RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
TRIM6-209ENST00000507320 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
TRIM6-209ENST00000507320 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
TRIM6-209ENST00000507320 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
TRIM6-209ENST00000507320 KIAA0586Q9BVV6 1533 aa17.41■□□□□ 0.38
TRIM6-209ENST00000507320 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
TRIM6-209ENST00000507320 JPH4Q96JJ6 628 aa17.33■□□□□ 0.37
TRIM6-209ENST00000507320 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
TRIM6-209ENST00000507320 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
TRIM6-209ENST00000507320 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
TRIM6-209ENST00000507320 UGGT2Q9NYU1 1516 aa17.29■□□□□ 0.36
TRIM6-209ENST00000507320 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
TRIM6-209ENST00000507320 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.36
TRIM6-209ENST00000507320 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
TRIM6-209ENST00000507320 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
TRIM6-209ENST00000507320 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
TRIM6-209ENST00000507320 SAMD9Q5K651 1589 aa17.22■□□□□ 0.35
TRIM6-209ENST00000507320 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
TRIM6-209ENST00000507320 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
TRIM6-209ENST00000507320 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
TRIM6-209ENST00000507320 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
TRIM6-209ENST00000507320 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
TRIM6-209ENST00000507320 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
TRIM6-209ENST00000507320 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
TRIM6-209ENST00000507320 CLIP1P30622 1438 aa17.19■□□□□ 0.34
TRIM6-209ENST00000507320 CARMIL2Q6F5E8 1435 aa17.19■□□□□ 0.34
TRIM6-209ENST00000507320 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
TRIM6-209ENST00000507320 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
TRIM6-209ENST00000507320 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
TRIM6-209ENST00000507320 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
TRIM6-209ENST00000507320 PTPRGP23470 1445 aa17.1■□□□□ 0.33
TRIM6-209ENST00000507320 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
TRIM6-209ENST00000507320 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
TRIM6-209ENST00000507320 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
TRIM6-209ENST00000507320 ABCA8O94911 1581 aa17■□□□□ 0.31
TRIM6-209ENST00000507320 UACAQ9BZF9 1416 aa16.99■□□□□ 0.31
TRIM6-209ENST00000507320 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
TRIM6-209ENST00000507320 RAPGEF6Q8TEU7 1601 aa16.98■□□□□ 0.31
TRIM6-209ENST00000507320 PCF11O94913 1555 aaKnown RBP16.97■□□□□ 0.31
TRIM6-209ENST00000507320 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
TRIM6-209ENST00000507320 ABCC2Q92887 1545 aa16.96■□□□□ 0.31
TRIM6-209ENST00000507320 UHRF1BP1LA0JNW5 1464 aa16.94■□□□□ 0.3
TRIM6-209ENST00000507320 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
TRIM6-209ENST00000507320 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
TRIM6-209ENST00000507320 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
TRIM6-209ENST00000507320 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
TRIM6-209ENST00000507320 LRRIQ1Q96JM4 1722 aa16.92■□□□□ 0.3
TRIM6-209ENST00000507320 FYCO1Q9BQS8 1478 aa16.91■□□□□ 0.3
TRIM6-209ENST00000507320 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
TRIM6-209ENST00000507320 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
TRIM6-209ENST00000507320 ATP10BO94823 1461 aa16.88■□□□□ 0.29
TRIM6-209ENST00000507320 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
TRIM6-209ENST00000507320 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
TRIM6-209ENST00000507320 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
TRIM6-209ENST00000507320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
TRIM6-209ENST00000507320 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRIM6-209ENST00000507320 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
TRIM6-209ENST00000507320 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
TRIM6-209ENST00000507320 TIAM1Q13009 1591 aa16.78■□□□□ 0.28
TRIM6-209ENST00000507320 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
TRIM6-209ENST00000507320 ASXL2Q76L83 1435 aa16.77■□□□□ 0.28
TRIM6-209ENST00000507320 MAPKBP1O60336 1514 aa16.77■□□□□ 0.27
TRIM6-209ENST00000507320 MAGI3Q5TCQ9 1506 aa16.77■□□□□ 0.27
TRIM6-209ENST00000507320 MAP3K1Q13233 1512 aa16.74■□□□□ 0.27
TRIM6-209ENST00000507320 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
TRIM6-209ENST00000507320 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
TRIM6-209ENST00000507320 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
TRIM6-209ENST00000507320 APLP2Q06481 763 aa16.72■□□□□ 0.27
TRIM6-209ENST00000507320 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
TRIM6-209ENST00000507320 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
TRIM6-209ENST00000507320 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
TRIM6-209ENST00000507320 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
TRIM6-209ENST00000507320 MTUS2Q5JR59 1369 aa16.69■□□□□ 0.26
TRIM6-209ENST00000507320 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
TRIM6-209ENST00000507320 KIF14Q15058 1648 aa16.68■□□□□ 0.26
TRIM6-209ENST00000507320 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
TRIM6-209ENST00000507320 DIP2BQ9P265 1576 aa16.65■□□□□ 0.26
TRIM6-209ENST00000507320 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
TRIM6-209ENST00000507320 KIF13AQ9H1H9 1805 aa16.64■□□□□ 0.25
TRIM6-209ENST00000507320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRIM6-209ENST00000507320 TTC37Q6PGP7 1564 aa16.62■□□□□ 0.25
TRIM6-209ENST00000507320 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
TRIM6-209ENST00000507320 SUPT6HQ7KZ85 1726 aaKnown RBP16.6■□□□□ 0.25
TRIM6-209ENST00000507320 ABCA9Q8IUA7 1624 aa16.6■□□□□ 0.25
TRIM6-209ENST00000507320 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
TRIM6-209ENST00000507320 GLI2P10070 1586 aa16.6■□□□□ 0.25
TRIM6-209ENST00000507320 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
TRIM6-209ENST00000507320 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
TRIM6-209ENST00000507320 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
TRIM6-209ENST00000507320 TSPOAP1O95153 1857 aa16.54■□□□□ 0.24
TRIM6-209ENST00000507320 PHLDB1Q86UU1 1377 aa16.54■□□□□ 0.24
TRIM6-209ENST00000507320 CD109Q6YHK3 1445 aa16.54■□□□□ 0.24
TRIM6-209ENST00000507320 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
TRIM6-209ENST00000507320 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
TRIM6-209ENST00000507320 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.23
TRIM6-209ENST00000507320 CDC42BPBQ9Y5S2 1711 aa16.52■□□□□ 0.23
TRIM6-209ENST00000507320 PPRC1Q5VV67 1664 aaKnown RBP16.51■□□□□ 0.23
TRIM6-209ENST00000507320 PREX2Q70Z35 1606 aa16.51■□□□□ 0.23
TRIM6-209ENST00000507320 PLCH2O75038 1416 aa16.5■□□□□ 0.23
TRIM6-209ENST00000507320 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms