RNA–Protein interactions for RNA: ENST00000507313.5

LINC00939-202, long intergenic non-protein coding RNA 939, humanhuman

TSL 2 BASIC

Gene LINC00939, Length 2,819 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-202ENST00000507313 CHD1O14646 1710 aa14.23□□□□□ -0.13
LINC00939-202ENST00000507313 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
LINC00939-202ENST00000507313 EEA1Q15075 1411 aa14.21□□□□□ -0.13
LINC00939-202ENST00000507313 NUP160Q12769 1436 aa14.21□□□□□ -0.14
LINC00939-202ENST00000507313 PRXQ9BXM0 1461 aa14.19□□□□□ -0.14
LINC00939-202ENST00000507313 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
LINC00939-202ENST00000507313 P3H3Q8IVL6 736 aa14.15□□□□□ -0.14
LINC00939-202ENST00000507313 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
LINC00939-202ENST00000507313 CUL7Q14999 1698 aa14.15□□□□□ -0.14
LINC00939-202ENST00000507313 KIAA0586Q9BVV6 1533 aa14.14□□□□□ -0.15
LINC00939-202ENST00000507313 PRG4Q92954 1404 aaPredicted RBP14.14□□□□□ -0.15
LINC00939-202ENST00000507313 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
LINC00939-202ENST00000507313 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
LINC00939-202ENST00000507313 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.16
LINC00939-202ENST00000507313 ERCC6L2Q5T890 1561 aa14.07□□□□□ -0.16
LINC00939-202ENST00000507313 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
LINC00939-202ENST00000507313 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
LINC00939-202ENST00000507313 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
LINC00939-202ENST00000507313 ARAP1Q96P48 1450 aa14.04□□□□□ -0.16
LINC00939-202ENST00000507313 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
LINC00939-202ENST00000507313 GOLGA3Q08378 1498 aa14.02□□□□□ -0.16
LINC00939-202ENST00000507313 PTPRGP23470 1445 aa14.02□□□□□ -0.16
LINC00939-202ENST00000507313 IQGAP2Q13576 1575 aa14.01□□□□□ -0.17
LINC00939-202ENST00000507313 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
LINC00939-202ENST00000507313 MYT1Q01538 1121 aa13.99□□□□□ -0.17
LINC00939-202ENST00000507313 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
LINC00939-202ENST00000507313 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC00939-202ENST00000507313 ATP1B4Q9UN42 357 aaPredicted RBP13.96□□□□□ -0.17
LINC00939-202ENST00000507313 KIF21BO75037 1637 aa13.96□□□□□ -0.17
LINC00939-202ENST00000507313 DISP1Q96F81 1524 aa13.96□□□□□ -0.17
LINC00939-202ENST00000507313 SHROOM2Q13796 1616 aa13.95□□□□□ -0.18
LINC00939-202ENST00000507313 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
LINC00939-202ENST00000507313 UGGT2Q9NYU1 1516 aa13.94□□□□□ -0.18
LINC00939-202ENST00000507313 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
LINC00939-202ENST00000507313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
LINC00939-202ENST00000507313 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
LINC00939-202ENST00000507313 TRIM26Q12899 539 aaPredicted RBP13.89□□□□□ -0.19
LINC00939-202ENST00000507313 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
LINC00939-202ENST00000507313 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
LINC00939-202ENST00000507313 UACAQ9BZF9 1416 aa13.87□□□□□ -0.19
LINC00939-202ENST00000507313 CTTNBP2Q8WZ74 1663 aa13.86□□□□□ -0.19
LINC00939-202ENST00000507313 CLIP1P30622 1438 aa13.86□□□□□ -0.19
LINC00939-202ENST00000507313 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
LINC00939-202ENST00000507313 ARHGAP35Q9NRY4 1499 aa13.84□□□□□ -0.19
LINC00939-202ENST00000507313 KCNH8Q96L42 1107 aa13.83□□□□□ -0.2
LINC00939-202ENST00000507313 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
LINC00939-202ENST00000507313 FAM69CQ0P6D2 419 aa13.8□□□□□ -0.2
LINC00939-202ENST00000507313 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
LINC00939-202ENST00000507313 APLP2Q06481 763 aa13.77□□□□□ -0.21
LINC00939-202ENST00000507313 SAMD9Q5K651 1589 aa13.76□□□□□ -0.21
LINC00939-202ENST00000507313 ABCC2Q92887 1545 aa13.75□□□□□ -0.21
LINC00939-202ENST00000507313 ADCY10Q96PN6 1610 aa13.75□□□□□ -0.21
LINC00939-202ENST00000507313 EFCAB5A4FU69 1503 aa13.75□□□□□ -0.21
LINC00939-202ENST00000507313 FMN1Q68DA7 1419 aa13.75□□□□□ -0.21
LINC00939-202ENST00000507313 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
LINC00939-202ENST00000507313 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
LINC00939-202ENST00000507313 UHRF1BP1LA0JNW5 1464 aa13.73□□□□□ -0.21
LINC00939-202ENST00000507313 ATP10BO94823 1461 aa13.72□□□□□ -0.21
LINC00939-202ENST00000507313 ASXL2Q76L83 1435 aa13.72□□□□□ -0.21
LINC00939-202ENST00000507313 ABCA8O94911 1581 aa13.7□□□□□ -0.22
LINC00939-202ENST00000507313 KDM5BQ9UGL1 1544 aa13.7□□□□□ -0.22
LINC00939-202ENST00000507313 NUP153P49790 1475 aaKnown RBP13.7□□□□□ -0.22
LINC00939-202ENST00000507313 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
LINC00939-202ENST00000507313 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
LINC00939-202ENST00000507313 AEBP2Q6ZN18 517 aaPredicted RBP13.65□□□□□ -0.22
LINC00939-202ENST00000507313 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
LINC00939-202ENST00000507313 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
LINC00939-202ENST00000507313 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
LINC00939-202ENST00000507313 ABCC10Q5T3U5 1492 aa13.64□□□□□ -0.23
LINC00939-202ENST00000507313 EPRSP07814 1512 aaKnown RBP13.62□□□□□ -0.23
LINC00939-202ENST00000507313 MAPKBP1O60336 1514 aa13.62□□□□□ -0.23
LINC00939-202ENST00000507313 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
LINC00939-202ENST00000507313 WDR7Q9Y4E6 1490 aa13.62□□□□□ -0.23
LINC00939-202ENST00000507313 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
LINC00939-202ENST00000507313 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
LINC00939-202ENST00000507313 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
LINC00939-202ENST00000507313 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
LINC00939-202ENST00000507313 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
LINC00939-202ENST00000507313 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
LINC00939-202ENST00000507313 CD109Q6YHK3 1445 aa13.57□□□□□ -0.24
LINC00939-202ENST00000507313 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
LINC00939-202ENST00000507313 PCF11O94913 1555 aaKnown RBP13.56□□□□□ -0.24
LINC00939-202ENST00000507313 FYCO1Q9BQS8 1478 aa13.56□□□□□ -0.24
LINC00939-202ENST00000507313 HECW1Q76N89 1606 aa13.54□□□□□ -0.24
LINC00939-202ENST00000507313 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
LINC00939-202ENST00000507313 TROQ12816 1431 aaPredicted RBP13.52□□□□□ -0.24
LINC00939-202ENST00000507313 DIP2BQ9P265 1576 aa13.52□□□□□ -0.24
LINC00939-202ENST00000507313 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
LINC00939-202ENST00000507313 RAPGEF3O95398 923 aa13.48□□□□□ -0.25
LINC00939-202ENST00000507313 EFCAB2Q5VUJ9 269 aa13.48□□□□□ -0.25
LINC00939-202ENST00000507313 MAGI3Q5TCQ9 1506 aa13.47□□□□□ -0.25
LINC00939-202ENST00000507313 CFDP1Q9UEE9 299 aaPredicted RBP13.47□□□□□ -0.25
LINC00939-202ENST00000507313 TSPOAP1O95153 1857 aa13.45□□□□□ -0.26
LINC00939-202ENST00000507313 GLI2P10070 1586 aa13.45□□□□□ -0.26
LINC00939-202ENST00000507313 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
LINC00939-202ENST00000507313 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
LINC00939-202ENST00000507313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00939-202ENST00000507313 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
LINC00939-202ENST00000507313 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
LINC00939-202ENST00000507313 PLCH2O75038 1416 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms