RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
CYSTM1-204ENST00000509789 KIF21BO75037 1637 aa22.55■■□□□ 1.2
CYSTM1-204ENST00000509789 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
CYSTM1-204ENST00000509789 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
CYSTM1-204ENST00000509789 ADRA2BP18089 450 aa22.52■■□□□ 1.2
CYSTM1-204ENST00000509789 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
CYSTM1-204ENST00000509789 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
CYSTM1-204ENST00000509789 CHD1O14646 1710 aa22.43■■□□□ 1.18
CYSTM1-204ENST00000509789 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
CYSTM1-204ENST00000509789 NUP160Q12769 1436 aa22.38■■□□□ 1.17
CYSTM1-204ENST00000509789 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
CYSTM1-204ENST00000509789 KIAA0586Q9BVV6 1533 aa22.34■■□□□ 1.17
CYSTM1-204ENST00000509789 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
CYSTM1-204ENST00000509789 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
CYSTM1-204ENST00000509789 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
CYSTM1-204ENST00000509789 JPH4Q96JJ6 628 aa22.25■■□□□ 1.15
CYSTM1-204ENST00000509789 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
CYSTM1-204ENST00000509789 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
CYSTM1-204ENST00000509789 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
CYSTM1-204ENST00000509789 CLIP1P30622 1438 aa22.15■■□□□ 1.14
CYSTM1-204ENST00000509789 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
CYSTM1-204ENST00000509789 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
CYSTM1-204ENST00000509789 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
CYSTM1-204ENST00000509789 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
CYSTM1-204ENST00000509789 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
CYSTM1-204ENST00000509789 EFCAB5A4FU69 1503 aa22.07■■□□□ 1.12
CYSTM1-204ENST00000509789 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
CYSTM1-204ENST00000509789 DISP1Q96F81 1524 aa22.06■■□□□ 1.12
CYSTM1-204ENST00000509789 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
CYSTM1-204ENST00000509789 KIAA0556O60303 1618 aa22.01■■□□□ 1.11
CYSTM1-204ENST00000509789 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
CYSTM1-204ENST00000509789 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
CYSTM1-204ENST00000509789 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
CYSTM1-204ENST00000509789 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
CYSTM1-204ENST00000509789 PTPRGP23470 1445 aa21.95■■□□□ 1.1
CYSTM1-204ENST00000509789 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
CYSTM1-204ENST00000509789 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
CYSTM1-204ENST00000509789 DNAJC5Q9H3Z4 198 aa21.86■■□□□ 1.09
CYSTM1-204ENST00000509789 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
CYSTM1-204ENST00000509789 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
CYSTM1-204ENST00000509789 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
CYSTM1-204ENST00000509789 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
CYSTM1-204ENST00000509789 ATP1B4Q9UN42 357 aaPredicted RBP21.83■■□□□ 1.09
CYSTM1-204ENST00000509789 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
CYSTM1-204ENST00000509789 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
CYSTM1-204ENST00000509789 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
CYSTM1-204ENST00000509789 PLB1Q6P1J6 1458 aa21.78■■□□□ 1.08
CYSTM1-204ENST00000509789 ABCA8O94911 1581 aa21.74■■□□□ 1.07
CYSTM1-204ENST00000509789 APLP2Q06481 763 aa21.74■■□□□ 1.07
CYSTM1-204ENST00000509789 FYCO1Q9BQS8 1478 aa21.74■■□□□ 1.07
CYSTM1-204ENST00000509789 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
CYSTM1-204ENST00000509789 PCF11O94913 1555 aaKnown RBP21.72■■□□□ 1.07
CYSTM1-204ENST00000509789 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
CYSTM1-204ENST00000509789 ABCC2Q92887 1545 aa21.7■■□□□ 1.06
CYSTM1-204ENST00000509789 HECW1Q76N89 1606 aa21.69■■□□□ 1.06
CYSTM1-204ENST00000509789 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
CYSTM1-204ENST00000509789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
CYSTM1-204ENST00000509789 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
CYSTM1-204ENST00000509789 NUP153P49790 1475 aaKnown RBP21.68■■□□□ 1.06
CYSTM1-204ENST00000509789 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
CYSTM1-204ENST00000509789 EPRSP07814 1512 aaKnown RBP21.64■■□□□ 1.05
CYSTM1-204ENST00000509789 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.05
CYSTM1-204ENST00000509789 ADCY10Q96PN6 1610 aa21.63■■□□□ 1.05
CYSTM1-204ENST00000509789 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
CYSTM1-204ENST00000509789 ATP10BO94823 1461 aa21.62■■□□□ 1.05
CYSTM1-204ENST00000509789 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
CYSTM1-204ENST00000509789 MAP3K1Q13233 1512 aa21.59■■□□□ 1.05
CYSTM1-204ENST00000509789 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.04
CYSTM1-204ENST00000509789 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
CYSTM1-204ENST00000509789 TIAM1Q13009 1591 aa21.54■■□□□ 1.04
CYSTM1-204ENST00000509789 LRRIQ1Q96JM4 1722 aa21.53■■□□□ 1.04
CYSTM1-204ENST00000509789 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.04
CYSTM1-204ENST00000509789 ZCCHC11Q5TAX3 1644 aaKnown RBP21.52■■□□□ 1.04
CYSTM1-204ENST00000509789 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
CYSTM1-204ENST00000509789 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
CYSTM1-204ENST00000509789 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
CYSTM1-204ENST00000509789 LRRC9Q6ZRR7 1453 aa21.48■■□□□ 1.03
CYSTM1-204ENST00000509789 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
CYSTM1-204ENST00000509789 ASXL2Q76L83 1435 aa21.46■■□□□ 1.03
CYSTM1-204ENST00000509789 KCNH8Q96L42 1107 aa21.44■■□□□ 1.02
CYSTM1-204ENST00000509789 MAGI3Q5TCQ9 1506 aa21.42■■□□□ 1.02
CYSTM1-204ENST00000509789 EHBP1L1Q8N3D4 1523 aa21.42■■□□□ 1.02
CYSTM1-204ENST00000509789 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
CYSTM1-204ENST00000509789 MAPKBP1O60336 1514 aa21.4■■□□□ 1.02
CYSTM1-204ENST00000509789 NCOA2Q15596 1464 aa21.32■■□□□ 1
CYSTM1-204ENST00000509789 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
CYSTM1-204ENST00000509789 KIF14Q15058 1648 aa21.32■■□□□ 1
CYSTM1-204ENST00000509789 CCNB3Q8WWL7 1395 aa21.3■■□□□ 1
CYSTM1-204ENST00000509789 FAM69CQ0P6D2 419 aa21.28■■□□□ 1
CYSTM1-204ENST00000509789 ABCC10Q5T3U5 1492 aa21.26■□□□□ 0.99
CYSTM1-204ENST00000509789 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
CYSTM1-204ENST00000509789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.25■□□□□ 0.99
CYSTM1-204ENST00000509789 MYOM3Q5VTT5 1437 aa21.22■□□□□ 0.99
CYSTM1-204ENST00000509789 CFDP1Q9UEE9 299 aaPredicted RBP21.22■□□□□ 0.99
CYSTM1-204ENST00000509789 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
CYSTM1-204ENST00000509789 GLI2P10070 1586 aa21.21■□□□□ 0.99
CYSTM1-204ENST00000509789 TTC37Q6PGP7 1564 aa21.2■□□□□ 0.98
CYSTM1-204ENST00000509789 ABCA9Q8IUA7 1624 aa21.2■□□□□ 0.98
CYSTM1-204ENST00000509789 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
CYSTM1-204ENST00000509789 DIP2BQ9P265 1576 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms