RNA–Protein interactions for RNA: ENST00000508698.3

C4orf47-202, Transcript of chromosome 4 open reading frame 47, humanhuman

TSL 5

Gene C4orf47, Length 832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47-202ENST00000508698 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
C4orf47-202ENST00000508698 KIAA0586Q9BVV6 1533 aa23.43■■□□□ 1.34
C4orf47-202ENST00000508698 CSRNP3Q8WYN3 585 aa23.42■■□□□ 1.34
C4orf47-202ENST00000508698 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
C4orf47-202ENST00000508698 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
C4orf47-202ENST00000508698 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
C4orf47-202ENST00000508698 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
C4orf47-202ENST00000508698 KIF21BO75037 1637 aa23.31■■□□□ 1.32
C4orf47-202ENST00000508698 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
C4orf47-202ENST00000508698 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
C4orf47-202ENST00000508698 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
C4orf47-202ENST00000508698 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
C4orf47-202ENST00000508698 CARMIL2Q6F5E8 1435 aa23.22■■□□□ 1.31
C4orf47-202ENST00000508698 UGGT2Q9NYU1 1516 aa23.22■■□□□ 1.31
C4orf47-202ENST00000508698 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
C4orf47-202ENST00000508698 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
C4orf47-202ENST00000508698 DISP1Q96F81 1524 aa23.12■■□□□ 1.29
C4orf47-202ENST00000508698 TNIKQ9UKE5 1360 aa23.09■■□□□ 1.29
C4orf47-202ENST00000508698 PTPRGP23470 1445 aa23.05■■□□□ 1.28
C4orf47-202ENST00000508698 UBTFP17480 764 aaKnown RBP23.03■■□□□ 1.28
C4orf47-202ENST00000508698 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
C4orf47-202ENST00000508698 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
C4orf47-202ENST00000508698 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
C4orf47-202ENST00000508698 ADCY10Q96PN6 1610 aa22.94■■□□□ 1.26
C4orf47-202ENST00000508698 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
C4orf47-202ENST00000508698 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
C4orf47-202ENST00000508698 UHRF1BP1LA0JNW5 1464 aa22.91■■□□□ 1.26
C4orf47-202ENST00000508698 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
C4orf47-202ENST00000508698 NPM1P06748 294 aaKnown RBP eCLIP22.88■■□□□ 1.25
C4orf47-202ENST00000508698 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
C4orf47-202ENST00000508698 ABCA8O94911 1581 aa22.84■■□□□ 1.25
C4orf47-202ENST00000508698 P3H3Q8IVL6 736 aa22.83■■□□□ 1.25
C4orf47-202ENST00000508698 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
C4orf47-202ENST00000508698 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
C4orf47-202ENST00000508698 PLB1Q6P1J6 1458 aa22.82■■□□□ 1.24
C4orf47-202ENST00000508698 ARHGAP35Q9NRY4 1499 aa22.79■■□□□ 1.24
C4orf47-202ENST00000508698 KDM5BQ9UGL1 1544 aa22.78■■□□□ 1.24
C4orf47-202ENST00000508698 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
C4orf47-202ENST00000508698 FMN1Q68DA7 1419 aa22.75■■□□□ 1.23
C4orf47-202ENST00000508698 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
C4orf47-202ENST00000508698 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
C4orf47-202ENST00000508698 CLIP1P30622 1438 aa22.73■■□□□ 1.23
C4orf47-202ENST00000508698 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
C4orf47-202ENST00000508698 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
C4orf47-202ENST00000508698 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
C4orf47-202ENST00000508698 DIP2BQ9P265 1576 aa22.65■■□□□ 1.22
C4orf47-202ENST00000508698 NUP153P49790 1475 aaKnown RBP22.65■■□□□ 1.22
C4orf47-202ENST00000508698 HECW1Q76N89 1606 aa22.64■■□□□ 1.22
C4orf47-202ENST00000508698 KIF13AQ9H1H9 1805 aa22.64■■□□□ 1.21
C4orf47-202ENST00000508698 WDR7Q9Y4E6 1490 aa22.62■■□□□ 1.21
C4orf47-202ENST00000508698 ATP10BO94823 1461 aa22.6■■□□□ 1.21
C4orf47-202ENST00000508698 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
C4orf47-202ENST00000508698 GLI2P10070 1586 aa22.56■■□□□ 1.2
C4orf47-202ENST00000508698 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
C4orf47-202ENST00000508698 FAM69CQ0P6D2 419 aa22.55■■□□□ 1.2
C4orf47-202ENST00000508698 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
C4orf47-202ENST00000508698 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
C4orf47-202ENST00000508698 EPRSP07814 1512 aaKnown RBP22.54■■□□□ 1.2
C4orf47-202ENST00000508698 ARID3CA6NKF2 412 aa22.54■■□□□ 1.2
C4orf47-202ENST00000508698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
C4orf47-202ENST00000508698 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
C4orf47-202ENST00000508698 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
C4orf47-202ENST00000508698 CDK13Q14004 1512 aaKnown RBP22.49■■□□□ 1.19
C4orf47-202ENST00000508698 ATP1B4Q9UN42 357 aaPredicted RBP22.49■■□□□ 1.19
C4orf47-202ENST00000508698 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
C4orf47-202ENST00000508698 CFAP43Q8NDM7 1665 aa22.46■■□□□ 1.19
C4orf47-202ENST00000508698 PLEKHD1A6NEE1 506 aa22.45■■□□□ 1.18
C4orf47-202ENST00000508698 CDK11AQ9UQ88 783 aaPredicted RBP22.45■■□□□ 1.18
C4orf47-202ENST00000508698 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
C4orf47-202ENST00000508698 TSPOAP1O95153 1857 aa22.42■■□□□ 1.18
C4orf47-202ENST00000508698 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
C4orf47-202ENST00000508698 ABCA9Q8IUA7 1624 aa22.4■■□□□ 1.18
C4orf47-202ENST00000508698 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
C4orf47-202ENST00000508698 TEX14Q8IWB6 1497 aa22.39■■□□□ 1.17
C4orf47-202ENST00000508698 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
C4orf47-202ENST00000508698 PPRC1Q5VV67 1664 aaKnown RBP22.36■■□□□ 1.17
C4orf47-202ENST00000508698 TROQ12816 1431 aaPredicted RBP22.35■■□□□ 1.17
C4orf47-202ENST00000508698 KIF14Q15058 1648 aa22.35■■□□□ 1.17
C4orf47-202ENST00000508698 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
C4orf47-202ENST00000508698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.3■■□□□ 1.16
C4orf47-202ENST00000508698 TTC37Q6PGP7 1564 aa22.28■■□□□ 1.16
C4orf47-202ENST00000508698 KDM6BO15054 1643 aa22.26■■□□□ 1.15
C4orf47-202ENST00000508698 EHBP1L1Q8N3D4 1523 aa22.24■■□□□ 1.15
C4orf47-202ENST00000508698 TIAM1Q13009 1591 aa22.24■■□□□ 1.15
C4orf47-202ENST00000508698 CFAP74Q9C0B2 1584 aa22.24■■□□□ 1.15
C4orf47-202ENST00000508698 MTUS2Q5JR59 1369 aa22.24■■□□□ 1.15
C4orf47-202ENST00000508698 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
C4orf47-202ENST00000508698 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
C4orf47-202ENST00000508698 NEO1Q92859 1461 aa22.22■■□□□ 1.15
C4orf47-202ENST00000508698 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
C4orf47-202ENST00000508698 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
C4orf47-202ENST00000508698 PLCH2O75038 1416 aa22.17■■□□□ 1.14
C4orf47-202ENST00000508698 FANCAO15360 1455 aa22.16■■□□□ 1.14
C4orf47-202ENST00000508698 APLP2Q06481 763 aa22.15■■□□□ 1.14
C4orf47-202ENST00000508698 PREX2Q70Z35 1606 aa22.14■■□□□ 1.14
C4orf47-202ENST00000508698 SUPT6HQ7KZ85 1726 aaKnown RBP22.13■■□□□ 1.13
C4orf47-202ENST00000508698 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
C4orf47-202ENST00000508698 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
C4orf47-202ENST00000508698 CDC42BPAQ5VT25 1732 aa22.1■■□□□ 1.13
C4orf47-202ENST00000508698 AKNAQ7Z591 1439 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms