RNA–Protein interactions for RNA: ENST00000508899.1

FREM3-202, Transcript of FRAS1 related extracellular matrix 3, humanhuman

TSL 5

Gene FREM3, Length 405 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3-202ENST00000508899 LOC105371045A0A1W2PR82 267 aa9.49□□□□□ -0.89
FREM3-202ENST00000508899 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
FREM3-202ENST00000508899 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
FREM3-202ENST00000508899 CREBZFQ9NS37 354 aa9.46□□□□□ -0.9
FREM3-202ENST00000508899 TRIM41Q8WV44 630 aa9.45□□□□□ -0.9
FREM3-202ENST00000508899 CCDC88BA6NC98 1476 aa9.43□□□□□ -0.9
FREM3-202ENST00000508899 WRNQ14191 1432 aaPredicted RBP eCLIP9.43□□□□□ -0.9
FREM3-202ENST00000508899 EEA1Q15075 1411 aa9.42□□□□□ -0.9
FREM3-202ENST00000508899 MNX1P50219 401 aaPredicted RBP9.39□□□□□ -0.91
FREM3-202ENST00000508899 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
FREM3-202ENST00000508899 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
FREM3-202ENST00000508899 KIF21BO75037 1637 aa9.36□□□□□ -0.91
FREM3-202ENST00000508899 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
FREM3-202ENST00000508899 EVX2Q03828 476 aa9.32□□□□□ -0.92
FREM3-202ENST00000508899 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
FREM3-202ENST00000508899 C19orf67A6NJJ6 358 aa9.31□□□□□ -0.92
FREM3-202ENST00000508899 TNIKQ9UKE5 1360 aa9.3□□□□□ -0.92
FREM3-202ENST00000508899 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
FREM3-202ENST00000508899 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
FREM3-202ENST00000508899 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
FREM3-202ENST00000508899 CEP162Q5TB80 1403 aa9.28□□□□□ -0.92
FREM3-202ENST00000508899 GOLGA3Q08378 1498 aa9.28□□□□□ -0.92
FREM3-202ENST00000508899 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
FREM3-202ENST00000508899 BAZ1BQ9UIG0 1483 aaKnown RBP9.27□□□□□ -0.93
FREM3-202ENST00000508899 HMGXB3Q12766 1538 aa9.26□□□□□ -0.93
FREM3-202ENST00000508899 HAX1O00165 279 aa9.26□□□□□ -0.93
FREM3-202ENST00000508899 VASPP50552 380 aaPredicted RBP9.26□□□□□ -0.93
FREM3-202ENST00000508899 MIER1Q8N108 512 aa9.26□□□□□ -0.93
FREM3-202ENST00000508899 PRDM2Q13029 1718 aa9.25□□□□□ -0.93
FREM3-202ENST00000508899 TOP2BQ02880 1626 aa9.25□□□□□ -0.93
FREM3-202ENST00000508899 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
FREM3-202ENST00000508899 SOGA1O94964 1423 aa9.23□□□□□ -0.93
FREM3-202ENST00000508899 PLCD3Q8N3E9 789 aa9.21□□□□□ -0.94
FREM3-202ENST00000508899 ERICH3Q5RHP9 1530 aa9.2□□□□□ -0.94
FREM3-202ENST00000508899 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
FREM3-202ENST00000508899 FAM9AQ8IZU1 332 aaPredicted RBP9.19□□□□□ -0.94
FREM3-202ENST00000508899 RUSC2Q8N2Y8 1516 aa9.19□□□□□ -0.94
FREM3-202ENST00000508899 SP7Q8TDD2 431 aaPredicted RBP9.18□□□□□ -0.94
FREM3-202ENST00000508899 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
FREM3-202ENST00000508899 NUBP1P53384 320 aa9.16□□□□□ -0.94
FREM3-202ENST00000508899 IFNLR1Q8IU57 520 aaPredicted RBP9.16□□□□□ -0.94
FREM3-202ENST00000508899 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
FREM3-202ENST00000508899 RASEFQ8IZ41 740 aa9.14□□□□□ -0.95
FREM3-202ENST00000508899 NCAPD3P42695 1498 aa9.14□□□□□ -0.95
FREM3-202ENST00000508899 VPS8Q8N3P4 1428 aa9.13□□□□□ -0.95
FREM3-202ENST00000508899 ZNF579Q8NAF0 562 aaKnown RBP9.11□□□□□ -0.95
FREM3-202ENST00000508899 ZBTB47Q9UFB7 747 aaPredicted RBP9.11□□□□□ -0.95
FREM3-202ENST00000508899 PRXQ9BXM0 1461 aa9.1□□□□□ -0.95
FREM3-202ENST00000508899 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
FREM3-202ENST00000508899 CCDC61Q9Y6R9 512 aa9.08□□□□□ -0.96
FREM3-202ENST00000508899 RAPGEF2Q9Y4G8 1499 aa9.08□□□□□ -0.96
FREM3-202ENST00000508899 CLIP1P30622 1438 aa9.07□□□□□ -0.96
FREM3-202ENST00000508899 CUX1P39880 1505 aa9.07□□□□□ -0.96
FREM3-202ENST00000508899 GABBR2O75899 941 aa9.06□□□□□ -0.96
FREM3-202ENST00000508899 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
FREM3-202ENST00000508899 CFTRP13569 1480 aa9.06□□□□□ -0.96
FREM3-202ENST00000508899 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
FREM3-202ENST00000508899 ARAP1Q96P48 1450 aa9.03□□□□□ -0.96
FREM3-202ENST00000508899 KLHL34Q8N239 644 aa9.03□□□□□ -0.96
FREM3-202ENST00000508899 PAK3O75914 559 aaPredicted RBP9.02□□□□□ -0.97
FREM3-202ENST00000508899 CUX2O14529 1486 aa9.02□□□□□ -0.97
FREM3-202ENST00000508899 SPOCK2Q92563 424 aa9□□□□□ -0.97
FREM3-202ENST00000508899 MAP3K1Q13233 1512 aa9□□□□□ -0.97
FREM3-202ENST00000508899 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
FREM3-202ENST00000508899 KIF12Q96FN5 646 aa8.99□□□□□ -0.97
FREM3-202ENST00000508899 FAM212AQ96EL1 285 aa8.98□□□□□ -0.97
FREM3-202ENST00000508899 CFAP43Q8NDM7 1665 aa8.97□□□□□ -0.97
FREM3-202ENST00000508899 CLCN6P51797 869 aa8.97□□□□□ -0.97
FREM3-202ENST00000508899 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
FREM3-202ENST00000508899 KIF27Q86VH2 1401 aa8.96□□□□□ -0.98
FREM3-202ENST00000508899 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
FREM3-202ENST00000508899 MS4A3Q96HJ5 214 aa8.95□□□□□ -0.98
FREM3-202ENST00000508899 MAP3K13O43283 966 aa8.94□□□□□ -0.98
FREM3-202ENST00000508899 DCAF8Q5TAQ9 597 aa8.94□□□□□ -0.98
FREM3-202ENST00000508899 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
FREM3-202ENST00000508899 CLSPNQ9HAW4 1339 aa8.94□□□□□ -0.98
FREM3-202ENST00000508899 UBTFP17480 764 aaKnown RBP8.93□□□□□ -0.98
FREM3-202ENST00000508899 ARHGAP35Q9NRY4 1499 aa8.93□□□□□ -0.98
FREM3-202ENST00000508899 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
FREM3-202ENST00000508899 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
FREM3-202ENST00000508899 TIAM1Q13009 1591 aa8.91□□□□□ -0.98
FREM3-202ENST00000508899 GSE1Q14687 1217 aa8.91□□□□□ -0.98
FREM3-202ENST00000508899 TRPC6Q9Y210 931 aa8.91□□□□□ -0.98
FREM3-202ENST00000508899 PELP1Q8IZL8 1130 aaKnown RBP8.9□□□□□ -0.98
FREM3-202ENST00000508899 CUL7Q14999 1698 aa8.89□□□□□ -0.99
FREM3-202ENST00000508899 PYGBP11216 843 aa8.89□□□□□ -0.99
FREM3-202ENST00000508899 DNMBPQ6XZF7 1577 aa8.89□□□□□ -0.99
FREM3-202ENST00000508899 CTTNBP2Q8WZ74 1663 aa8.88□□□□□ -0.99
FREM3-202ENST00000508899 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
FREM3-202ENST00000508899 EFCAB5A4FU69 1503 aa8.87□□□□□ -0.99
FREM3-202ENST00000508899 CHRM1P11229 460 aaPredicted RBP8.87□□□□□ -0.99
FREM3-202ENST00000508899 KIF21AQ7Z4S6 1674 aa8.86□□□□□ -0.99
FREM3-202ENST00000508899 FGD5Q6ZNL6 1462 aa8.86□□□□□ -0.99
FREM3-202ENST00000508899 IFNL1Q8IU54 200 aa8.86□□□□□ -0.99
FREM3-202ENST00000508899 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
FREM3-202ENST00000508899 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
FREM3-202ENST00000508899 PCDHB13Q9Y5F0 798 aa8.85□□□□□ -0.99
FREM3-202ENST00000508899 DHX57Q6P158 1386 aaKnown RBP8.85□□□□□ -0.99
FREM3-202ENST00000508899 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
FREM3-202ENST00000508899 ABCA10Q8WWZ4 1543 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms