RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
ATP2C1-214ENST00000508532 SENP3-EIF4A1A0A087X0R7 540 aa20.11■□□□□ 0.81
ATP2C1-214ENST00000508532 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
ATP2C1-214ENST00000508532 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
ATP2C1-214ENST00000508532 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.81
ATP2C1-214ENST00000508532 ANP32AP39687 249 aaKnown RBP20.08■□□□□ 0.8
ATP2C1-214ENST00000508532 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.8
ATP2C1-214ENST00000508532 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
ATP2C1-214ENST00000508532 KIF21BO75037 1637 aa20.05■□□□□ 0.8
ATP2C1-214ENST00000508532 PPP1R15AO75807 674 aaPredicted RBP20.02■□□□□ 0.8
ATP2C1-214ENST00000508532 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
ATP2C1-214ENST00000508532 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
ATP2C1-214ENST00000508532 CCDC136Q96JN2 1154 aa20.01■□□□□ 0.79
ATP2C1-214ENST00000508532 EIF4G2P78344 907 aaKnown RBP eCLIP20■□□□□ 0.79
ATP2C1-214ENST00000508532 PPP4R2Q9NY27 417 aa19.98■□□□□ 0.79
ATP2C1-214ENST00000508532 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
ATP2C1-214ENST00000508532 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
ATP2C1-214ENST00000508532 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
ATP2C1-214ENST00000508532 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
ATP2C1-214ENST00000508532 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
ATP2C1-214ENST00000508532 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
ATP2C1-214ENST00000508532 DEKP35659 375 aaKnown RBP19.9■□□□□ 0.78
ATP2C1-214ENST00000508532 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
ATP2C1-214ENST00000508532 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
ATP2C1-214ENST00000508532 CUX2O14529 1486 aa19.85■□□□□ 0.77
ATP2C1-214ENST00000508532 NOP58Q9Y2X3 529 aaKnown RBP19.85■□□□□ 0.77
ATP2C1-214ENST00000508532 CARMIL1Q5VZK9 1371 aa19.85■□□□□ 0.77
ATP2C1-214ENST00000508532 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
ATP2C1-214ENST00000508532 TMC1Q8TDI8 760 aa19.82■□□□□ 0.76
ATP2C1-214ENST00000508532 RRBP1Q9P2E9 1410 aaKnown RBP19.82■□□□□ 0.76
ATP2C1-214ENST00000508532 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
ATP2C1-214ENST00000508532 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
ATP2C1-214ENST00000508532 FOXD1Q16676 465 aa19.77■□□□□ 0.75
ATP2C1-214ENST00000508532 ZNF777Q9ULD5 760 aaPredicted RBP19.75■□□□□ 0.75
ATP2C1-214ENST00000508532 ARHGAP35Q9NRY4 1499 aa19.75■□□□□ 0.75
ATP2C1-214ENST00000508532 PHLDB1Q86UU1 1377 aa19.75■□□□□ 0.75
ATP2C1-214ENST00000508532 MSH5O43196 834 aa19.75■□□□□ 0.75
ATP2C1-214ENST00000508532 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
ATP2C1-214ENST00000508532 RTN4Q9NQC3 1192 aaKnown RBP19.74■□□□□ 0.75
ATP2C1-214ENST00000508532 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
ATP2C1-214ENST00000508532 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
ATP2C1-214ENST00000508532 UNC13AQ9UPW8 1703 aa19.7■□□□□ 0.74
ATP2C1-214ENST00000508532 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
ATP2C1-214ENST00000508532 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
ATP2C1-214ENST00000508532 ERICH6BQ5W0A0 696 aa19.68■□□□□ 0.74
ATP2C1-214ENST00000508532 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
ATP2C1-214ENST00000508532 KDM2AQ9Y2K7 1162 aa19.66■□□□□ 0.74
ATP2C1-214ENST00000508532 EIF5BO60841 1220 aaKnown RBP19.65■□□□□ 0.74
ATP2C1-214ENST00000508532 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
ATP2C1-214ENST00000508532 L3MBTL2Q969R5 705 aa19.63■□□□□ 0.73
ATP2C1-214ENST00000508532 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
ATP2C1-214ENST00000508532 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
ATP2C1-214ENST00000508532 NEFMP07197 916 aa19.59■□□□□ 0.73
ATP2C1-214ENST00000508532 LRRC9Q6ZRR7 1453 aa19.59■□□□□ 0.73
ATP2C1-214ENST00000508532 IGF1RP08069 1367 aa19.59■□□□□ 0.73
ATP2C1-214ENST00000508532 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
ATP2C1-214ENST00000508532 WASHC2AQ641Q2 1341 aa19.57■□□□□ 0.72
ATP2C1-214ENST00000508532 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
ATP2C1-214ENST00000508532 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
ATP2C1-214ENST00000508532 IPO9Q96P70 1041 aaKnown RBP19.53■□□□□ 0.72
ATP2C1-214ENST00000508532 FMN1Q68DA7 1419 aa19.52■□□□□ 0.72
ATP2C1-214ENST00000508532 TOP2BQ02880 1626 aa19.52■□□□□ 0.71
ATP2C1-214ENST00000508532 PAK3O75914 559 aaPredicted RBP19.5■□□□□ 0.71
ATP2C1-214ENST00000508532 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
ATP2C1-214ENST00000508532 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
ATP2C1-214ENST00000508532 MAPKBP1O60336 1514 aa19.49■□□□□ 0.71
ATP2C1-214ENST00000508532 FBLN2P98095 1184 aa19.48■□□□□ 0.71
ATP2C1-214ENST00000508532 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
ATP2C1-214ENST00000508532 FGD6Q6ZV73 1430 aa19.44■□□□□ 0.7
ATP2C1-214ENST00000508532 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
ATP2C1-214ENST00000508532 TIAM1Q13009 1591 aa19.43■□□□□ 0.7
ATP2C1-214ENST00000508532 CUX1P39880 1505 aa19.41■□□□□ 0.7
ATP2C1-214ENST00000508532 PPM1GO15355 546 aaPredicted RBP19.41■□□□□ 0.7
ATP2C1-214ENST00000508532 ARXQ96QS3 562 aa19.4■□□□□ 0.7
ATP2C1-214ENST00000508532 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
ATP2C1-214ENST00000508532 RGL3Q3MIN7 710 aa19.39■□□□□ 0.69
ATP2C1-214ENST00000508532 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.38■□□□□ 0.69
ATP2C1-214ENST00000508532 CCDC7Q96M83 1385 aa19.38■□□□□ 0.69
ATP2C1-214ENST00000508532 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
ATP2C1-214ENST00000508532 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
ATP2C1-214ENST00000508532 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
ATP2C1-214ENST00000508532 RCAN3Q9UKA8 241 aa19.36■□□□□ 0.69
ATP2C1-214ENST00000508532 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
ATP2C1-214ENST00000508532 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
ATP2C1-214ENST00000508532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
ATP2C1-214ENST00000508532 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
ATP2C1-214ENST00000508532 AKNAQ7Z591 1439 aa19.33■□□□□ 0.69
ATP2C1-214ENST00000508532 C11orf95C9JLR9 678 aaPredicted RBP19.33■□□□□ 0.69
ATP2C1-214ENST00000508532 CC2D1BQ5T0F9 858 aaKnown RBP19.33■□□□□ 0.69
ATP2C1-214ENST00000508532 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
ATP2C1-214ENST00000508532 RGS3P49796 1198 aa19.33■□□□□ 0.68
ATP2C1-214ENST00000508532 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
ATP2C1-214ENST00000508532 PKD2Q13563 968 aa19.32■□□□□ 0.68
ATP2C1-214ENST00000508532 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
ATP2C1-214ENST00000508532 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
ATP2C1-214ENST00000508532 DCAF11Q8TEB1 546 aa19.3■□□□□ 0.68
ATP2C1-214ENST00000508532 TSPY4P0CV99 314 aa19.3■□□□□ 0.68
ATP2C1-214ENST00000508532 TSPY10P0CW01 314 aa19.3■□□□□ 0.68
ATP2C1-214ENST00000508532 WDR43Q15061 677 aaKnown RBP eCLIP19.3■□□□□ 0.68
ATP2C1-214ENST00000508532 PDE4AP27815 886 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms