RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
UBE2D3-221ENST00000507845 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
UBE2D3-221ENST00000507845 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
UBE2D3-221ENST00000507845 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
UBE2D3-221ENST00000507845 NUP160Q12769 1436 aa22.29■■□□□ 1.16
UBE2D3-221ENST00000507845 KIF21BO75037 1637 aa22.28■■□□□ 1.16
UBE2D3-221ENST00000507845 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
UBE2D3-221ENST00000507845 CTTNBP2Q8WZ74 1663 aa22.18■■□□□ 1.14
UBE2D3-221ENST00000507845 KIAA0586Q9BVV6 1533 aa22.15■■□□□ 1.14
UBE2D3-221ENST00000507845 GOLGA3Q08378 1498 aa22.14■■□□□ 1.13
UBE2D3-221ENST00000507845 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
UBE2D3-221ENST00000507845 IQGAP2Q13576 1575 aa22.11■■□□□ 1.13
UBE2D3-221ENST00000507845 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.13
UBE2D3-221ENST00000507845 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
UBE2D3-221ENST00000507845 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
UBE2D3-221ENST00000507845 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
UBE2D3-221ENST00000507845 ARHGEF11O15085 1522 aa22■■□□□ 1.11
UBE2D3-221ENST00000507845 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
UBE2D3-221ENST00000507845 RIMBP3CA6NJZ7 1639 aa21.99■■□□□ 1.11
UBE2D3-221ENST00000507845 RIMBP3BA6NNM3 1639 aa21.99■■□□□ 1.11
UBE2D3-221ENST00000507845 RIMBP3Q9UFD9 1639 aa21.99■■□□□ 1.11
UBE2D3-221ENST00000507845 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
UBE2D3-221ENST00000507845 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-221ENST00000507845 DISP1Q96F81 1524 aa21.92■■□□□ 1.1
UBE2D3-221ENST00000507845 TNIKQ9UKE5 1360 aa21.91■■□□□ 1.1
UBE2D3-221ENST00000507845 LOC105371045A0A1W2PR82 267 aa21.91■■□□□ 1.1
UBE2D3-221ENST00000507845 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
UBE2D3-221ENST00000507845 SAMD9Q5K651 1589 aa21.88■■□□□ 1.09
UBE2D3-221ENST00000507845 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
UBE2D3-221ENST00000507845 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
UBE2D3-221ENST00000507845 RANGAP1P46060 587 aaPredicted RBP21.83■■□□□ 1.09
UBE2D3-221ENST00000507845 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.09
UBE2D3-221ENST00000507845 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.08
UBE2D3-221ENST00000507845 P3H3Q8IVL6 736 aa21.75■■□□□ 1.07
UBE2D3-221ENST00000507845 PTPRGP23470 1445 aa21.74■■□□□ 1.07
UBE2D3-221ENST00000507845 CLIP1P30622 1438 aa21.73■■□□□ 1.07
UBE2D3-221ENST00000507845 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
UBE2D3-221ENST00000507845 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
UBE2D3-221ENST00000507845 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
UBE2D3-221ENST00000507845 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
UBE2D3-221ENST00000507845 ADCY10Q96PN6 1610 aa21.64■■□□□ 1.05
UBE2D3-221ENST00000507845 ABCA8O94911 1581 aa21.64■■□□□ 1.05
UBE2D3-221ENST00000507845 PLB1Q6P1J6 1458 aa21.62■■□□□ 1.05
UBE2D3-221ENST00000507845 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
UBE2D3-221ENST00000507845 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
UBE2D3-221ENST00000507845 UHRF1BP1LA0JNW5 1464 aa21.6■■□□□ 1.05
UBE2D3-221ENST00000507845 RAPGEF6Q8TEU7 1601 aa21.59■■□□□ 1.05
UBE2D3-221ENST00000507845 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
UBE2D3-221ENST00000507845 POTEDQ86YR6 584 aa21.55■■□□□ 1.04
UBE2D3-221ENST00000507845 PCF11O94913 1555 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-221ENST00000507845 NUP153P49790 1475 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-221ENST00000507845 KDM5BQ9UGL1 1544 aa21.5■■□□□ 1.03
UBE2D3-221ENST00000507845 ZCCHC11Q5TAX3 1644 aaKnown RBP21.49■■□□□ 1.03
UBE2D3-221ENST00000507845 HECW1Q76N89 1606 aa21.49■■□□□ 1.03
UBE2D3-221ENST00000507845 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
UBE2D3-221ENST00000507845 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
UBE2D3-221ENST00000507845 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.03
UBE2D3-221ENST00000507845 VPS8Q8N3P4 1428 aa21.45■■□□□ 1.02
UBE2D3-221ENST00000507845 ATP10BO94823 1461 aa21.44■■□□□ 1.02
UBE2D3-221ENST00000507845 NPM1P06748 294 aaKnown RBP eCLIP21.43■■□□□ 1.02
UBE2D3-221ENST00000507845 MAPKBP1O60336 1514 aa21.41■■□□□ 1.02
UBE2D3-221ENST00000507845 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-221ENST00000507845 ARID3CA6NKF2 412 aa21.4■■□□□ 1.02
UBE2D3-221ENST00000507845 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.02
UBE2D3-221ENST00000507845 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
UBE2D3-221ENST00000507845 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
UBE2D3-221ENST00000507845 ASXL2Q76L83 1435 aa21.35■■□□□ 1.01
UBE2D3-221ENST00000507845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.31■■□□□ 1
UBE2D3-221ENST00000507845 HNRNPUL2Q1KMD3 747 aaKnown RBP21.31■■□□□ 1
UBE2D3-221ENST00000507845 CFAP43Q8NDM7 1665 aa21.31■■□□□ 1
UBE2D3-221ENST00000507845 WDR7Q9Y4E6 1490 aa21.3■■□□□ 1
UBE2D3-221ENST00000507845 KIF13AQ9H1H9 1805 aa21.27■■□□□ 1
UBE2D3-221ENST00000507845 TIAM1Q13009 1591 aa21.26■□□□□ 0.99
UBE2D3-221ENST00000507845 DIP2BQ9P265 1576 aa21.26■□□□□ 0.99
UBE2D3-221ENST00000507845 ABCC10Q5T3U5 1492 aa21.25■□□□□ 0.99
UBE2D3-221ENST00000507845 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
UBE2D3-221ENST00000507845 MAP3K1Q13233 1512 aa21.24■□□□□ 0.99
UBE2D3-221ENST00000507845 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
UBE2D3-221ENST00000507845 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
UBE2D3-221ENST00000507845 TROQ12816 1431 aaPredicted RBP21.21■□□□□ 0.99
UBE2D3-221ENST00000507845 GLI2P10070 1586 aa21.2■□□□□ 0.98
UBE2D3-221ENST00000507845 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
UBE2D3-221ENST00000507845 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
UBE2D3-221ENST00000507845 KIF14Q15058 1648 aa21.17■□□□□ 0.98
UBE2D3-221ENST00000507845 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
UBE2D3-221ENST00000507845 ABCA9Q8IUA7 1624 aa21.15■□□□□ 0.98
UBE2D3-221ENST00000507845 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
UBE2D3-221ENST00000507845 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
UBE2D3-221ENST00000507845 MAP3K4Q9Y6R4 1608 aa21.15■□□□□ 0.98
UBE2D3-221ENST00000507845 MTUS2Q5JR59 1369 aa21.14■□□□□ 0.98
UBE2D3-221ENST00000507845 LRRC9Q6ZRR7 1453 aa21.13■□□□□ 0.97
UBE2D3-221ENST00000507845 APLP2Q06481 763 aa21.13■□□□□ 0.97
UBE2D3-221ENST00000507845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
UBE2D3-221ENST00000507845 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
UBE2D3-221ENST00000507845 TSPOAP1O95153 1857 aa21.11■□□□□ 0.97
UBE2D3-221ENST00000507845 KANK4Q5T7N3 995 aaPredicted RBP21.1■□□□□ 0.97
UBE2D3-221ENST00000507845 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
UBE2D3-221ENST00000507845 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
UBE2D3-221ENST00000507845 PPRC1Q5VV67 1664 aaKnown RBP21.08■□□□□ 0.96
UBE2D3-221ENST00000507845 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms