RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 JPH4Q96JJ6 628 aa24.55■■□□□ 1.52
SH3TC1-216ENST00000508641 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
SH3TC1-216ENST00000508641 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
SH3TC1-216ENST00000508641 KIAA0586Q9BVV6 1533 aa24.51■■□□□ 1.51
SH3TC1-216ENST00000508641 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
SH3TC1-216ENST00000508641 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
SH3TC1-216ENST00000508641 PRG4Q92954 1404 aaPredicted RBP24.48■■□□□ 1.51
SH3TC1-216ENST00000508641 EEA1Q15075 1411 aa24.46■■□□□ 1.51
SH3TC1-216ENST00000508641 PRXQ9BXM0 1461 aa24.45■■□□□ 1.51
SH3TC1-216ENST00000508641 IQGAP2Q13576 1575 aa24.37■■□□□ 1.49
SH3TC1-216ENST00000508641 CTTNBP2Q8WZ74 1663 aa24.3■■□□□ 1.48
SH3TC1-216ENST00000508641 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
SH3TC1-216ENST00000508641 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
SH3TC1-216ENST00000508641 CARMIL2Q6F5E8 1435 aa24.27■■□□□ 1.48
SH3TC1-216ENST00000508641 UGGT2Q9NYU1 1516 aa24.22■■□□□ 1.47
SH3TC1-216ENST00000508641 DISP1Q96F81 1524 aa24.21■■□□□ 1.47
SH3TC1-216ENST00000508641 KIF21BO75037 1637 aa24.21■■□□□ 1.47
SH3TC1-216ENST00000508641 PTPRGP23470 1445 aa24.19■■□□□ 1.46
SH3TC1-216ENST00000508641 TNIKQ9UKE5 1360 aa24.19■■□□□ 1.46
SH3TC1-216ENST00000508641 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
SH3TC1-216ENST00000508641 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
SH3TC1-216ENST00000508641 KIAA0556O60303 1618 aa24.13■■□□□ 1.45
SH3TC1-216ENST00000508641 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
SH3TC1-216ENST00000508641 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
SH3TC1-216ENST00000508641 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
SH3TC1-216ENST00000508641 NPM1P06748 294 aaKnown RBP eCLIP24.08■■□□□ 1.45
SH3TC1-216ENST00000508641 ADCY10Q96PN6 1610 aa24.06■■□□□ 1.44
SH3TC1-216ENST00000508641 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
SH3TC1-216ENST00000508641 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
SH3TC1-216ENST00000508641 UHRF1BP1LA0JNW5 1464 aa23.94■■□□□ 1.42
SH3TC1-216ENST00000508641 ABCC2Q92887 1545 aa23.94■■□□□ 1.42
SH3TC1-216ENST00000508641 PLB1Q6P1J6 1458 aa23.94■■□□□ 1.42
SH3TC1-216ENST00000508641 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
SH3TC1-216ENST00000508641 ABCA8O94911 1581 aa23.87■■□□□ 1.41
SH3TC1-216ENST00000508641 EFCAB5A4FU69 1503 aa23.87■■□□□ 1.41
SH3TC1-216ENST00000508641 MAPKBP1O60336 1514 aa23.86■■□□□ 1.41
SH3TC1-216ENST00000508641 KDM5BQ9UGL1 1544 aa23.84■■□□□ 1.41
SH3TC1-216ENST00000508641 ARID3CA6NKF2 412 aa23.84■■□□□ 1.41
SH3TC1-216ENST00000508641 FAM69CQ0P6D2 419 aa23.82■■□□□ 1.4
SH3TC1-216ENST00000508641 ZCCHC11Q5TAX3 1644 aaKnown RBP23.81■■□□□ 1.4
SH3TC1-216ENST00000508641 ASXL2Q76L83 1435 aa23.8■■□□□ 1.4
SH3TC1-216ENST00000508641 ARHGAP35Q9NRY4 1499 aa23.8■■□□□ 1.4
SH3TC1-216ENST00000508641 ABCC10Q5T3U5 1492 aa23.79■■□□□ 1.4
SH3TC1-216ENST00000508641 KIF13AQ9H1H9 1805 aa23.78■■□□□ 1.4
SH3TC1-216ENST00000508641 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
SH3TC1-216ENST00000508641 RAPGEF6Q8TEU7 1601 aa23.77■■□□□ 1.4
SH3TC1-216ENST00000508641 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
SH3TC1-216ENST00000508641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
SH3TC1-216ENST00000508641 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
SH3TC1-216ENST00000508641 ATP10BO94823 1461 aa23.71■■□□□ 1.39
SH3TC1-216ENST00000508641 CLIP1P30622 1438 aa23.7■■□□□ 1.38
SH3TC1-216ENST00000508641 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.38
SH3TC1-216ENST00000508641 KCNH8Q96L42 1107 aa23.69■■□□□ 1.38
SH3TC1-216ENST00000508641 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
SH3TC1-216ENST00000508641 FMN1Q68DA7 1419 aa23.68■■□□□ 1.38
SH3TC1-216ENST00000508641 WDR7Q9Y4E6 1490 aa23.66■■□□□ 1.38
SH3TC1-216ENST00000508641 EPRSP07814 1512 aaKnown RBP23.64■■□□□ 1.38
SH3TC1-216ENST00000508641 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
SH3TC1-216ENST00000508641 GLI2P10070 1586 aa23.6■■□□□ 1.37
SH3TC1-216ENST00000508641 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
SH3TC1-216ENST00000508641 PLEKHD1A6NEE1 506 aa23.56■■□□□ 1.36
SH3TC1-216ENST00000508641 CDK13Q14004 1512 aaKnown RBP23.55■■□□□ 1.36
SH3TC1-216ENST00000508641 HECW1Q76N89 1606 aa23.55■■□□□ 1.36
SH3TC1-216ENST00000508641 MAP3K4Q9Y6R4 1608 aa23.51■■□□□ 1.35
SH3TC1-216ENST00000508641 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
SH3TC1-216ENST00000508641 PCF11O94913 1555 aaKnown RBP23.5■■□□□ 1.35
SH3TC1-216ENST00000508641 CD109Q6YHK3 1445 aa23.48■■□□□ 1.35
SH3TC1-216ENST00000508641 PPRC1Q5VV67 1664 aaKnown RBP23.47■■□□□ 1.35
SH3TC1-216ENST00000508641 LRRIQ1Q96JM4 1722 aa23.45■■□□□ 1.34
SH3TC1-216ENST00000508641 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
SH3TC1-216ENST00000508641 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
SH3TC1-216ENST00000508641 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
SH3TC1-216ENST00000508641 TEX14Q8IWB6 1497 aa23.41■■□□□ 1.34
SH3TC1-216ENST00000508641 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
SH3TC1-216ENST00000508641 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
SH3TC1-216ENST00000508641 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
SH3TC1-216ENST00000508641 KDM6BO15054 1643 aa23.37■■□□□ 1.33
SH3TC1-216ENST00000508641 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.33
SH3TC1-216ENST00000508641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.33
SH3TC1-216ENST00000508641 TTC37Q6PGP7 1564 aa23.31■■□□□ 1.32
SH3TC1-216ENST00000508641 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
SH3TC1-216ENST00000508641 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
SH3TC1-216ENST00000508641 KIF14Q15058 1648 aa23.29■■□□□ 1.32
SH3TC1-216ENST00000508641 MTUS2Q5JR59 1369 aa23.22■■□□□ 1.31
SH3TC1-216ENST00000508641 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
SH3TC1-216ENST00000508641 NEO1Q92859 1461 aa23.21■■□□□ 1.31
SH3TC1-216ENST00000508641 FANCAO15360 1455 aa23.2■■□□□ 1.3
SH3TC1-216ENST00000508641 PLCH2O75038 1416 aa23.2■■□□□ 1.3
SH3TC1-216ENST00000508641 MYO5CQ9NQX4 1742 aa23.18■■□□□ 1.3
SH3TC1-216ENST00000508641 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
SH3TC1-216ENST00000508641 AKNAQ7Z591 1439 aa23.17■■□□□ 1.3
SH3TC1-216ENST00000508641 EFCAB2Q5VUJ9 269 aa23.17■■□□□ 1.3
SH3TC1-216ENST00000508641 RAPGEF3O95398 923 aa23.16■■□□□ 1.3
SH3TC1-216ENST00000508641 CFAP74Q9C0B2 1584 aa23.14■■□□□ 1.29
SH3TC1-216ENST00000508641 TIAM1Q13009 1591 aa23.13■■□□□ 1.29
SH3TC1-216ENST00000508641 ARHGAP5Q13017 1502 aa23.13■■□□□ 1.29
SH3TC1-216ENST00000508641 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
SH3TC1-216ENST00000508641 APLP2Q06481 763 aa23.1■■□□□ 1.29
SH3TC1-216ENST00000508641 CDC42BPBQ9Y5S2 1711 aa23.09■■□□□ 1.29
SH3TC1-216ENST00000508641 CCNB3Q8WWL7 1395 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms