RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CTTNBP2Q8WZ74 1663 aa23.19■■□□□ 1.3
RNF4-208ENST00000507247 NUP160Q12769 1436 aa23.17■■□□□ 1.3
RNF4-208ENST00000507247 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
RNF4-208ENST00000507247 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
RNF4-208ENST00000507247 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
RNF4-208ENST00000507247 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
RNF4-208ENST00000507247 CLASP1Q7Z460 1538 aa23.07■■□□□ 1.28
RNF4-208ENST00000507247 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
RNF4-208ENST00000507247 TNIKQ9UKE5 1360 aa23.06■■□□□ 1.28
RNF4-208ENST00000507247 IQGAP2Q13576 1575 aa23.06■■□□□ 1.28
RNF4-208ENST00000507247 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
RNF4-208ENST00000507247 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
RNF4-208ENST00000507247 UGGT2Q9NYU1 1516 aa22.94■■□□□ 1.26
RNF4-208ENST00000507247 RANGAP1P46060 587 aaPredicted RBP22.91■■□□□ 1.26
RNF4-208ENST00000507247 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
RNF4-208ENST00000507247 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
RNF4-208ENST00000507247 SAMD9Q5K651 1589 aa22.89■■□□□ 1.25
RNF4-208ENST00000507247 CLIP1P30622 1438 aa22.86■■□□□ 1.25
RNF4-208ENST00000507247 DISP1Q96F81 1524 aa22.86■■□□□ 1.25
RNF4-208ENST00000507247 KIAA0556O60303 1618 aa22.85■■□□□ 1.25
RNF4-208ENST00000507247 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
RNF4-208ENST00000507247 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
RNF4-208ENST00000507247 EFCAB5A4FU69 1503 aa22.84■■□□□ 1.25
RNF4-208ENST00000507247 PRG4Q92954 1404 aaPredicted RBP22.83■■□□□ 1.25
RNF4-208ENST00000507247 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
RNF4-208ENST00000507247 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
RNF4-208ENST00000507247 CARMIL2Q6F5E8 1435 aa22.76■■□□□ 1.23
RNF4-208ENST00000507247 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
RNF4-208ENST00000507247 FHOD3Q2V2M9 1422 aa22.75■■□□□ 1.23
RNF4-208ENST00000507247 TTBK1Q5TCY1 1321 aaPredicted RBP22.61■■□□□ 1.21
RNF4-208ENST00000507247 PTPRGP23470 1445 aa22.61■■□□□ 1.21
RNF4-208ENST00000507247 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
RNF4-208ENST00000507247 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
RNF4-208ENST00000507247 PCF11O94913 1555 aaKnown RBP22.58■■□□□ 1.2
RNF4-208ENST00000507247 ABCA8O94911 1581 aa22.55■■□□□ 1.2
RNF4-208ENST00000507247 PLB1Q6P1J6 1458 aa22.55■■□□□ 1.2
RNF4-208ENST00000507247 RAPGEF6Q8TEU7 1601 aa22.55■■□□□ 1.2
RNF4-208ENST00000507247 CASKIN1Q8WXD9 1431 aa22.5■■□□□ 1.19
RNF4-208ENST00000507247 LRRIQ1Q96JM4 1722 aa22.5■■□□□ 1.19
RNF4-208ENST00000507247 UACAQ9BZF9 1416 aa22.49■■□□□ 1.19
RNF4-208ENST00000507247 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
RNF4-208ENST00000507247 FYCO1Q9BQS8 1478 aa22.48■■□□□ 1.19
RNF4-208ENST00000507247 ABCC2Q92887 1545 aa22.47■■□□□ 1.19
RNF4-208ENST00000507247 ADCY10Q96PN6 1610 aa22.47■■□□□ 1.19
RNF4-208ENST00000507247 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
RNF4-208ENST00000507247 NUP153P49790 1475 aaKnown RBP22.46■■□□□ 1.19
RNF4-208ENST00000507247 UHRF1BP1LA0JNW5 1464 aa22.45■■□□□ 1.18
RNF4-208ENST00000507247 ATP1B4Q9UN42 357 aaPredicted RBP22.4■■□□□ 1.18
RNF4-208ENST00000507247 EPRSP07814 1512 aaKnown RBP22.39■■□□□ 1.17
RNF4-208ENST00000507247 CDK13Q14004 1512 aaKnown RBP22.38■■□□□ 1.17
RNF4-208ENST00000507247 CFAP43Q8NDM7 1665 aa22.37■■□□□ 1.17
RNF4-208ENST00000507247 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
RNF4-208ENST00000507247 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
RNF4-208ENST00000507247 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
RNF4-208ENST00000507247 ATP10BO94823 1461 aa22.34■■□□□ 1.17
RNF4-208ENST00000507247 CCDC18Q5T9S5 1454 aa22.34■■□□□ 1.17
RNF4-208ENST00000507247 TIAM1Q13009 1591 aa22.33■■□□□ 1.17
RNF4-208ENST00000507247 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
RNF4-208ENST00000507247 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
RNF4-208ENST00000507247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
RNF4-208ENST00000507247 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
RNF4-208ENST00000507247 APLP2Q06481 763 aa22.23■■□□□ 1.15
RNF4-208ENST00000507247 KANK4Q5T7N3 995 aaPredicted RBP22.21■■□□□ 1.15
RNF4-208ENST00000507247 LRRC9Q6ZRR7 1453 aa22.21■■□□□ 1.15
RNF4-208ENST00000507247 NPM1P06748 294 aaKnown RBP eCLIP22.19■■□□□ 1.14
RNF4-208ENST00000507247 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
RNF4-208ENST00000507247 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
RNF4-208ENST00000507247 ASXL2Q76L83 1435 aa22.17■■□□□ 1.14
RNF4-208ENST00000507247 MTUS2Q5JR59 1369 aa22.16■■□□□ 1.14
RNF4-208ENST00000507247 TROQ12816 1431 aaPredicted RBP22.15■■□□□ 1.14
RNF4-208ENST00000507247 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
RNF4-208ENST00000507247 WDR7Q9Y4E6 1490 aa22.15■■□□□ 1.14
RNF4-208ENST00000507247 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.13
RNF4-208ENST00000507247 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.13
RNF4-208ENST00000507247 KIF14Q15058 1648 aa22.13■■□□□ 1.13
RNF4-208ENST00000507247 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
RNF4-208ENST00000507247 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.13
RNF4-208ENST00000507247 NCOA2Q15596 1464 aa22.05■■□□□ 1.12
RNF4-208ENST00000507247 KCNH8Q96L42 1107 aa22.04■■□□□ 1.12
RNF4-208ENST00000507247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.04■■□□□ 1.12
RNF4-208ENST00000507247 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
RNF4-208ENST00000507247 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
RNF4-208ENST00000507247 DIP2BQ9P265 1576 aa22.02■■□□□ 1.12
RNF4-208ENST00000507247 ABCA9Q8IUA7 1624 aa22.01■■□□□ 1.11
RNF4-208ENST00000507247 CDC42BPAQ5VT25 1732 aa21.99■■□□□ 1.11
RNF4-208ENST00000507247 PHLDB1Q86UU1 1377 aa21.98■■□□□ 1.11
RNF4-208ENST00000507247 GLI2P10070 1586 aa21.97■■□□□ 1.11
RNF4-208ENST00000507247 MYO5CQ9NQX4 1742 aa21.96■■□□□ 1.11
RNF4-208ENST00000507247 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.1
RNF4-208ENST00000507247 PREX2Q70Z35 1606 aa21.94■■□□□ 1.1
RNF4-208ENST00000507247 MAP3K4Q9Y6R4 1608 aa21.94■■□□□ 1.1
RNF4-208ENST00000507247 CDC42BPBQ9Y5S2 1711 aa21.94■■□□□ 1.1
RNF4-208ENST00000507247 GPATCH8Q9UKJ3 1502 aaKnown RBP21.92■■□□□ 1.1
RNF4-208ENST00000507247 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
RNF4-208ENST00000507247 MYOM3Q5VTT5 1437 aa21.91■■□□□ 1.1
RNF4-208ENST00000507247 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
RNF4-208ENST00000507247 PLCH2O75038 1416 aa21.86■■□□□ 1.09
RNF4-208ENST00000507247 CD109Q6YHK3 1445 aa21.86■■□□□ 1.09
RNF4-208ENST00000507247 TSPOAP1O95153 1857 aa21.86■■□□□ 1.09
RNF4-208ENST00000507247 PPRC1Q5VV67 1664 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms