RNA–Protein interactions for RNA: ENST00000508602.5

PTPN20-219, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-219ENST00000508602 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
PTPN20-219ENST00000508602 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
PTPN20-219ENST00000508602 WDR97A6NE52 1622 aa18.68■□□□□ 0.58
PTPN20-219ENST00000508602 KDM4FA0A1W2PPD8 638 aa18.66■□□□□ 0.58
PTPN20-219ENST00000508602 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
PTPN20-219ENST00000508602 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
PTPN20-219ENST00000508602 SOGA1O94964 1423 aa18.65■□□□□ 0.58
PTPN20-219ENST00000508602 KCNA4P22459 653 aa18.61■□□□□ 0.57
PTPN20-219ENST00000508602 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
PTPN20-219ENST00000508602 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
PTPN20-219ENST00000508602 FGD5Q6ZNL6 1462 aa18.54■□□□□ 0.56
PTPN20-219ENST00000508602 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
PTPN20-219ENST00000508602 KDM6BO15054 1643 aa18.46■□□□□ 0.55
PTPN20-219ENST00000508602 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
PTPN20-219ENST00000508602 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
PTPN20-219ENST00000508602 CUX1P39880 1505 aa18.41■□□□□ 0.54
PTPN20-219ENST00000508602 DIP2BQ9P265 1576 aa18.4■□□□□ 0.54
PTPN20-219ENST00000508602 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
PTPN20-219ENST00000508602 TSPOAP1O95153 1857 aa18.39■□□□□ 0.53
PTPN20-219ENST00000508602 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
PTPN20-219ENST00000508602 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
PTPN20-219ENST00000508602 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
PTPN20-219ENST00000508602 NUP160Q12769 1436 aa18.36■□□□□ 0.53
PTPN20-219ENST00000508602 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
PTPN20-219ENST00000508602 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
PTPN20-219ENST00000508602 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
PTPN20-219ENST00000508602 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
PTPN20-219ENST00000508602 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
PTPN20-219ENST00000508602 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
PTPN20-219ENST00000508602 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
PTPN20-219ENST00000508602 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
PTPN20-219ENST00000508602 NPM1P06748 294 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTPN20-219ENST00000508602 PPRC1Q5VV67 1664 aaKnown RBP18.15■□□□□ 0.5
PTPN20-219ENST00000508602 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
PTPN20-219ENST00000508602 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
PTPN20-219ENST00000508602 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
PTPN20-219ENST00000508602 CAPN15O75808 1086 aa18.09■□□□□ 0.49
PTPN20-219ENST00000508602 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
PTPN20-219ENST00000508602 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
PTPN20-219ENST00000508602 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
PTPN20-219ENST00000508602 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
PTPN20-219ENST00000508602 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
PTPN20-219ENST00000508602 GLI2P10070 1586 aa17.98■□□□□ 0.47
PTPN20-219ENST00000508602 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
PTPN20-219ENST00000508602 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
PTPN20-219ENST00000508602 DSG3P32926 999 aa17.93■□□□□ 0.46
PTPN20-219ENST00000508602 MAP3K4Q9Y6R4 1608 aa17.9■□□□□ 0.46
PTPN20-219ENST00000508602 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
PTPN20-219ENST00000508602 ASXL2Q76L83 1435 aa17.89■□□□□ 0.46
PTPN20-219ENST00000508602 CUL7Q14999 1698 aa17.89■□□□□ 0.45
PTPN20-219ENST00000508602 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
PTPN20-219ENST00000508602 SOCS7O14512 581 aa17.87■□□□□ 0.45
PTPN20-219ENST00000508602 PLB1Q6P1J6 1458 aa17.87■□□□□ 0.45
PTPN20-219ENST00000508602 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
PTPN20-219ENST00000508602 APLP2Q06481 763 aa17.83■□□□□ 0.44
PTPN20-219ENST00000508602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
PTPN20-219ENST00000508602 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
PTPN20-219ENST00000508602 KIAA0586Q9BVV6 1533 aa17.81■□□□□ 0.44
PTPN20-219ENST00000508602 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
PTPN20-219ENST00000508602 PTPRGP23470 1445 aa17.8■□□□□ 0.44
PTPN20-219ENST00000508602 KIF21BO75037 1637 aa17.8■□□□□ 0.44
PTPN20-219ENST00000508602 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
PTPN20-219ENST00000508602 DISP3Q9P2K9 1392 aa17.74■□□□□ 0.43
PTPN20-219ENST00000508602 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
PTPN20-219ENST00000508602 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
PTPN20-219ENST00000508602 UHRF1BP1LA0JNW5 1464 aa17.73■□□□□ 0.43
PTPN20-219ENST00000508602 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
PTPN20-219ENST00000508602 ADAMTSL3P82987 1691 aa17.7■□□□□ 0.42
PTPN20-219ENST00000508602 PTPRMP28827 1452 aa17.69■□□□□ 0.42
PTPN20-219ENST00000508602 PCF11O94913 1555 aaKnown RBP17.69■□□□□ 0.42
PTPN20-219ENST00000508602 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
PTPN20-219ENST00000508602 ZCCHC11Q5TAX3 1644 aaKnown RBP17.68■□□□□ 0.42
PTPN20-219ENST00000508602 ABCB7O75027 752 aa17.67■□□□□ 0.42
PTPN20-219ENST00000508602 KDM5BQ9UGL1 1544 aa17.67■□□□□ 0.42
PTPN20-219ENST00000508602 UACAQ9BZF9 1416 aa17.64■□□□□ 0.42
PTPN20-219ENST00000508602 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
PTPN20-219ENST00000508602 CERKQ8TCT0 537 aa17.6■□□□□ 0.41
PTPN20-219ENST00000508602 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
PTPN20-219ENST00000508602 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
PTPN20-219ENST00000508602 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
PTPN20-219ENST00000508602 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
PTPN20-219ENST00000508602 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
PTPN20-219ENST00000508602 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
PTPN20-219ENST00000508602 MADDQ8WXG6 1647 aa17.56■□□□□ 0.4
PTPN20-219ENST00000508602 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
PTPN20-219ENST00000508602 IGF1RP08069 1367 aa17.55■□□□□ 0.4
PTPN20-219ENST00000508602 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
PTPN20-219ENST00000508602 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
PTPN20-219ENST00000508602 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
PTPN20-219ENST00000508602 HSPA2P54652 639 aa17.5■□□□□ 0.39
PTPN20-219ENST00000508602 ARAP3Q8WWN8 1544 aa17.49■□□□□ 0.39
PTPN20-219ENST00000508602 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
PTPN20-219ENST00000508602 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
PTPN20-219ENST00000508602 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
PTPN20-219ENST00000508602 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
PTPN20-219ENST00000508602 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
PTPN20-219ENST00000508602 UGGT2Q9NYU1 1516 aa17.39■□□□□ 0.37
PTPN20-219ENST00000508602 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
PTPN20-219ENST00000508602 FRMPD1Q5SYB0 1578 aa17.36■□□□□ 0.37
PTPN20-219ENST00000508602 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms