RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
SPOCK1-206ENST00000509293 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
SPOCK1-206ENST00000509293 CTTNBP2Q8WZ74 1663 aa23.16■■□□□ 1.3
SPOCK1-206ENST00000509293 OSCARQ8IYS5 282 aa23.14■■□□□ 1.29
SPOCK1-206ENST00000509293 IQGAP2Q13576 1575 aa23.12■■□□□ 1.29
SPOCK1-206ENST00000509293 CLASP1Q7Z460 1538 aa23.09■■□□□ 1.29
SPOCK1-206ENST00000509293 UGGT2Q9NYU1 1516 aa23.04■■□□□ 1.28
SPOCK1-206ENST00000509293 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
SPOCK1-206ENST00000509293 JPH4Q96JJ6 628 aa23.02■■□□□ 1.28
SPOCK1-206ENST00000509293 SHROOM2Q13796 1616 aa23■■□□□ 1.27
SPOCK1-206ENST00000509293 CLIP1P30622 1438 aa22.99■■□□□ 1.27
SPOCK1-206ENST00000509293 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
SPOCK1-206ENST00000509293 SAMD9Q5K651 1589 aa22.95■■□□□ 1.26
SPOCK1-206ENST00000509293 ARHGAP35Q9NRY4 1499 aa22.92■■□□□ 1.26
SPOCK1-206ENST00000509293 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
SPOCK1-206ENST00000509293 DISP1Q96F81 1524 aa22.92■■□□□ 1.26
SPOCK1-206ENST00000509293 PRG4Q92954 1404 aaPredicted RBP22.91■■□□□ 1.26
SPOCK1-206ENST00000509293 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
SPOCK1-206ENST00000509293 KIAA0556O60303 1618 aa22.88■■□□□ 1.25
SPOCK1-206ENST00000509293 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
SPOCK1-206ENST00000509293 FHOD3Q2V2M9 1422 aa22.8■■□□□ 1.24
SPOCK1-206ENST00000509293 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
SPOCK1-206ENST00000509293 FMN1Q68DA7 1419 aa22.77■■□□□ 1.24
SPOCK1-206ENST00000509293 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
SPOCK1-206ENST00000509293 PTPRGP23470 1445 aa22.74■■□□□ 1.23
SPOCK1-206ENST00000509293 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
SPOCK1-206ENST00000509293 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
SPOCK1-206ENST00000509293 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
SPOCK1-206ENST00000509293 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
SPOCK1-206ENST00000509293 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
SPOCK1-206ENST00000509293 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
SPOCK1-206ENST00000509293 FYCO1Q9BQS8 1478 aa22.62■■□□□ 1.21
SPOCK1-206ENST00000509293 ABCA8O94911 1581 aa22.62■■□□□ 1.21
SPOCK1-206ENST00000509293 UACAQ9BZF9 1416 aa22.6■■□□□ 1.21
SPOCK1-206ENST00000509293 UHRF1BP1LA0JNW5 1464 aa22.59■■□□□ 1.21
SPOCK1-206ENST00000509293 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
SPOCK1-206ENST00000509293 RAPGEF6Q8TEU7 1601 aa22.58■■□□□ 1.21
SPOCK1-206ENST00000509293 PCF11O94913 1555 aaKnown RBP22.58■■□□□ 1.2
SPOCK1-206ENST00000509293 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
SPOCK1-206ENST00000509293 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
SPOCK1-206ENST00000509293 HECW1Q76N89 1606 aa22.55■■□□□ 1.2
SPOCK1-206ENST00000509293 ABCC2Q92887 1545 aa22.54■■□□□ 1.2
SPOCK1-206ENST00000509293 NUP153P49790 1475 aaKnown RBP22.53■■□□□ 1.2
SPOCK1-206ENST00000509293 MAP3K1Q13233 1512 aa22.52■■□□□ 1.19
SPOCK1-206ENST00000509293 CCDC18Q5T9S5 1454 aa22.49■■□□□ 1.19
SPOCK1-206ENST00000509293 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
SPOCK1-206ENST00000509293 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
SPOCK1-206ENST00000509293 APLP2Q06481 763 aa22.45■■□□□ 1.18
SPOCK1-206ENST00000509293 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
SPOCK1-206ENST00000509293 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
SPOCK1-206ENST00000509293 KDM5BQ9UGL1 1544 aa22.45■■□□□ 1.18
SPOCK1-206ENST00000509293 ATP10BO94823 1461 aa22.43■■□□□ 1.18
SPOCK1-206ENST00000509293 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
SPOCK1-206ENST00000509293 LRRIQ1Q96JM4 1722 aa22.4■■□□□ 1.18
SPOCK1-206ENST00000509293 CFAP43Q8NDM7 1665 aa22.39■■□□□ 1.18
SPOCK1-206ENST00000509293 CDK13Q14004 1512 aaKnown RBP22.38■■□□□ 1.17
SPOCK1-206ENST00000509293 CDK11AQ9UQ88 783 aaPredicted RBP22.38■■□□□ 1.17
SPOCK1-206ENST00000509293 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
SPOCK1-206ENST00000509293 ZCCHC11Q5TAX3 1644 aaKnown RBP22.34■■□□□ 1.17
SPOCK1-206ENST00000509293 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
SPOCK1-206ENST00000509293 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
SPOCK1-206ENST00000509293 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
SPOCK1-206ENST00000509293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
SPOCK1-206ENST00000509293 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
SPOCK1-206ENST00000509293 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
SPOCK1-206ENST00000509293 TROQ12816 1431 aaPredicted RBP22.29■■□□□ 1.16
SPOCK1-206ENST00000509293 EHBP1L1Q8N3D4 1523 aa22.28■■□□□ 1.16
SPOCK1-206ENST00000509293 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
SPOCK1-206ENST00000509293 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
SPOCK1-206ENST00000509293 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
SPOCK1-206ENST00000509293 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
SPOCK1-206ENST00000509293 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
SPOCK1-206ENST00000509293 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
SPOCK1-206ENST00000509293 KIF14Q15058 1648 aa22.15■■□□□ 1.14
SPOCK1-206ENST00000509293 NCOA2Q15596 1464 aa22.14■■□□□ 1.13
SPOCK1-206ENST00000509293 PPARGC1BQ86YN6 1023 aaKnown RBP22.13■■□□□ 1.13
SPOCK1-206ENST00000509293 ABCC10Q5T3U5 1492 aa22.11■■□□□ 1.13
SPOCK1-206ENST00000509293 KCNH8Q96L42 1107 aa22.09■■□□□ 1.13
SPOCK1-206ENST00000509293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.07■■□□□ 1.12
SPOCK1-206ENST00000509293 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
SPOCK1-206ENST00000509293 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
SPOCK1-206ENST00000509293 GLI2P10070 1586 aa22.06■■□□□ 1.12
SPOCK1-206ENST00000509293 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
SPOCK1-206ENST00000509293 MYOM3Q5VTT5 1437 aa22.05■■□□□ 1.12
SPOCK1-206ENST00000509293 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
SPOCK1-206ENST00000509293 MIA2Q96PC5 1412 aa22.02■■□□□ 1.12
SPOCK1-206ENST00000509293 TTC37Q6PGP7 1564 aa22.02■■□□□ 1.12
SPOCK1-206ENST00000509293 DIP2BQ9P265 1576 aa22.01■■□□□ 1.11
SPOCK1-206ENST00000509293 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
SPOCK1-206ENST00000509293 PLCH2O75038 1416 aa21.99■■□□□ 1.11
SPOCK1-206ENST00000509293 ITSN2Q9NZM3 1697 aa21.98■■□□□ 1.11
SPOCK1-206ENST00000509293 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
SPOCK1-206ENST00000509293 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
SPOCK1-206ENST00000509293 PREX2Q70Z35 1606 aa21.96■■□□□ 1.11
SPOCK1-206ENST00000509293 FAM69CQ0P6D2 419 aa21.96■■□□□ 1.11
SPOCK1-206ENST00000509293 CDC42BPAQ5VT25 1732 aa21.96■■□□□ 1.11
SPOCK1-206ENST00000509293 CD109Q6YHK3 1445 aa21.96■■□□□ 1.11
SPOCK1-206ENST00000509293 MYO5CQ9NQX4 1742 aa21.95■■□□□ 1.1
SPOCK1-206ENST00000509293 CFDP1Q9UEE9 299 aaPredicted RBP21.95■■□□□ 1.1
SPOCK1-206ENST00000509293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms