RNA–Protein interactions for RNA: ENST00000508929.1

ABCC3-209, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 2

Gene ABCC3, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-209ENST00000508929 ADAMTS12P58397 1594 aa14.91□□□□□ -0.02
ABCC3-209ENST00000508929 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
ABCC3-209ENST00000508929 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
ABCC3-209ENST00000508929 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
ABCC3-209ENST00000508929 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
ABCC3-209ENST00000508929 GRIN2AQ12879 1464 aa14.83□□□□□ -0.03
ABCC3-209ENST00000508929 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.03
ABCC3-209ENST00000508929 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
ABCC3-209ENST00000508929 KIAA0586Q9BVV6 1533 aa14.82□□□□□ -0.04
ABCC3-209ENST00000508929 CTTNBP2Q8WZ74 1663 aa14.8□□□□□ -0.04
ABCC3-209ENST00000508929 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
ABCC3-209ENST00000508929 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
ABCC3-209ENST00000508929 NUP160Q12769 1436 aa14.77□□□□□ -0.04
ABCC3-209ENST00000508929 APLP2Q06481 763 aa14.75□□□□□ -0.05
ABCC3-209ENST00000508929 IQGAP2Q13576 1575 aa14.75□□□□□ -0.05
ABCC3-209ENST00000508929 FBLN2P98095 1184 aa14.74□□□□□ -0.05
ABCC3-209ENST00000508929 UGGT2Q9NYU1 1516 aa14.74□□□□□ -0.05
ABCC3-209ENST00000508929 FMN1Q68DA7 1419 aa14.72□□□□□ -0.05
ABCC3-209ENST00000508929 SAMD9Q5K651 1589 aa14.72□□□□□ -0.05
ABCC3-209ENST00000508929 JPH4Q96JJ6 628 aa14.69□□□□□ -0.06
ABCC3-209ENST00000508929 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
ABCC3-209ENST00000508929 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
ABCC3-209ENST00000508929 P3H3Q8IVL6 736 aa14.67□□□□□ -0.06
ABCC3-209ENST00000508929 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
ABCC3-209ENST00000508929 CASKIN1Q8WXD9 1431 aa14.66□□□□□ -0.06
ABCC3-209ENST00000508929 CARMIL2Q6F5E8 1435 aa14.64□□□□□ -0.07
ABCC3-209ENST00000508929 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
ABCC3-209ENST00000508929 DISP1Q96F81 1524 aa14.62□□□□□ -0.07
ABCC3-209ENST00000508929 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
ABCC3-209ENST00000508929 CHD1O14646 1710 aa14.58□□□□□ -0.08
ABCC3-209ENST00000508929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
ABCC3-209ENST00000508929 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
ABCC3-209ENST00000508929 KANK4Q5T7N3 995 aaPredicted RBP14.54□□□□□ -0.08
ABCC3-209ENST00000508929 SHROOM2Q13796 1616 aa14.53□□□□□ -0.08
ABCC3-209ENST00000508929 PCF11O94913 1555 aaKnown RBP14.53□□□□□ -0.08
ABCC3-209ENST00000508929 TIAM1Q13009 1591 aa14.53□□□□□ -0.08
ABCC3-209ENST00000508929 PRG4Q92954 1404 aaPredicted RBP14.53□□□□□ -0.08
ABCC3-209ENST00000508929 CLASP1Q7Z460 1538 aa14.52□□□□□ -0.08
ABCC3-209ENST00000508929 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.09
ABCC3-209ENST00000508929 CCDC18Q5T9S5 1454 aa14.51□□□□□ -0.09
ABCC3-209ENST00000508929 LRRC9Q6ZRR7 1453 aa14.51□□□□□ -0.09
ABCC3-209ENST00000508929 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
ABCC3-209ENST00000508929 TTBK1Q5TCY1 1321 aaPredicted RBP14.49□□□□□ -0.09
ABCC3-209ENST00000508929 PTPRGP23470 1445 aa14.49□□□□□ -0.09
ABCC3-209ENST00000508929 HECW1Q76N89 1606 aa14.48□□□□□ -0.09
ABCC3-209ENST00000508929 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.09
ABCC3-209ENST00000508929 CDK11AQ9UQ88 783 aaPredicted RBP14.46□□□□□ -0.09
ABCC3-209ENST00000508929 EPRSP07814 1512 aaKnown RBP14.46□□□□□ -0.1
ABCC3-209ENST00000508929 RAPGEF6Q8TEU7 1601 aa14.43□□□□□ -0.1
ABCC3-209ENST00000508929 MTUS2Q5JR59 1369 aa14.43□□□□□ -0.1
ABCC3-209ENST00000508929 NUP153P49790 1475 aaKnown RBP14.43□□□□□ -0.1
ABCC3-209ENST00000508929 ABCA8O94911 1581 aa14.42□□□□□ -0.1
ABCC3-209ENST00000508929 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
ABCC3-209ENST00000508929 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
ABCC3-209ENST00000508929 UACAQ9BZF9 1416 aa14.39□□□□□ -0.11
ABCC3-209ENST00000508929 EHBP1L1Q8N3D4 1523 aa14.38□□□□□ -0.11
ABCC3-209ENST00000508929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.37□□□□□ -0.11
ABCC3-209ENST00000508929 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
ABCC3-209ENST00000508929 UHRF1BP1LA0JNW5 1464 aa14.36□□□□□ -0.11
ABCC3-209ENST00000508929 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
ABCC3-209ENST00000508929 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
ABCC3-209ENST00000508929 ATP10BO94823 1461 aa14.34□□□□□ -0.11
ABCC3-209ENST00000508929 PLEKHD1A6NEE1 506 aa14.34□□□□□ -0.11
ABCC3-209ENST00000508929 ARHGEF11O15085 1522 aa14.33□□□□□ -0.12
ABCC3-209ENST00000508929 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.12
ABCC3-209ENST00000508929 ERCC6L2Q5T890 1561 aa14.33□□□□□ -0.12
ABCC3-209ENST00000508929 TROQ12816 1431 aaPredicted RBP14.32□□□□□ -0.12
ABCC3-209ENST00000508929 NCOA2Q15596 1464 aa14.32□□□□□ -0.12
ABCC3-209ENST00000508929 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
ABCC3-209ENST00000508929 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
ABCC3-209ENST00000508929 SUPT6HQ7KZ85 1726 aaKnown RBP14.31□□□□□ -0.12
ABCC3-209ENST00000508929 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
ABCC3-209ENST00000508929 MYOM3Q5VTT5 1437 aa14.3□□□□□ -0.12
ABCC3-209ENST00000508929 MIA2Q96PC5 1412 aa14.29□□□□□ -0.12
ABCC3-209ENST00000508929 FGD6Q6ZV73 1430 aa14.28□□□□□ -0.12
ABCC3-209ENST00000508929 ARID3CA6NKF2 412 aa14.27□□□□□ -0.13
ABCC3-209ENST00000508929 KDM5BQ9UGL1 1544 aa14.26□□□□□ -0.13
ABCC3-209ENST00000508929 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
ABCC3-209ENST00000508929 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
ABCC3-209ENST00000508929 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
ABCC3-209ENST00000508929 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
ABCC3-209ENST00000508929 TCOF1Q13428 1488 aaKnown RBP14.22□□□□□ -0.13
ABCC3-209ENST00000508929 ADCY10Q96PN6 1610 aa14.22□□□□□ -0.13
ABCC3-209ENST00000508929 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
ABCC3-209ENST00000508929 DHX57Q6P158 1386 aaKnown RBP14.19□□□□□ -0.14
ABCC3-209ENST00000508929 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
ABCC3-209ENST00000508929 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
ABCC3-209ENST00000508929 CFDP1Q9UEE9 299 aaPredicted RBP14.17□□□□□ -0.14
ABCC3-209ENST00000508929 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
ABCC3-209ENST00000508929 KIF14Q15058 1648 aa14.16□□□□□ -0.14
ABCC3-209ENST00000508929 PTPN23Q9H3S7 1636 aa14.15□□□□□ -0.14
ABCC3-209ENST00000508929 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
ABCC3-209ENST00000508929 ACIN1Q9UKV3 1341 aaKnown RBP14.14□□□□□ -0.15
ABCC3-209ENST00000508929 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
ABCC3-209ENST00000508929 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
ABCC3-209ENST00000508929 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
ABCC3-209ENST00000508929 ITSN2Q9NZM3 1697 aa14.12□□□□□ -0.15
ABCC3-209ENST00000508929 ITGAEP38570 1179 aa14.12□□□□□ -0.15
ABCC3-209ENST00000508929 RSPH4AQ5TD94 716 aa14.12□□□□□ -0.15
ABCC3-209ENST00000508929 SETD5Q9C0A6 1442 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms