RNA–Protein interactions for RNA: ENST00000508912.1

SSBP2-210, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 256 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-210ENST00000508912 PRDM2Q13029 1718 aa10.52□□□□□ -0.73
SSBP2-210ENST00000508912 SOGA1O94964 1423 aa10.51□□□□□ -0.73
SSBP2-210ENST00000508912 RAD54L2Q9Y4B4 1467 aa10.51□□□□□ -0.73
SSBP2-210ENST00000508912 PPP6R1Q9UPN7 881 aa10.51□□□□□ -0.73
SSBP2-210ENST00000508912 CEP170Q5SW79 1584 aa10.51□□□□□ -0.73
SSBP2-210ENST00000508912 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
SSBP2-210ENST00000508912 TSPOAP1O95153 1857 aa10.46□□□□□ -0.74
SSBP2-210ENST00000508912 COL17A1Q9UMD9 1497 aaPredicted RBP10.43□□□□□ -0.74
SSBP2-210ENST00000508912 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
SSBP2-210ENST00000508912 NUP160Q12769 1436 aa10.41□□□□□ -0.74
SSBP2-210ENST00000508912 PRG4Q92954 1404 aaPredicted RBP10.38□□□□□ -0.75
SSBP2-210ENST00000508912 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
SSBP2-210ENST00000508912 PCF11O94913 1555 aaKnown RBP10.37□□□□□ -0.75
SSBP2-210ENST00000508912 TOP2AP11388 1531 aaKnown RBP10.36□□□□□ -0.75
SSBP2-210ENST00000508912 PTPRMP28827 1452 aa10.34□□□□□ -0.75
SSBP2-210ENST00000508912 PPRC1Q5VV67 1664 aaKnown RBP10.34□□□□□ -0.75
SSBP2-210ENST00000508912 ADCY10Q96PN6 1610 aa10.33□□□□□ -0.76
SSBP2-210ENST00000508912 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
SSBP2-210ENST00000508912 GLI2P10070 1586 aa10.32□□□□□ -0.76
SSBP2-210ENST00000508912 FGD5Q6ZNL6 1462 aa10.32□□□□□ -0.76
SSBP2-210ENST00000508912 PBRM1Q86U86 1689 aa10.29□□□□□ -0.76
SSBP2-210ENST00000508912 CCDC88BA6NC98 1476 aa10.28□□□□□ -0.76
SSBP2-210ENST00000508912 TEX14Q8IWB6 1497 aa10.28□□□□□ -0.76
SSBP2-210ENST00000508912 HSPA2P54652 639 aa10.27□□□□□ -0.77
SSBP2-210ENST00000508912 PLB1Q6P1J6 1458 aa10.25□□□□□ -0.77
SSBP2-210ENST00000508912 ASXL2Q76L83 1435 aa10.23□□□□□ -0.77
SSBP2-210ENST00000508912 ADAMTSL3P82987 1691 aa10.22□□□□□ -0.77
SSBP2-210ENST00000508912 ABCA5Q8WWZ7 1642 aa10.2□□□□□ -0.78
SSBP2-210ENST00000508912 FHAD1B1AJZ9 1412 aa10.19□□□□□ -0.78
SSBP2-210ENST00000508912 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
SSBP2-210ENST00000508912 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
SSBP2-210ENST00000508912 ABCA10Q8WWZ4 1543 aa10.18□□□□□ -0.78
SSBP2-210ENST00000508912 KIF21BO75037 1637 aa10.18□□□□□ -0.78
SSBP2-210ENST00000508912 MAP3K4Q9Y6R4 1608 aa10.18□□□□□ -0.78
SSBP2-210ENST00000508912 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
SSBP2-210ENST00000508912 ABCC2Q92887 1545 aa10.17□□□□□ -0.78
SSBP2-210ENST00000508912 EPRSP07814 1512 aaKnown RBP10.16□□□□□ -0.78
SSBP2-210ENST00000508912 IQSEC2Q5JU85 1478 aa10.16□□□□□ -0.78
SSBP2-210ENST00000508912 PIAS4Q8N2W9 510 aaPredicted RBP10.15□□□□□ -0.78
SSBP2-210ENST00000508912 CUX1P39880 1505 aa10.15□□□□□ -0.78
SSBP2-210ENST00000508912 YEATS2Q9ULM3 1422 aa10.12□□□□□ -0.79
SSBP2-210ENST00000508912 MED1Q15648 1581 aaPredicted RBP10.1□□□□□ -0.79
SSBP2-210ENST00000508912 PTPRGP23470 1445 aa10.1□□□□□ -0.79
SSBP2-210ENST00000508912 MADDQ8WXG6 1647 aa10.08□□□□□ -0.8
SSBP2-210ENST00000508912 KCNA4P22459 653 aa10.08□□□□□ -0.8
SSBP2-210ENST00000508912 BCORL1Q5H9F3 1711 aa10.07□□□□□ -0.8
SSBP2-210ENST00000508912 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
SSBP2-210ENST00000508912 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
SSBP2-210ENST00000508912 UHRF1BP1LA0JNW5 1464 aa10.05□□□□□ -0.8
SSBP2-210ENST00000508912 LTBP4Q8N2S1 1624 aa10.05□□□□□ -0.8
SSBP2-210ENST00000508912 PTPRTO14522 1441 aa10.04□□□□□ -0.8
SSBP2-210ENST00000508912 ARID4BQ4LE39 1312 aaPredicted RBP10.04□□□□□ -0.8
SSBP2-210ENST00000508912 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
SSBP2-210ENST00000508912 UBAP1LF5GYI3 381 aa10.03□□□□□ -0.8
SSBP2-210ENST00000508912 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.8
SSBP2-210ENST00000508912 CD109Q6YHK3 1445 aa10.02□□□□□ -0.81
SSBP2-210ENST00000508912 KDM5BQ9UGL1 1544 aa10.01□□□□□ -0.81
SSBP2-210ENST00000508912 CUL7Q14999 1698 aa10□□□□□ -0.81
SSBP2-210ENST00000508912 TNIKQ9UKE5 1360 aa10□□□□□ -0.81
SSBP2-210ENST00000508912 RIMS1Q86UR5 1692 aaKnown RBP9.99□□□□□ -0.81
SSBP2-210ENST00000508912 STRCQ7RTU9 1775 aa9.99□□□□□ -0.81
SSBP2-210ENST00000508912 HSPA1LP34931 641 aa9.98□□□□□ -0.81
SSBP2-210ENST00000508912 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
SSBP2-210ENST00000508912 TTBK1Q5TCY1 1321 aaPredicted RBP9.97□□□□□ -0.81
SSBP2-210ENST00000508912 WRNQ14191 1432 aaPredicted RBP eCLIP9.96□□□□□ -0.82
SSBP2-210ENST00000508912 PHLDB1Q86UU1 1377 aa9.95□□□□□ -0.82
SSBP2-210ENST00000508912 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
SSBP2-210ENST00000508912 CFAP43Q8NDM7 1665 aa9.94□□□□□ -0.82
SSBP2-210ENST00000508912 CARMIL2Q6F5E8 1435 aa9.93□□□□□ -0.82
SSBP2-210ENST00000508912 RAPGEF3O95398 923 aa9.92□□□□□ -0.82
SSBP2-210ENST00000508912 RGS17Q9UGC6 210 aaPredicted RBP9.92□□□□□ -0.82
SSBP2-210ENST00000508912 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
SSBP2-210ENST00000508912 POGZQ7Z3K3 1410 aa9.9□□□□□ -0.82
SSBP2-210ENST00000508912 PREX1Q8TCU6 1659 aa9.9□□□□□ -0.82
SSBP2-210ENST00000508912 KCNH8Q96L42 1107 aa9.89□□□□□ -0.83
SSBP2-210ENST00000508912 ZCCHC11Q5TAX3 1644 aaKnown RBP9.89□□□□□ -0.83
SSBP2-210ENST00000508912 UHRF1BP1Q6BDS2 1440 aa9.87□□□□□ -0.83
SSBP2-210ENST00000508912 TTC37Q6PGP7 1564 aa9.87□□□□□ -0.83
SSBP2-210ENST00000508912 SCAF1Q9H7N4 1312 aaKnown RBP9.84□□□□□ -0.83
SSBP2-210ENST00000508912 TOM1O60784 492 aa9.84□□□□□ -0.83
SSBP2-210ENST00000508912 PIP4K2BP78356 416 aa9.84□□□□□ -0.83
SSBP2-210ENST00000508912 FANCAO15360 1455 aa9.84□□□□□ -0.83
SSBP2-210ENST00000508912 SRCAPQ6ZRS2 3230 aa9.83□□□□□ -0.84
SSBP2-210ENST00000508912 ZNF335Q9H4Z2 1342 aaPredicted RBP9.82□□□□□ -0.84
SSBP2-210ENST00000508912 CEBPAP49715 358 aaPredicted RBP9.82□□□□□ -0.84
SSBP2-210ENST00000508912 EHMT2Q96KQ7 1210 aa9.81□□□□□ -0.84
SSBP2-210ENST00000508912 ARHGEF40Q8TER5 1519 aa9.81□□□□□ -0.84
SSBP2-210ENST00000508912 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
SSBP2-210ENST00000508912 NCOA1Q15788 1441 aa9.8□□□□□ -0.84
SSBP2-210ENST00000508912 NEO1Q92859 1461 aa9.79□□□□□ -0.84
SSBP2-210ENST00000508912 MLECQ14165 292 aa9.79□□□□□ -0.84
SSBP2-210ENST00000508912 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
SSBP2-210ENST00000508912 FRMPD1Q5SYB0 1578 aa9.79□□□□□ -0.84
SSBP2-210ENST00000508912 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
SSBP2-210ENST00000508912 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
SSBP2-210ENST00000508912 FER1L4A9Z1Z3 1794 aa9.77□□□□□ -0.85
SSBP2-210ENST00000508912 SETD1BQ9UPS6 1966 aaKnown RBP9.76□□□□□ -0.85
SSBP2-210ENST00000508912 DISP1Q96F81 1524 aa9.76□□□□□ -0.85
SSBP2-210ENST00000508912 ARHGEF12Q9NZN5 1544 aa9.75□□□□□ -0.85
SSBP2-210ENST00000508912 FHOD3Q2V2M9 1422 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms