RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
PTPN20-220ENST00000508715 KIAA0586Q9BVV6 1533 aa17.18■□□□□ 0.34
PTPN20-220ENST00000508715 CTTNBP2Q8WZ74 1663 aa17.17■□□□□ 0.34
PTPN20-220ENST00000508715 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
PTPN20-220ENST00000508715 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
PTPN20-220ENST00000508715 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
PTPN20-220ENST00000508715 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
PTPN20-220ENST00000508715 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
PTPN20-220ENST00000508715 IQGAP2Q13576 1575 aa17.12■□□□□ 0.33
PTPN20-220ENST00000508715 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
PTPN20-220ENST00000508715 GOLGA3Q08378 1498 aa17.08■□□□□ 0.32
PTPN20-220ENST00000508715 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
PTPN20-220ENST00000508715 PRG4Q92954 1404 aaPredicted RBP17.06■□□□□ 0.32
PTPN20-220ENST00000508715 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
PTPN20-220ENST00000508715 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
PTPN20-220ENST00000508715 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
PTPN20-220ENST00000508715 KIAA0556O60303 1618 aa16.99■□□□□ 0.31
PTPN20-220ENST00000508715 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
PTPN20-220ENST00000508715 UBTFP17480 764 aaKnown RBP16.98■□□□□ 0.31
PTPN20-220ENST00000508715 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
PTPN20-220ENST00000508715 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
PTPN20-220ENST00000508715 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
PTPN20-220ENST00000508715 CARMIL2Q6F5E8 1435 aa16.91■□□□□ 0.3
PTPN20-220ENST00000508715 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
PTPN20-220ENST00000508715 ARHGAP35Q9NRY4 1499 aa16.88■□□□□ 0.29
PTPN20-220ENST00000508715 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
PTPN20-220ENST00000508715 PTPRGP23470 1445 aa16.86■□□□□ 0.29
PTPN20-220ENST00000508715 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
PTPN20-220ENST00000508715 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
PTPN20-220ENST00000508715 ADCY10Q96PN6 1610 aa16.83■□□□□ 0.28
PTPN20-220ENST00000508715 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
PTPN20-220ENST00000508715 ABCA8O94911 1581 aa16.81■□□□□ 0.28
PTPN20-220ENST00000508715 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
PTPN20-220ENST00000508715 CLIP1P30622 1438 aa16.79■□□□□ 0.28
PTPN20-220ENST00000508715 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
PTPN20-220ENST00000508715 UACAQ9BZF9 1416 aa16.77■□□□□ 0.27
PTPN20-220ENST00000508715 ABCC2Q92887 1545 aa16.76■□□□□ 0.27
PTPN20-220ENST00000508715 UHRF1BP1LA0JNW5 1464 aa16.76■□□□□ 0.27
PTPN20-220ENST00000508715 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
PTPN20-220ENST00000508715 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
PTPN20-220ENST00000508715 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
PTPN20-220ENST00000508715 NUP153P49790 1475 aaKnown RBP16.69■□□□□ 0.26
PTPN20-220ENST00000508715 ZCCHC11Q5TAX3 1644 aaKnown RBP16.69■□□□□ 0.26
PTPN20-220ENST00000508715 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
PTPN20-220ENST00000508715 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
PTPN20-220ENST00000508715 ATP10BO94823 1461 aa16.65■□□□□ 0.26
PTPN20-220ENST00000508715 MAPKBP1O60336 1514 aa16.63■□□□□ 0.25
PTPN20-220ENST00000508715 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
PTPN20-220ENST00000508715 ARID3CA6NKF2 412 aa16.61■□□□□ 0.25
PTPN20-220ENST00000508715 HECW1Q76N89 1606 aa16.6■□□□□ 0.25
PTPN20-220ENST00000508715 KIF13AQ9H1H9 1805 aa16.6■□□□□ 0.25
PTPN20-220ENST00000508715 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
PTPN20-220ENST00000508715 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
PTPN20-220ENST00000508715 ASXL2Q76L83 1435 aa16.58■□□□□ 0.24
PTPN20-220ENST00000508715 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
PTPN20-220ENST00000508715 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPN20-220ENST00000508715 VPS8Q8N3P4 1428 aa16.56■□□□□ 0.24
PTPN20-220ENST00000508715 DIP2BQ9P265 1576 aa16.55■□□□□ 0.24
PTPN20-220ENST00000508715 ATP1B4Q9UN42 357 aaPredicted RBP16.52■□□□□ 0.24
PTPN20-220ENST00000508715 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.23
PTPN20-220ENST00000508715 WDR7Q9Y4E6 1490 aa16.52■□□□□ 0.23
PTPN20-220ENST00000508715 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
PTPN20-220ENST00000508715 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
PTPN20-220ENST00000508715 GLI2P10070 1586 aa16.47■□□□□ 0.23
PTPN20-220ENST00000508715 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
PTPN20-220ENST00000508715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
PTPN20-220ENST00000508715 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
PTPN20-220ENST00000508715 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
PTPN20-220ENST00000508715 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
PTPN20-220ENST00000508715 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
PTPN20-220ENST00000508715 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
PTPN20-220ENST00000508715 KIF14Q15058 1648 aa16.44■□□□□ 0.22
PTPN20-220ENST00000508715 MAP3K4Q9Y6R4 1608 aa16.44■□□□□ 0.22
PTPN20-220ENST00000508715 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
PTPN20-220ENST00000508715 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
PTPN20-220ENST00000508715 ABCA9Q8IUA7 1624 aa16.42■□□□□ 0.22
PTPN20-220ENST00000508715 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
PTPN20-220ENST00000508715 TROQ12816 1431 aaPredicted RBP16.42■□□□□ 0.22
PTPN20-220ENST00000508715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN20-220ENST00000508715 TTC37Q6PGP7 1564 aa16.4■□□□□ 0.22
PTPN20-220ENST00000508715 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
PTPN20-220ENST00000508715 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
PTPN20-220ENST00000508715 CDK11AQ9UQ88 783 aaPredicted RBP16.36■□□□□ 0.21
PTPN20-220ENST00000508715 LRRC9Q6ZRR7 1453 aa16.35■□□□□ 0.21
PTPN20-220ENST00000508715 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
PTPN20-220ENST00000508715 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
PTPN20-220ENST00000508715 CDC42BPAQ5VT25 1732 aa16.33■□□□□ 0.2
PTPN20-220ENST00000508715 CDC42BPBQ9Y5S2 1711 aa16.32■□□□□ 0.2
PTPN20-220ENST00000508715 MYO5CQ9NQX4 1742 aa16.31■□□□□ 0.2
PTPN20-220ENST00000508715 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
PTPN20-220ENST00000508715 SUPT6HQ7KZ85 1726 aaKnown RBP16.28■□□□□ 0.2
PTPN20-220ENST00000508715 PREX2Q70Z35 1606 aa16.27■□□□□ 0.2
PTPN20-220ENST00000508715 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
PTPN20-220ENST00000508715 PLCH2O75038 1416 aa16.27■□□□□ 0.19
PTPN20-220ENST00000508715 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
PTPN20-220ENST00000508715 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
PTPN20-220ENST00000508715 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
PTPN20-220ENST00000508715 TEX14Q8IWB6 1497 aa16.22■□□□□ 0.19
PTPN20-220ENST00000508715 APLP2Q06481 763 aa16.22■□□□□ 0.19
PTPN20-220ENST00000508715 FANCAO15360 1455 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms