RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 UBTFP17480 764 aaKnown RBP18.23■□□□□ 0.51
TRIM23-205ENST00000506400 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
TRIM23-205ENST00000506400 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
TRIM23-205ENST00000506400 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
TRIM23-205ENST00000506400 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
TRIM23-205ENST00000506400 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
TRIM23-205ENST00000506400 JPH4Q96JJ6 628 aa18.15■□□□□ 0.5
TRIM23-205ENST00000506400 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
TRIM23-205ENST00000506400 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
TRIM23-205ENST00000506400 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
TRIM23-205ENST00000506400 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
TRIM23-205ENST00000506400 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
TRIM23-205ENST00000506400 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
TRIM23-205ENST00000506400 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
TRIM23-205ENST00000506400 EFCAB5A4FU69 1503 aa18■□□□□ 0.47
TRIM23-205ENST00000506400 DISP1Q96F81 1524 aa18■□□□□ 0.47
TRIM23-205ENST00000506400 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
TRIM23-205ENST00000506400 SAMD9Q5K651 1589 aa17.98■□□□□ 0.47
TRIM23-205ENST00000506400 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
TRIM23-205ENST00000506400 CLIP1P30622 1438 aa17.98■□□□□ 0.47
TRIM23-205ENST00000506400 CEP162Q5TB80 1403 aa17.97■□□□□ 0.47
TRIM23-205ENST00000506400 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
TRIM23-205ENST00000506400 ARHGAP35Q9NRY4 1499 aa17.95■□□□□ 0.46
TRIM23-205ENST00000506400 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
TRIM23-205ENST00000506400 RIMBP3CA6NJZ7 1639 aa17.93■□□□□ 0.46
TRIM23-205ENST00000506400 RIMBP3BA6NNM3 1639 aa17.93■□□□□ 0.46
TRIM23-205ENST00000506400 RIMBP3Q9UFD9 1639 aa17.93■□□□□ 0.46
TRIM23-205ENST00000506400 PTPRGP23470 1445 aa17.91■□□□□ 0.46
TRIM23-205ENST00000506400 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.45
TRIM23-205ENST00000506400 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
TRIM23-205ENST00000506400 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
TRIM23-205ENST00000506400 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
TRIM23-205ENST00000506400 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
TRIM23-205ENST00000506400 UACAQ9BZF9 1416 aa17.8■□□□□ 0.44
TRIM23-205ENST00000506400 ABCA8O94911 1581 aa17.77■□□□□ 0.44
TRIM23-205ENST00000506400 UHRF1BP1LA0JNW5 1464 aa17.76■□□□□ 0.43
TRIM23-205ENST00000506400 PLB1Q6P1J6 1458 aa17.76■□□□□ 0.43
TRIM23-205ENST00000506400 VPS8Q8N3P4 1428 aa17.74■□□□□ 0.43
TRIM23-205ENST00000506400 ABCC2Q92887 1545 aa17.74■□□□□ 0.43
TRIM23-205ENST00000506400 RAPGEF6Q8TEU7 1601 aa17.74■□□□□ 0.43
TRIM23-205ENST00000506400 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
TRIM23-205ENST00000506400 FYCO1Q9BQS8 1478 aa17.7■□□□□ 0.42
TRIM23-205ENST00000506400 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
TRIM23-205ENST00000506400 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRIM23-205ENST00000506400 ATP1B4Q9UN42 357 aaPredicted RBP17.7■□□□□ 0.42
TRIM23-205ENST00000506400 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
TRIM23-205ENST00000506400 PCF11O94913 1555 aaKnown RBP17.69■□□□□ 0.42
TRIM23-205ENST00000506400 NUP153P49790 1475 aaKnown RBP17.68■□□□□ 0.42
TRIM23-205ENST00000506400 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
TRIM23-205ENST00000506400 ATP10BO94823 1461 aa17.63■□□□□ 0.41
TRIM23-205ENST00000506400 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
TRIM23-205ENST00000506400 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
TRIM23-205ENST00000506400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
TRIM23-205ENST00000506400 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
TRIM23-205ENST00000506400 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
TRIM23-205ENST00000506400 ZCCHC11Q5TAX3 1644 aaKnown RBP17.6■□□□□ 0.41
TRIM23-205ENST00000506400 APLP2Q06481 763 aa17.59■□□□□ 0.41
TRIM23-205ENST00000506400 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
TRIM23-205ENST00000506400 CDK13Q14004 1512 aaKnown RBP17.57■□□□□ 0.4
TRIM23-205ENST00000506400 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
TRIM23-205ENST00000506400 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
TRIM23-205ENST00000506400 MAPKBP1O60336 1514 aa17.56■□□□□ 0.4
TRIM23-205ENST00000506400 ASXL2Q76L83 1435 aa17.54■□□□□ 0.4
TRIM23-205ENST00000506400 LRRIQ1Q96JM4 1722 aa17.53■□□□□ 0.4
TRIM23-205ENST00000506400 TIAM1Q13009 1591 aa17.52■□□□□ 0.39
TRIM23-205ENST00000506400 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
TRIM23-205ENST00000506400 CFAP43Q8NDM7 1665 aa17.5■□□□□ 0.39
TRIM23-205ENST00000506400 TROQ12816 1431 aaPredicted RBP17.49■□□□□ 0.39
TRIM23-205ENST00000506400 MTUS2Q5JR59 1369 aa17.49■□□□□ 0.39
TRIM23-205ENST00000506400 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
TRIM23-205ENST00000506400 EHBP1L1Q8N3D4 1523 aa17.45■□□□□ 0.38
TRIM23-205ENST00000506400 MAGI3Q5TCQ9 1506 aa17.44■□□□□ 0.38
TRIM23-205ENST00000506400 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
TRIM23-205ENST00000506400 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
TRIM23-205ENST00000506400 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
TRIM23-205ENST00000506400 KIF14Q15058 1648 aa17.4■□□□□ 0.38
TRIM23-205ENST00000506400 FAM69CQ0P6D2 419 aa17.39■□□□□ 0.37
TRIM23-205ENST00000506400 GLI2P10070 1586 aa17.39■□□□□ 0.37
TRIM23-205ENST00000506400 DIP2BQ9P265 1576 aa17.38■□□□□ 0.37
TRIM23-205ENST00000506400 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
TRIM23-205ENST00000506400 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
TRIM23-205ENST00000506400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM23-205ENST00000506400 SUPT6HQ7KZ85 1726 aaKnown RBP17.35■□□□□ 0.37
TRIM23-205ENST00000506400 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
TRIM23-205ENST00000506400 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
TRIM23-205ENST00000506400 CD109Q6YHK3 1445 aa17.32■□□□□ 0.36
TRIM23-205ENST00000506400 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
TRIM23-205ENST00000506400 PPARGC1BQ86YN6 1023 aaKnown RBP17.31■□□□□ 0.36
TRIM23-205ENST00000506400 TTC37Q6PGP7 1564 aa17.3■□□□□ 0.36
TRIM23-205ENST00000506400 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
TRIM23-205ENST00000506400 PLCH2O75038 1416 aa17.29■□□□□ 0.36
TRIM23-205ENST00000506400 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
TRIM23-205ENST00000506400 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.36
TRIM23-205ENST00000506400 ARAP3Q8WWN8 1544 aa17.26■□□□□ 0.35
TRIM23-205ENST00000506400 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
TRIM23-205ENST00000506400 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
TRIM23-205ENST00000506400 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
TRIM23-205ENST00000506400 ITSN2Q9NZM3 1697 aa17.24■□□□□ 0.35
TRIM23-205ENST00000506400 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
TRIM23-205ENST00000506400 PREX2Q70Z35 1606 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms