	ENST00000510199	SHROOM2	Q13796	1616 aa		19.33	■□□□□ 0.68
RACK1-223	ENST00000510199	UGGT2	Q9NYU1	1516 aa		19.3	■□□□□ 0.68
RACK1-223	ENST00000510199	SAMD9	Q5K651	1589 aa		19.26	■□□□□ 0.67
RACK1-223	ENST00000510199	JPH4	Q96JJ6	628 aa		19.25	■□□□□ 0.67
RACK1-223	ENST00000510199	EFCAB5	A4FU69	1503 aa		19.25	■□□□□ 0.67
RACK1-223	ENST00000510199	CEP162	Q5TB80	1403 aa		19.25	■□□□□ 0.67
RACK1-223	ENST00000510199	CLIP1	P30622	1438 aa		19.22	■□□□□ 0.67
RACK1-223	ENST00000510199	KIAA0556	O60303	1618 aa		19.21	■□□□□ 0.67
RACK1-223	ENST00000510199	RANGAP1	P46060	587 aa	Predicted RBP	19.2	■□□□□ 0.66
RACK1-223	ENST00000510199	DISP1	Q96F81	1524 aa		19.2	■□□□□ 0.66
RACK1-223	ENST00000510199	ARHGAP35	Q9NRY4	1499 aa		19.19	■□□□□ 0.66
RACK1-223	ENST00000510199	CARMIL2	Q6F5E8	1435 aa		19.17	■□□□□ 0.66
RACK1-223	ENST00000510199	PRG4	Q92954	1404 aa	Predicted RBP	19.17	■□□□□ 0.66
RACK1-223	ENST00000510199	ERCC6L2	Q5T890	1561 aa		19.14	■□□□□ 0.65
RACK1-223	ENST00000510199	ARAP1	Q96P48	1450 aa		19.1	■□□□□ 0.65
RACK1-223	ENST00000510199	FHOD3	Q2V2M9	1422 aa		19.09	■□□□□ 0.65
RACK1-223	ENST00000510199	P3H3	Q8IVL6	736 aa		19.09	■□□□□ 0.65
RACK1-223	ENST00000510199	ARHGEF11	O15085	1522 aa		19.07	■□□□□ 0.64
RACK1-223	ENST00000510199	RIMBP3C	A6NJZ7	1639 aa		19.07	■□□□□ 0.64
RACK1-223	ENST00000510199	RIMBP3B	A6NNM3	1639 aa		19.07	■□□□□ 0.64
RACK1-223	ENST00000510199	RIMBP3	Q9UFD9	1639 aa		19.07	■□□□□ 0.64
RACK1-223	ENST00000510199	FMN1	Q68DA7	1419 aa		19.03	■□□□□ 0.64
RACK1-223	ENST00000510199	PTPRG	P23470	1445 aa		19	■□□□□ 0.63
RACK1-223	ENST00000510199	VPS8	Q8N3P4	1428 aa		19	■□□□□ 0.63
RACK1-223	ENST00000510199	RAPGEF6	Q8TEU7	1601 aa		18.98	■□□□□ 0.63
RACK1-223	ENST00000510199	PCF11	O94913	1555 aa	Known RBP	18.97	■□□□□ 0.63
RACK1-223	ENST00000510199	ABCA8	O94911	1581 aa		18.96	■□□□□ 0.63
RACK1-223	ENST00000510199	TTBK1	Q5TCY1	1321 aa	Predicted RBP	18.96	■□□□□ 0.63
RACK1-223	ENST00000510199	HECW1	Q76N89	1606 aa		18.93	■□□□□ 0.62
RACK1-223	ENST00000510199	CASKIN1	Q8WXD9	1431 aa		18.93	■□□□□ 0.62
RACK1-223	ENST00000510199	LRRIQ1	Q96JM4	1722 aa		18.93	■□□□□ 0.62
RACK1-223	ENST00000510199	PLB1	Q6P1J6	1458 aa		18.92	■□□□□ 0.62
RACK1-223	ENST00000510199	FYCO1	Q9BQS8	1478 aa		18.92	■□□□□ 0.62
RACK1-223	ENST00000510199	UACA	Q9BZF9	1416 aa		18.91	■□□□□ 0.62
RACK1-223	ENST00000510199	DNAJC5	Q9H3Z4	198 aa		18.9	■□□□□ 0.62
RACK1-223	ENST00000510199	ABCC2	Q92887	1545 aa		18.9	■□□□□ 0.62
RACK1-223	ENST00000510199	UHRF1BP1L	A0JNW5	1464 aa		18.89	■□□□□ 0.61
RACK1-223	ENST00000510199	ADCY10	Q96PN6	1610 aa		18.88	■□□□□ 0.61
RACK1-223	ENST00000510199	NUP153	P49790	1475 aa	Known RBP	18.85	■□□□□ 0.61
RACK1-223	ENST00000510199	CFAP43	Q8NDM7	1665 aa		18.84	■□□□□ 0.61
RACK1-223	ENST00000510199	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.83	■□□□□ 0.6
RACK1-223	ENST00000510199	CCDC18	Q5T9S5	1454 aa		18.83	■□□□□ 0.6
RACK1-223	ENST00000510199	CYB5RL	Q6IPT4	315 aa		18.82	■□□□□ 0.6
RACK1-223	ENST00000510199	EPRS	P07814	1512 aa	Known RBP	18.82	■□□□□ 0.6
RACK1-223	ENST00000510199	ZCCHC11	Q5TAX3	1644 aa	Known RBP	18.81	■□□□□ 0.6
RACK1-223	ENST00000510199	MAP3K1	Q13233	1512 aa		18.8	■□□□□ 0.6
RACK1-223	ENST00000510199	TIAM1	Q13009	1591 aa		18.8	■□□□□ 0.6
RACK1-223	ENST00000510199	KDM5B	Q9UGL1	1544 aa		18.79	■□□□□ 0.6
RACK1-223	ENST00000510199	CDK13	Q14004	1512 aa	Known RBP	18.78	■□□□□ 0.6
RACK1-223	ENST00000510199	ATP10B	O94823	1461 aa		18.77	■□□□□ 0.6
RACK1-223	ENST00000510199	APLP2	Q06481	763 aa		18.76	■□□□□ 0.59
RACK1-223	ENST00000510199	ARID3C	A6NKF2	412 aa		18.72	■□□□□ 0.59
RACK1-223	ENST00000510199	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	18.7	■□□□□ 0.58
RACK1-223	ENST00000510199	NPM1	P06748	294 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
RACK1-223	ENST00000510199	HNRNPUL2	Q1KMD3	747 aa	Known RBP	18.7	■□□□□ 0.58
RACK1-223	ENST00000510199	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.69	■□□□□ 0.58
RACK1-223	ENST00000510199	LRRC9	Q6ZRR7	1453 aa		18.68	■□□□□ 0.58
RACK1-223	ENST00000510199	MAGI3	Q5TCQ9	1506 aa		18.68	■□□□□ 0.58
RACK1-223	ENST00000510199	EHBP1L1	Q8N3D4	1523 aa		18.67	■□□□□ 0.58
RACK1-223	ENST00000510199	MAPKBP1	O60336	1514 aa		18.65	■□□□□ 0.58
RACK1-223	ENST00000510199	PLEKHD1	A6NEE1	506 aa		18.65	■□□□□ 0.58
RACK1-223	ENST00000510199	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.64	■□□□□ 0.57
RACK1-223	ENST00000510199	MTUS2	Q5JR59	1369 aa		18.64	■□□□□ 0.57
RACK1-223	ENST00000510199	KANK4	Q5T7N3	995 aa	Predicted RBP	18.63	■□□□□ 0.57
RACK1-223	ENST00000510199	TRO	Q12816	1431 aa	Predicted RBP	18.63	■□□□□ 0.57
RACK1-223	ENST00000510199	ASXL2	Q76L83	1435 aa		18.62	■□□□□ 0.57
RACK1-223	ENST00000510199	WDR7	Q9Y4E6	1490 aa		18.61	■□□□□ 0.57
RACK1-223	ENST00000510199	KIF14	Q15058	1648 aa		18.6	■□□□□ 0.57
RACK1-223	ENST00000510199	PPARGC1B	Q86YN6	1023 aa	Known RBP	18.55	■□□□□ 0.56
RACK1-223	ENST00000510199	NCOA2	Q15596	1464 aa		18.53	■□□□□ 0.56
RACK1-223	ENST00000510199	CDC42BPA	Q5VT25	1732 aa		18.53	■□□□□ 0.56
RACK1-223	ENST00000510199	KIF13A	Q9H1H9	1805 aa		18.53	■□□□□ 0.56
RACK1-223	ENST00000510199	ABCA9	Q8IUA7	1624 aa		18.52	■□□□□ 0.56
RACK1-223	ENST00000510199	MYO5C	Q9NQX4	1742 aa		18.52	■□□□□ 0.56
RACK1-223	ENST00000510199	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	18.52	■□□□□ 0.56	1e-34	■■□□□ 13
RACK1-223	ENST00000510199	ITSN2	Q9NZM3	1697 aa		18.51	■□□□□ 0.55
RACK1-223	ENST00000510199	KCNH8	Q96L42	1107 aa		18.51	■□□□□ 0.55
RACK1-223	ENST00000510199	ABCC10	Q5T3U5	1492 aa		18.51	■□□□□ 0.55
RACK1-223	ENST00000510199	TTC37	Q6PGP7	1564 aa		18.51	■□□□□ 0.55
RACK1-223	ENST00000510199	DIP2B	Q9P265	1576 aa		18.51	■□□□□ 0.55
RACK1-223	ENST00000510199	GLI2	P10070	1586 aa		18.5	■□□□□ 0.55
RACK1-223	ENST00000510199	CDC42BPB	Q9Y5S2	1711 aa		18.48	■□□□□ 0.55
RACK1-223	ENST00000510199	PREX2	Q70Z35	1606 aa		18.47	■□□□□ 0.55
RACK1-223	ENST00000510199	MAP3K4	Q9Y6R4	1608 aa		18.46	■□□□□ 0.55
RACK1-223	ENST00000510199	PHLDB1	Q86UU1	1377 aa		18.44	■□□□□ 0.54
RACK1-223	ENST00000510199	CCNB3	Q8WWL7	1395 aa		18.44	■□□□□ 0.54
RACK1-223	ENST00000510199	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.44	■□□□□ 0.54
RACK1-223	ENST00000510199	MYOM3	Q5VTT5	1437 aa		18.43	■□□□□ 0.54
RACK1-223	ENST00000510199	TSPOAP1	O95153	1857 aa		18.41	■□□□□ 0.54
RACK1-223	ENST00000510199	ARAP3	Q8WWN8	1544 aa		18.41	■□□□□ 0.54
RACK1-223	ENST00000510199	PLCH2	O75038	1416 aa		18.39	■□□□□ 0.53
RACK1-223	ENST00000510199	MIA2	Q96PC5	1412 aa		18.39	■□□□□ 0.53
RACK1-223	ENST00000510199	FAM69C	Q0P6D2	419 aa		18.38	■□□□□ 0.53
RACK1-223	ENST00000510199	CD109	Q6YHK3	1445 aa		18.38	■□□□□ 0.53

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