RNA–Protein interactions for RNA: ENST00000509518.1

CHRNA9-203, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

TSL 3

Gene CHRNA9, Length 465 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-203ENST00000509518 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
CHRNA9-203ENST00000509518 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
CHRNA9-203ENST00000509518 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
CHRNA9-203ENST00000509518 ARHGAP35Q9NRY4 1499 aa13.41□□□□□ -0.26
CHRNA9-203ENST00000509518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHRNA9-203ENST00000509518 ANP32CO43423 234 aa13.38□□□□□ -0.27
CHRNA9-203ENST00000509518 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
CHRNA9-203ENST00000509518 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
CHRNA9-203ENST00000509518 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
CHRNA9-203ENST00000509518 EFCAB5A4FU69 1503 aa13.34□□□□□ -0.27
CHRNA9-203ENST00000509518 CUX1P39880 1505 aa13.34□□□□□ -0.27
CHRNA9-203ENST00000509518 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
CHRNA9-203ENST00000509518 BCANQ96GW7 911 aa13.31□□□□□ -0.28
CHRNA9-203ENST00000509518 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
CHRNA9-203ENST00000509518 AQRO60306 1485 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHRNA9-203ENST00000509518 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
CHRNA9-203ENST00000509518 KANK4Q5T7N3 995 aaPredicted RBP13.3□□□□□ -0.28
CHRNA9-203ENST00000509518 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
CHRNA9-203ENST00000509518 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
CHRNA9-203ENST00000509518 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
CHRNA9-203ENST00000509518 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
CHRNA9-203ENST00000509518 DDX10Q13206 875 aaKnown RBP13.25□□□□□ -0.29
CHRNA9-203ENST00000509518 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
CHRNA9-203ENST00000509518 TONSLQ96HA7 1378 aa13.23□□□□□ -0.29
CHRNA9-203ENST00000509518 GCC2Q8IWJ2 1684 aa13.23□□□□□ -0.29
CHRNA9-203ENST00000509518 CUL7Q14999 1698 aa13.22□□□□□ -0.29
CHRNA9-203ENST00000509518 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
CHRNA9-203ENST00000509518 NCOA2Q15596 1464 aa13.22□□□□□ -0.29
CHRNA9-203ENST00000509518 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
CHRNA9-203ENST00000509518 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
CHRNA9-203ENST00000509518 CCDC18Q5T9S5 1454 aa13.21□□□□□ -0.3
CHRNA9-203ENST00000509518 UACAQ9BZF9 1416 aa13.21□□□□□ -0.3
CHRNA9-203ENST00000509518 KCNH8Q96L42 1107 aa13.2□□□□□ -0.3
CHRNA9-203ENST00000509518 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
CHRNA9-203ENST00000509518 CFTRP13569 1480 aa13.2□□□□□ -0.3
CHRNA9-203ENST00000509518 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
CHRNA9-203ENST00000509518 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
CHRNA9-203ENST00000509518 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
CHRNA9-203ENST00000509518 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
CHRNA9-203ENST00000509518 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
CHRNA9-203ENST00000509518 MSH5O43196 834 aa13.16□□□□□ -0.3
CHRNA9-203ENST00000509518 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
CHRNA9-203ENST00000509518 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
CHRNA9-203ENST00000509518 CNTLNQ9NXG0 1405 aa13.14□□□□□ -0.31
CHRNA9-203ENST00000509518 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
CHRNA9-203ENST00000509518 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
CHRNA9-203ENST00000509518 TRIM52Q96A61 297 aa13.13□□□□□ -0.31
CHRNA9-203ENST00000509518 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
CHRNA9-203ENST00000509518 ITGAEP38570 1179 aa13.12□□□□□ -0.31
CHRNA9-203ENST00000509518 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
CHRNA9-203ENST00000509518 HNRNPUQ00839 825 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHRNA9-203ENST00000509518 KDM5BQ9UGL1 1544 aa13.09□□□□□ -0.31
CHRNA9-203ENST00000509518 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
CHRNA9-203ENST00000509518 DEKP35659 375 aaKnown RBP13.08□□□□□ -0.32
CHRNA9-203ENST00000509518 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
CHRNA9-203ENST00000509518 ZBED9Q6R2W3 1325 aa13.08□□□□□ -0.32
CHRNA9-203ENST00000509518 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
CHRNA9-203ENST00000509518 IGF1RP08069 1367 aa13.07□□□□□ -0.32
CHRNA9-203ENST00000509518 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
CHRNA9-203ENST00000509518 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
CHRNA9-203ENST00000509518 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
CHRNA9-203ENST00000509518 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
CHRNA9-203ENST00000509518 MYOM3Q5VTT5 1437 aa13.03□□□□□ -0.32
CHRNA9-203ENST00000509518 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
CHRNA9-203ENST00000509518 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.33
CHRNA9-203ENST00000509518 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
CHRNA9-203ENST00000509518 NAIPQ13075 1403 aa13.01□□□□□ -0.33
CHRNA9-203ENST00000509518 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
CHRNA9-203ENST00000509518 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
CHRNA9-203ENST00000509518 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
CHRNA9-203ENST00000509518 LRRIQ1Q96JM4 1722 aa12.99□□□□□ -0.33
CHRNA9-203ENST00000509518 UGGT2Q9NYU1 1516 aa12.99□□□□□ -0.33
CHRNA9-203ENST00000509518 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
CHRNA9-203ENST00000509518 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
CHRNA9-203ENST00000509518 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
CHRNA9-203ENST00000509518 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHRNA9-203ENST00000509518 PRKCSHP14314 528 aaPredicted RBP12.96□□□□□ -0.33
CHRNA9-203ENST00000509518 FHOD3Q2V2M9 1422 aa12.96□□□□□ -0.34
CHRNA9-203ENST00000509518 CCDC7Q96M83 1385 aa12.95□□□□□ -0.34
CHRNA9-203ENST00000509518 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
CHRNA9-203ENST00000509518 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
CHRNA9-203ENST00000509518 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
CHRNA9-203ENST00000509518 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
CHRNA9-203ENST00000509518 WASHC2AQ641Q2 1341 aa12.92□□□□□ -0.34
CHRNA9-203ENST00000509518 KIF14Q15058 1648 aa12.92□□□□□ -0.34
CHRNA9-203ENST00000509518 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
CHRNA9-203ENST00000509518 HSPA5P11021 654 aaKnown RBP12.91□□□□□ -0.34
CHRNA9-203ENST00000509518 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
CHRNA9-203ENST00000509518 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
CHRNA9-203ENST00000509518 RPRD2Q5VT52 1461 aaKnown RBP12.89□□□□□ -0.35
CHRNA9-203ENST00000509518 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
CHRNA9-203ENST00000509518 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
CHRNA9-203ENST00000509518 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
CHRNA9-203ENST00000509518 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
CHRNA9-203ENST00000509518 TEX14Q8IWB6 1497 aa12.88□□□□□ -0.35
CHRNA9-203ENST00000509518 ROCK2O75116 1388 aaKnown RBP12.87□□□□□ -0.35
CHRNA9-203ENST00000509518 KTN1Q86UP2 1357 aaKnown RBP12.87□□□□□ -0.35
CHRNA9-203ENST00000509518 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
CHRNA9-203ENST00000509518 NUDCQ9Y266 331 aa12.87□□□□□ -0.35
CHRNA9-203ENST00000509518 PTPRKQ15262 1439 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms