RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 TOP2AP11388 1531 aaKnown RBP7.27□□□□□ -1.25
RNF4-211ENST00000509206 TARBP1Q13395 1621 aaKnown RBP7.27□□□□□ -1.25
RNF4-211ENST00000509206 POLA1P09884 1462 aaPredicted RBP7.27□□□□□ -1.25
RNF4-211ENST00000509206 MAGI1Q96QZ7 1491 aaPredicted RBP7.27□□□□□ -1.25
RNF4-211ENST00000509206 SYNJ2O15056 1496 aa7.26□□□□□ -1.25
RNF4-211ENST00000509206 GRIN2BQ13224 1484 aa7.25□□□□□ -1.25
RNF4-211ENST00000509206 CCDC88BA6NC98 1476 aa7.24□□□□□ -1.25
RNF4-211ENST00000509206 PRDM2Q13029 1718 aa7.24□□□□□ -1.25
RNF4-211ENST00000509206 LMTK3Q96Q04 1460 aa7.21□□□□□ -1.26
RNF4-211ENST00000509206 ERCC6L2Q5T890 1561 aa7.2□□□□□ -1.26
RNF4-211ENST00000509206 KDM6BO15054 1643 aa7.2□□□□□ -1.26
RNF4-211ENST00000509206 ABCC10Q5T3U5 1492 aa7.19□□□□□ -1.26
RNF4-211ENST00000509206 WDR97A6NE52 1622 aa7.19□□□□□ -1.26
RNF4-211ENST00000509206 FGD5Q6ZNL6 1462 aa7.18□□□□□ -1.26
RNF4-211ENST00000509206 KIF13AQ9H1H9 1805 aa7.18□□□□□ -1.26
RNF4-211ENST00000509206 SOCS7O14512 581 aa7.18□□□□□ -1.26
RNF4-211ENST00000509206 HECW2Q9P2P5 1572 aa7.17□□□□□ -1.26
RNF4-211ENST00000509206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.17□□□□□ -1.262e-10■■□□□ 13
RNF4-211ENST00000509206 ADGRL1O94910 1474 aa7.17□□□□□ -1.26
RNF4-211ENST00000509206 ZBTB22O15209 634 aa7.16□□□□□ -1.26
RNF4-211ENST00000509206 JPH4Q96JJ6 628 aa7.16□□□□□ -1.26
RNF4-211ENST00000509206 CEP170Q5SW79 1584 aa7.16□□□□□ -1.26
RNF4-211ENST00000509206 PRG4Q92954 1404 aaPredicted RBP7.15□□□□□ -1.27
RNF4-211ENST00000509206 DISP3Q9P2K9 1392 aa7.14□□□□□ -1.27
RNF4-211ENST00000509206 GRIN2AQ12879 1464 aa7.13□□□□□ -1.27
RNF4-211ENST00000509206 TTBK1Q5TCY1 1321 aaPredicted RBP7.12□□□□□ -1.27
RNF4-211ENST00000509206 TSPOAP1O95153 1857 aa7.12□□□□□ -1.27
RNF4-211ENST00000509206 NUP160Q12769 1436 aa7.1□□□□□ -1.27
RNF4-211ENST00000509206 ILDR2Q71H61 639 aa7.1□□□□□ -1.27
RNF4-211ENST00000509206 DIP2BQ9P265 1576 aa7.1□□□□□ -1.27
RNF4-211ENST00000509206 MAPKBP1O60336 1514 aa7.1□□□□□ -1.27
RNF4-211ENST00000509206 PBRM1Q86U86 1689 aa7.09□□□□□ -1.27
RNF4-211ENST00000509206 FOXD4L1Q9NU39 408 aa7.09□□□□□ -1.27
RNF4-211ENST00000509206 FHAD1B1AJZ9 1412 aa7.08□□□□□ -1.28
RNF4-211ENST00000509206 CUX1P39880 1505 aa7.07□□□□□ -1.28
RNF4-211ENST00000509206 RNF39Q9H2S5 420 aa7.07□□□□□ -1.28
RNF4-211ENST00000509206 ABCA10Q8WWZ4 1543 aa7.06□□□□□ -1.28
RNF4-211ENST00000509206 SHROOM2Q13796 1616 aa7.05□□□□□ -1.28
RNF4-211ENST00000509206 TOP2BQ02880 1626 aa7.04□□□□□ -1.28
RNF4-211ENST00000509206 CERKQ8TCT0 537 aa7.03□□□□□ -1.28
RNF4-211ENST00000509206 WRNQ14191 1432 aaPredicted RBP eCLIP7.02□□□□□ -1.29
RNF4-211ENST00000509206 ABCA5Q8WWZ7 1642 aa7.02□□□□□ -1.29
RNF4-211ENST00000509206 SLC4A2P04920 1241 aa7.02□□□□□ -1.29
RNF4-211ENST00000509206 ADAMTS12P58397 1594 aa7.02□□□□□ -1.29
RNF4-211ENST00000509206 PTPRGP23470 1445 aa7.01□□□□□ -1.29
RNF4-211ENST00000509206 ADCY10Q96PN6 1610 aa7.01□□□□□ -1.29
RNF4-211ENST00000509206 PLB1Q6P1J6 1458 aa7.01□□□□□ -1.29
RNF4-211ENST00000509206 TEX14Q8IWB6 1497 aa7.01□□□□□ -1.29
RNF4-211ENST00000509206 CACNB1Q02641 598 aaPredicted RBP7.01□□□□□ -1.29
RNF4-211ENST00000509206 C1QBPQ07021 282 aaKnown RBP7□□□□□ -1.29
RNF4-211ENST00000509206 ASXL2Q76L83 1435 aa7□□□□□ -1.29
RNF4-211ENST00000509206 COL17A1Q9UMD9 1497 aaPredicted RBP6.99□□□□□ -1.29
RNF4-211ENST00000509206 U3KPZ7 1027 aaPredicted RBP6.99□□□□□ -1.29
RNF4-211ENST00000509206 ARID4BQ4LE39 1312 aaPredicted RBP6.99□□□□□ -1.29
RNF4-211ENST00000509206 GLI2P10070 1586 aa6.96□□□□□ -1.29
RNF4-211ENST00000509206 HSPA2P54652 639 aa6.96□□□□□ -1.3
RNF4-211ENST00000509206 KCNH8Q96L42 1107 aa6.96□□□□□ -1.3
RNF4-211ENST00000509206 ERICH3Q5RHP9 1530 aa6.96□□□□□ -1.3
RNF4-211ENST00000509206 ABCC2Q92887 1545 aa6.96□□□□□ -1.3
RNF4-211ENST00000509206 CARMIL2Q6F5E8 1435 aa6.95□□□□□ -1.3
RNF4-211ENST00000509206 TNIKQ9UKE5 1360 aa6.95□□□□□ -1.3
RNF4-211ENST00000509206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.94□□□□□ -1.3
RNF4-211ENST00000509206 HNRNPUL2Q1KMD3 747 aaKnown RBP6.94□□□□□ -1.3
RNF4-211ENST00000509206 PTPRMP28827 1452 aa6.93□□□□□ -1.3
RNF4-211ENST00000509206 KIAA0586Q9BVV6 1533 aa6.93□□□□□ -1.3
RNF4-211ENST00000509206 EPRSP07814 1512 aaKnown RBP6.92□□□□□ -1.3
RNF4-211ENST00000509206 MYCNP04198 464 aaPredicted RBP6.92□□□□□ -1.3
RNF4-211ENST00000509206 PPRC1Q5VV67 1664 aaKnown RBP6.92□□□□□ -1.3
RNF4-211ENST00000509206 UACAQ9BZF9 1416 aa6.92□□□□□ -1.3
RNF4-211ENST00000509206 RUSC2Q8N2Y8 1516 aa6.91□□□□□ -1.3
RNF4-211ENST00000509206 CD109Q6YHK3 1445 aa6.91□□□□□ -1.3
RNF4-211ENST00000509206 SPATA31D1Q6ZQQ2 1576 aa6.91□□□□□ -1.3
RNF4-211ENST00000509206 APLP2Q06481 763 aa6.9□□□□□ -1.3
RNF4-211ENST00000509206 PCF11O94913 1555 aaKnown RBP6.9□□□□□ -1.31
RNF4-211ENST00000509206 SAMD1Q6SPF0 538 aaPredicted RBP6.89□□□□□ -1.31
RNF4-211ENST00000509206 FAM9AQ8IZU1 332 aaPredicted RBP6.89□□□□□ -1.31
RNF4-211ENST00000509206 UHRF1BP1LA0JNW5 1464 aa6.88□□□□□ -1.31
RNF4-211ENST00000509206 CUL7Q14999 1698 aa6.87□□□□□ -1.31
RNF4-211ENST00000509206 MAP3K4Q9Y6R4 1608 aa6.87□□□□□ -1.31
RNF4-211ENST00000509206 KIF21BO75037 1637 aa6.87□□□□□ -1.31
RNF4-211ENST00000509206 RAPGEF3O95398 923 aa6.86□□□□□ -1.31
RNF4-211ENST00000509206 CAPN15O75808 1086 aa6.85□□□□□ -1.31
RNF4-211ENST00000509206 KDM5BQ9UGL1 1544 aa6.85□□□□□ -1.31
RNF4-211ENST00000509206 WDR7Q9Y4E6 1490 aa6.85□□□□□ -1.31
RNF4-211ENST00000509206 MLECQ14165 292 aa6.84□□□□□ -1.31
RNF4-211ENST00000509206 MAGI3Q5TCQ9 1506 aa6.84□□□□□ -1.31
RNF4-211ENST00000509206 IGF1RP08069 1367 aa6.83□□□□□ -1.32
RNF4-211ENST00000509206 PHLDB1Q86UU1 1377 aa6.82□□□□□ -1.32
RNF4-211ENST00000509206 ADAMTSL3P82987 1691 aa6.82□□□□□ -1.32
RNF4-211ENST00000509206 SPINK5Q9NQ38 1064 aaPredicted RBP6.82□□□□□ -1.32
RNF4-211ENST00000509206 POGZQ7Z3K3 1410 aa6.82□□□□□ -1.32
RNF4-211ENST00000509206 CARMIL1Q5VZK9 1371 aa6.82□□□□□ -1.32
RNF4-211ENST00000509206 BIVM-ERCC5R4GMW8 1640 aa6.81□□□□□ -1.32
RNF4-211ENST00000509206 UBAP1LF5GYI3 381 aa6.81□□□□□ -1.32
RNF4-211ENST00000509206 ATXN8OSP0DMR3 200 aa6.81□□□□□ -1.32
RNF4-211ENST00000509206 KIF27Q86VH2 1401 aa6.81□□□□□ -1.32
RNF4-211ENST00000509206 ARAP3Q8WWN8 1544 aa6.81□□□□□ -1.32
RNF4-211ENST00000509206 ZCCHC11Q5TAX3 1644 aaKnown RBP6.8□□□□□ -1.32
RNF4-211ENST00000509206 ARID3CA6NKF2 412 aa6.8□□□□□ -1.32
RNF4-211ENST00000509206 SUPT5HO00267 1087 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms