RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 SYNJ2O15056 1496 aa19.87■□□□□ 0.77
LYSMD3-204ENST00000509384 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
LYSMD3-204ENST00000509384 ARHGAP35Q9NRY4 1499 aa19.85■□□□□ 0.77
LYSMD3-204ENST00000509384 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
LYSMD3-204ENST00000509384 VPS8Q8N3P4 1428 aa19.84■□□□□ 0.77
LYSMD3-204ENST00000509384 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
LYSMD3-204ENST00000509384 FBLN2P98095 1184 aa19.79■□□□□ 0.76
LYSMD3-204ENST00000509384 EFCAB5A4FU69 1503 aa19.79■□□□□ 0.76
LYSMD3-204ENST00000509384 IQGAP2Q13576 1575 aa19.77■□□□□ 0.76
LYSMD3-204ENST00000509384 KIAA0586Q9BVV6 1533 aa19.75■□□□□ 0.75
LYSMD3-204ENST00000509384 NUP160Q12769 1436 aa19.73■□□□□ 0.75
LYSMD3-204ENST00000509384 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
LYSMD3-204ENST00000509384 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
LYSMD3-204ENST00000509384 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
LYSMD3-204ENST00000509384 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
LYSMD3-204ENST00000509384 UGGT2Q9NYU1 1516 aa19.67■□□□□ 0.74
LYSMD3-204ENST00000509384 APLP2Q06481 763 aa19.65■□□□□ 0.74
LYSMD3-204ENST00000509384 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
LYSMD3-204ENST00000509384 CHD1O14646 1710 aa19.63■□□□□ 0.73
LYSMD3-204ENST00000509384 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
LYSMD3-204ENST00000509384 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
LYSMD3-204ENST00000509384 DISP1Q96F81 1524 aa19.57■□□□□ 0.72
LYSMD3-204ENST00000509384 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
LYSMD3-204ENST00000509384 KIAA0556O60303 1618 aa19.56■□□□□ 0.72
LYSMD3-204ENST00000509384 FYCO1Q9BQS8 1478 aa19.56■□□□□ 0.72
LYSMD3-204ENST00000509384 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
LYSMD3-204ENST00000509384 CASKIN1Q8WXD9 1431 aa19.55■□□□□ 0.72
LYSMD3-204ENST00000509384 TTBK1Q5TCY1 1321 aaPredicted RBP19.54■□□□□ 0.72
LYSMD3-204ENST00000509384 CARMIL2Q6F5E8 1435 aa19.53■□□□□ 0.72
LYSMD3-204ENST00000509384 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.72
LYSMD3-204ENST00000509384 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
LYSMD3-204ENST00000509384 MAP3K1Q13233 1512 aa19.5■□□□□ 0.71
LYSMD3-204ENST00000509384 TIAM1Q13009 1591 aa19.47■□□□□ 0.71
LYSMD3-204ENST00000509384 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
LYSMD3-204ENST00000509384 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
LYSMD3-204ENST00000509384 KANK4Q5T7N3 995 aaPredicted RBP19.44■□□□□ 0.7
LYSMD3-204ENST00000509384 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
LYSMD3-204ENST00000509384 CFAP43Q8NDM7 1665 aa19.42■□□□□ 0.7
LYSMD3-204ENST00000509384 HECW1Q76N89 1606 aa19.41■□□□□ 0.7
LYSMD3-204ENST00000509384 LRRC9Q6ZRR7 1453 aa19.39■□□□□ 0.69
LYSMD3-204ENST00000509384 CCDC18Q5T9S5 1454 aa19.38■□□□□ 0.69
LYSMD3-204ENST00000509384 RAPGEF6Q8TEU7 1601 aa19.35■□□□□ 0.69
LYSMD3-204ENST00000509384 PLB1Q6P1J6 1458 aa19.33■□□□□ 0.69
LYSMD3-204ENST00000509384 PTPRGP23470 1445 aa19.33■□□□□ 0.68
LYSMD3-204ENST00000509384 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.68
LYSMD3-204ENST00000509384 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
LYSMD3-204ENST00000509384 NUP153P49790 1475 aaKnown RBP19.32■□□□□ 0.68
LYSMD3-204ENST00000509384 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
LYSMD3-204ENST00000509384 MTUS2Q5JR59 1369 aa19.3■□□□□ 0.68
LYSMD3-204ENST00000509384 ERCC6L2Q5T890 1561 aa19.3■□□□□ 0.68
LYSMD3-204ENST00000509384 CDK13Q14004 1512 aaKnown RBP19.29■□□□□ 0.68
LYSMD3-204ENST00000509384 ABCA8O94911 1581 aa19.28■□□□□ 0.68
LYSMD3-204ENST00000509384 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
LYSMD3-204ENST00000509384 EHBP1L1Q8N3D4 1523 aa19.26■□□□□ 0.67
LYSMD3-204ENST00000509384 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
LYSMD3-204ENST00000509384 MAGI3Q5TCQ9 1506 aa19.22■□□□□ 0.67
LYSMD3-204ENST00000509384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.21■□□□□ 0.67
LYSMD3-204ENST00000509384 HNRNPUL2Q1KMD3 747 aaKnown RBP19.21■□□□□ 0.67
LYSMD3-204ENST00000509384 PHLDB1Q86UU1 1377 aa19.21■□□□□ 0.67
LYSMD3-204ENST00000509384 RRBP1Q9P2E9 1410 aaKnown RBP19.21■□□□□ 0.67
LYSMD3-204ENST00000509384 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
LYSMD3-204ENST00000509384 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
LYSMD3-204ENST00000509384 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
LYSMD3-204ENST00000509384 SUPT6HQ7KZ85 1726 aaKnown RBP19.17■□□□□ 0.66
LYSMD3-204ENST00000509384 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
LYSMD3-204ENST00000509384 ATP10BO94823 1461 aa19.15■□□□□ 0.66
LYSMD3-204ENST00000509384 TROQ12816 1431 aaPredicted RBP19.14■□□□□ 0.65
LYSMD3-204ENST00000509384 ARHGEF11O15085 1522 aa19.13■□□□□ 0.65
LYSMD3-204ENST00000509384 UHRF1BP1LA0JNW5 1464 aa19.12■□□□□ 0.65
LYSMD3-204ENST00000509384 MYOM3Q5VTT5 1437 aa19.1■□□□□ 0.65
LYSMD3-204ENST00000509384 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
LYSMD3-204ENST00000509384 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
LYSMD3-204ENST00000509384 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
LYSMD3-204ENST00000509384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.04■□□□□ 0.64
LYSMD3-204ENST00000509384 ADCY10Q96PN6 1610 aa19.03■□□□□ 0.64
LYSMD3-204ENST00000509384 KDM5BQ9UGL1 1544 aa19.03■□□□□ 0.64
LYSMD3-204ENST00000509384 KIF14Q15058 1648 aa19.02■□□□□ 0.63
LYSMD3-204ENST00000509384 MIA2Q96PC5 1412 aa19■□□□□ 0.63
LYSMD3-204ENST00000509384 ZCCHC11Q5TAX3 1644 aaKnown RBP18.99■□□□□ 0.63
LYSMD3-204ENST00000509384 ITGAEP38570 1179 aa18.99■□□□□ 0.63
LYSMD3-204ENST00000509384 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
LYSMD3-204ENST00000509384 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
LYSMD3-204ENST00000509384 TCOF1Q13428 1488 aaKnown RBP18.96■□□□□ 0.63
LYSMD3-204ENST00000509384 ABCC10Q5T3U5 1492 aa18.95■□□□□ 0.62
LYSMD3-204ENST00000509384 HRCP23327 699 aa18.95■□□□□ 0.62
LYSMD3-204ENST00000509384 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
LYSMD3-204ENST00000509384 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
LYSMD3-204ENST00000509384 CFDP1Q9UEE9 299 aaPredicted RBP18.9■□□□□ 0.62
LYSMD3-204ENST00000509384 RIMBP3CA6NJZ7 1639 aa18.89■□□□□ 0.61
LYSMD3-204ENST00000509384 RIMBP3BA6NNM3 1639 aa18.89■□□□□ 0.61
LYSMD3-204ENST00000509384 RIMBP3Q9UFD9 1639 aa18.89■□□□□ 0.61
LYSMD3-204ENST00000509384 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
LYSMD3-204ENST00000509384 WDR7Q9Y4E6 1490 aa18.88■□□□□ 0.61
LYSMD3-204ENST00000509384 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
LYSMD3-204ENST00000509384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.86■□□□□ 0.61
LYSMD3-204ENST00000509384 CAMSAP2Q08AD1 1489 aa18.86■□□□□ 0.61
LYSMD3-204ENST00000509384 TTC37Q6PGP7 1564 aa18.85■□□□□ 0.61
LYSMD3-204ENST00000509384 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
LYSMD3-204ENST00000509384 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
LYSMD3-204ENST00000509384 ASXL2Q76L83 1435 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms