RNA–Protein interactions for RNA: ENST00000507266.1

SDHA-207, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-207ENST00000507266 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
SDHA-207ENST00000507266 NUP160Q12769 1436 aa17.24■□□□□ 0.35
SDHA-207ENST00000507266 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
SDHA-207ENST00000507266 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
SDHA-207ENST00000507266 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
SDHA-207ENST00000507266 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
SDHA-207ENST00000507266 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
SDHA-207ENST00000507266 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
SDHA-207ENST00000507266 ADRA2BP18089 450 aa17.15■□□□□ 0.34
SDHA-207ENST00000507266 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
SDHA-207ENST00000507266 EEA1Q15075 1411 aa17.13■□□□□ 0.33
SDHA-207ENST00000507266 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
SDHA-207ENST00000507266 KIAA0586Q9BVV6 1533 aa17.13■□□□□ 0.33
SDHA-207ENST00000507266 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
SDHA-207ENST00000507266 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.32
SDHA-207ENST00000507266 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
SDHA-207ENST00000507266 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
SDHA-207ENST00000507266 CARMIL2Q6F5E8 1435 aa17.04■□□□□ 0.32
SDHA-207ENST00000507266 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
SDHA-207ENST00000507266 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
SDHA-207ENST00000507266 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
SDHA-207ENST00000507266 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
SDHA-207ENST00000507266 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
SDHA-207ENST00000507266 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
SDHA-207ENST00000507266 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
SDHA-207ENST00000507266 KIF21BO75037 1637 aa16.92■□□□□ 0.3
SDHA-207ENST00000507266 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
SDHA-207ENST00000507266 UGGT2Q9NYU1 1516 aa16.92■□□□□ 0.3
SDHA-207ENST00000507266 PTPRGP23470 1445 aa16.91■□□□□ 0.3
SDHA-207ENST00000507266 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
SDHA-207ENST00000507266 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
SDHA-207ENST00000507266 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
SDHA-207ENST00000507266 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
SDHA-207ENST00000507266 ADCY10Q96PN6 1610 aa16.81■□□□□ 0.28
SDHA-207ENST00000507266 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
SDHA-207ENST00000507266 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
SDHA-207ENST00000507266 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
SDHA-207ENST00000507266 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
SDHA-207ENST00000507266 UHRF1BP1LA0JNW5 1464 aa16.75■□□□□ 0.27
SDHA-207ENST00000507266 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
SDHA-207ENST00000507266 SAMD9Q5K651 1589 aa16.74■□□□□ 0.27
SDHA-207ENST00000507266 MAPKBP1O60336 1514 aa16.74■□□□□ 0.27
SDHA-207ENST00000507266 EFCAB5A4FU69 1503 aa16.73■□□□□ 0.27
SDHA-207ENST00000507266 KIF13AQ9H1H9 1805 aa16.7■□□□□ 0.26
SDHA-207ENST00000507266 ZCCHC11Q5TAX3 1644 aaKnown RBP16.68■□□□□ 0.26
SDHA-207ENST00000507266 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
SDHA-207ENST00000507266 FAM69CQ0P6D2 419 aa16.67■□□□□ 0.26
SDHA-207ENST00000507266 ABCA8O94911 1581 aa16.67■□□□□ 0.26
SDHA-207ENST00000507266 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
SDHA-207ENST00000507266 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
SDHA-207ENST00000507266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
SDHA-207ENST00000507266 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
SDHA-207ENST00000507266 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
SDHA-207ENST00000507266 FHOD3Q2V2M9 1422 aa16.63■□□□□ 0.25
SDHA-207ENST00000507266 ASXL2Q76L83 1435 aa16.63■□□□□ 0.25
SDHA-207ENST00000507266 DIP2BQ9P265 1576 aa16.63■□□□□ 0.25
SDHA-207ENST00000507266 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
SDHA-207ENST00000507266 FMN1Q68DA7 1419 aa16.6■□□□□ 0.25
SDHA-207ENST00000507266 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
SDHA-207ENST00000507266 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
SDHA-207ENST00000507266 ARHGAP35Q9NRY4 1499 aa16.55■□□□□ 0.24
SDHA-207ENST00000507266 WDR7Q9Y4E6 1490 aa16.55■□□□□ 0.24
SDHA-207ENST00000507266 GLI2P10070 1586 aa16.55■□□□□ 0.24
SDHA-207ENST00000507266 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
SDHA-207ENST00000507266 HECW1Q76N89 1606 aa16.53■□□□□ 0.24
SDHA-207ENST00000507266 EPRSP07814 1512 aaKnown RBP16.52■□□□□ 0.24
SDHA-207ENST00000507266 ATP10BO94823 1461 aa16.52■□□□□ 0.23
SDHA-207ENST00000507266 PLEKHD1A6NEE1 506 aa16.51■□□□□ 0.23
SDHA-207ENST00000507266 CLIP1P30622 1438 aa16.51■□□□□ 0.23
SDHA-207ENST00000507266 CFAP43Q8NDM7 1665 aa16.5■□□□□ 0.23
SDHA-207ENST00000507266 NUP153P49790 1475 aaKnown RBP16.49■□□□□ 0.23
SDHA-207ENST00000507266 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
SDHA-207ENST00000507266 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
SDHA-207ENST00000507266 MAP3K4Q9Y6R4 1608 aa16.48■□□□□ 0.23
SDHA-207ENST00000507266 KDM6BO15054 1643 aa16.45■□□□□ 0.22
SDHA-207ENST00000507266 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
SDHA-207ENST00000507266 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
SDHA-207ENST00000507266 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
SDHA-207ENST00000507266 CCDC18Q5T9S5 1454 aa16.41■□□□□ 0.22
SDHA-207ENST00000507266 PPRC1Q5VV67 1664 aaKnown RBP16.4■□□□□ 0.22
SDHA-207ENST00000507266 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
SDHA-207ENST00000507266 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
SDHA-207ENST00000507266 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
SDHA-207ENST00000507266 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
SDHA-207ENST00000507266 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
SDHA-207ENST00000507266 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
SDHA-207ENST00000507266 LRRIQ1Q96JM4 1722 aa16.36■□□□□ 0.21
SDHA-207ENST00000507266 KIF14Q15058 1648 aa16.34■□□□□ 0.21
SDHA-207ENST00000507266 CFAP74Q9C0B2 1584 aa16.33■□□□□ 0.2
SDHA-207ENST00000507266 PHLDB1Q86UU1 1377 aa16.32■□□□□ 0.2
SDHA-207ENST00000507266 MYO5CQ9NQX4 1742 aa16.31■□□□□ 0.2
SDHA-207ENST00000507266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
SDHA-207ENST00000507266 TROQ12816 1431 aaPredicted RBP16.29■□□□□ 0.2
SDHA-207ENST00000507266 NEO1Q92859 1461 aa16.27■□□□□ 0.19
SDHA-207ENST00000507266 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
SDHA-207ENST00000507266 APLP2Q06481 763 aa16.25■□□□□ 0.19
SDHA-207ENST00000507266 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
SDHA-207ENST00000507266 FANCAO15360 1455 aa16.24■□□□□ 0.19
SDHA-207ENST00000507266 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
SDHA-207ENST00000507266 ARAP3Q8WWN8 1544 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms