RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ARID4BQ4LE39 1312 aaPredicted RBP5.8□□□□□ -1.48
NEDD4-209ENST00000508871 AEBP1Q8IUX7 1158 aa5.78□□□□□ -1.48
NEDD4-209ENST00000508871 WDR70Q9NW82 654 aa5.78□□□□□ -1.48
NEDD4-209ENST00000508871 CCDC88BA6NC98 1476 aa5.78□□□□□ -1.48
NEDD4-209ENST00000508871 PLCD3Q8N3E9 789 aa5.77□□□□□ -1.49
NEDD4-209ENST00000508871 BIVM-ERCC5R4GMW8 1640 aa5.77□□□□□ -1.49
NEDD4-209ENST00000508871 DCAF8L1A6NGE4 600 aa5.77□□□□□ -1.49
NEDD4-209ENST00000508871 TSHZ2Q9NRE2 1034 aa5.77□□□□□ -1.49
NEDD4-209ENST00000508871 PLEKHG5O94827 1062 aa5.76□□□□□ -1.49
NEDD4-209ENST00000508871 APLP2Q06481 763 aa5.76□□□□□ -1.49
NEDD4-209ENST00000508871 CNKSR2Q8WXI2 1034 aa5.76□□□□□ -1.49
NEDD4-209ENST00000508871 CC2D2AQ9P2K1 1620 aa5.76□□□□□ -1.49
NEDD4-209ENST00000508871 TRIM26Q12899 539 aaPredicted RBP5.75□□□□□ -1.49
NEDD4-209ENST00000508871 BBXQ8WY36 941 aaPredicted RBP5.75□□□□□ -1.49
NEDD4-209ENST00000508871 HSP90B1P14625 803 aaKnown RBP5.73□□□□□ -1.49
NEDD4-209ENST00000508871 UBTFP17480 764 aaKnown RBP5.73□□□□□ -1.49
NEDD4-209ENST00000508871 RBM25P49756 843 aaKnown RBP5.71□□□□□ -1.49
NEDD4-209ENST00000508871 TOP2BQ02880 1626 aa5.71□□□□□ -1.5
NEDD4-209ENST00000508871 RAD21O60216 631 aa5.71□□□□□ -1.5
NEDD4-209ENST00000508871 TRIM41Q8WV44 630 aa5.71□□□□□ -1.5
NEDD4-209ENST00000508871 KDM2AQ9Y2K7 1162 aa5.7□□□□□ -1.5
NEDD4-209ENST00000508871 PABPN1Q86U42 306 aaKnown RBP eCLIP5.7□□□□□ -1.5
NEDD4-209ENST00000508871 RSPH6AQ9H0K4 717 aa5.69□□□□□ -1.5
NEDD4-209ENST00000508871 LAMC3Q9Y6N6 1575 aa5.69□□□□□ -1.5
NEDD4-209ENST00000508871 EEA1Q15075 1411 aa5.69□□□□□ -1.5
NEDD4-209ENST00000508871 PPM1GO15355 546 aaPredicted RBP5.68□□□□□ -1.5
NEDD4-209ENST00000508871 VASPP50552 380 aaPredicted RBP5.68□□□□□ -1.5
NEDD4-209ENST00000508871 CFTRP13569 1480 aa5.68□□□□□ -1.5
NEDD4-209ENST00000508871 KCTD17Q8N5Z5 321 aa5.67□□□□□ -1.5
NEDD4-209ENST00000508871 KRI1Q8N9T8 703 aaKnown RBP5.67□□□□□ -1.5
NEDD4-209ENST00000508871 NEFLP07196 543 aa5.66□□□□□ -1.5
NEDD4-209ENST00000508871 KIF21BO75037 1637 aa5.66□□□□□ -1.5
NEDD4-209ENST00000508871 WDR97A6NE52 1622 aa5.65□□□□□ -1.5
NEDD4-209ENST00000508871 PPP1R1BQ9UD71 204 aaPredicted RBP5.65□□□□□ -1.5
NEDD4-209ENST00000508871 FBXW7Q969H0 707 aa5.65□□□□□ -1.51
NEDD4-209ENST00000508871 SYNJ1O43426 1573 aa5.64□□□□□ -1.51
NEDD4-209ENST00000508871 MYCNP04198 464 aaPredicted RBP5.64□□□□□ -1.51
NEDD4-209ENST00000508871 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
NEDD4-209ENST00000508871 APBB1O00213 710 aa5.64□□□□□ -1.51
NEDD4-209ENST00000508871 ABCC8Q09428 1581 aa5.63□□□□□ -1.51
NEDD4-209ENST00000508871 YTHDC1Q96MU7 727 aaKnown RBP5.63□□□□□ -1.51
NEDD4-209ENST00000508871 TMCO4Q5TGY1 634 aa5.63□□□□□ -1.51
NEDD4-209ENST00000508871 WRNQ14191 1432 aaPredicted RBP eCLIP5.62□□□□□ -1.51
NEDD4-209ENST00000508871 DNMBPQ6XZF7 1577 aa5.62□□□□□ -1.51
NEDD4-209ENST00000508871 CCDC97Q96F63 343 aaPredicted RBP5.61□□□□□ -1.51
NEDD4-209ENST00000508871 ERICH3Q5RHP9 1530 aa5.61□□□□□ -1.51
NEDD4-209ENST00000508871 SPDYE4A6NLX3 237 aa5.61□□□□□ -1.51
NEDD4-209ENST00000508871 MIER1Q8N108 512 aa5.6□□□□□ -1.51
NEDD4-209ENST00000508871 PTMSP20962 102 aa5.59□□□□□ -1.51
NEDD4-209ENST00000508871 CUX1P39880 1505 aa5.59□□□□□ -1.51
NEDD4-209ENST00000508871 CADPSQ9ULU8 1353 aa5.59□□□□□ -1.51
NEDD4-209ENST00000508871 SPOCK2Q92563 424 aa5.59□□□□□ -1.51
NEDD4-209ENST00000508871 CUL7Q14999 1698 aa5.58□□□□□ -1.52
NEDD4-209ENST00000508871 KIF21AQ7Z4S6 1674 aa5.58□□□□□ -1.52
NEDD4-209ENST00000508871 ARID3CA6NKF2 412 aa5.58□□□□□ -1.52
NEDD4-209ENST00000508871 P3H3Q8IVL6 736 aa5.57□□□□□ -1.52
NEDD4-209ENST00000508871 E9PSI1 815 aa5.57□□□□□ -1.52
NEDD4-209ENST00000508871 ZNF326Q5BKZ1 582 aaKnown RBP5.56□□□□□ -1.52
NEDD4-209ENST00000508871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.56□□□□□ -1.522e-6■■□□□ 14.1
NEDD4-209ENST00000508871 CEP164Q9UPV0 1460 aa5.55□□□□□ -1.52
NEDD4-209ENST00000508871 A0A0U1RQG5 324 aaPredicted RBP5.55□□□□□ -1.52
NEDD4-209ENST00000508871 LMOD2Q6P5Q4 547 aa5.55□□□□□ -1.52
NEDD4-209ENST00000508871 GOLGA3Q08378 1498 aa5.55□□□□□ -1.52
NEDD4-209ENST00000508871 FANCD2Q9BXW9 1451 aa5.55□□□□□ -1.52
NEDD4-209ENST00000508871 ATXN8OSP0DMR3 200 aa5.54□□□□□ -1.52
NEDD4-209ENST00000508871 CTTNBP2Q8WZ74 1663 aa5.54□□□□□ -1.52
NEDD4-209ENST00000508871 ABCA5Q8WWZ7 1642 aa5.54□□□□□ -1.52
NEDD4-209ENST00000508871 ZMYND15Q9H091 742 aa5.54□□□□□ -1.52
NEDD4-209ENST00000508871 PBRM1Q86U86 1689 aa5.54□□□□□ -1.52
NEDD4-209ENST00000508871 PDS5BQ9NTI5 1447 aa5.53□□□□□ -1.52
NEDD4-209ENST00000508871 WDR62O43379 1518 aa5.53□□□□□ -1.52
NEDD4-209ENST00000508871 IL27Q8NEV9 243 aa5.53□□□□□ -1.52
NEDD4-209ENST00000508871 ABCA10Q8WWZ4 1543 aa5.52□□□□□ -1.53
NEDD4-209ENST00000508871 TOPBP1Q92547 1522 aa5.52□□□□□ -1.53
NEDD4-209ENST00000508871 PSMD1Q99460 953 aa5.51□□□□□ -1.53
NEDD4-209ENST00000508871 TNIKQ9UKE5 1360 aa5.51□□□□□ -1.53
NEDD4-209ENST00000508871 THOC2Q8NI27 1593 aaKnown RBP5.51□□□□□ -1.53
NEDD4-209ENST00000508871 TARBP1Q13395 1621 aaKnown RBP5.51□□□□□ -1.53
NEDD4-209ENST00000508871 MRC2Q9UBG0 1479 aa5.5□□□□□ -1.53
NEDD4-209ENST00000508871 BCL11AQ9H165 835 aa5.5□□□□□ -1.53
NEDD4-209ENST00000508871 KIF27Q86VH2 1401 aa5.5□□□□□ -1.53
NEDD4-209ENST00000508871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.5□□□□□ -1.53
NEDD4-209ENST00000508871 BRD2P25440 801 aaKnown RBP5.5□□□□□ -1.53
NEDD4-209ENST00000508871 HNRNPUL2Q1KMD3 747 aaKnown RBP5.5□□□□□ -1.53
NEDD4-209ENST00000508871 FGD5Q6ZNL6 1462 aa5.49□□□□□ -1.53
NEDD4-209ENST00000508871 GZF1Q9H116 711 aaPredicted RBP5.49□□□□□ -1.53
NEDD4-209ENST00000508871 PRXQ9BXM0 1461 aa5.49□□□□□ -1.53
NEDD4-209ENST00000508871 CHMP4AQ9BY43 222 aa5.49□□□□□ -1.53
NEDD4-209ENST00000508871 STK25O00506 426 aa5.48□□□□□ -1.53
NEDD4-209ENST00000508871 URB2Q14146 1524 aaKnown RBP5.48□□□□□ -1.53
NEDD4-209ENST00000508871 PDE4CQ08493 712 aa5.47□□□□□ -1.53
NEDD4-209ENST00000508871 SOGA1O94964 1423 aa5.47□□□□□ -1.53
NEDD4-209ENST00000508871 FOXD4L5Q5VV16 416 aaPredicted RBP5.47□□□□□ -1.53
NEDD4-209ENST00000508871 FOXD4L4Q8WXT5 416 aaPredicted RBP5.47□□□□□ -1.53
NEDD4-209ENST00000508871 ACIN1Q9UKV3 1341 aaKnown RBP5.47□□□□□ -1.53
NEDD4-209ENST00000508871 EFCAB5A4FU69 1503 aa5.46□□□□□ -1.53
NEDD4-209ENST00000508871 POLA1P09884 1462 aaPredicted RBP5.46□□□□□ -1.54
NEDD4-209ENST00000508871 IFT140Q96RY7 1462 aa5.45□□□□□ -1.54
NEDD4-209ENST00000508871 ADAMTS12P58397 1594 aa5.45□□□□□ -1.54
NEDD4-209ENST00000508871 ZEB1P37275 1124 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms